Basic Information

Gene Symbol
gatad1
Assembly
GCA_037043255.1
Location
CM073319.1:6873623-6874528[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.3e-09 2.7e-05 23.8 4.3 1 26 9 32 9 38 0.90

Sequence Information

Coding Sequence
ATGCCTCTCGGTGAAAAACCCGAATGCGTACGATGCGGAACTCGAGAAACTCCTTTGTGGCATGCGACCGATGCAGGCAGTTTGTGCAATTCTTGTCTCGAGGACGAAAGAAAtctgaacgatgcaaacacgatgataaaaaatgaagatgagGATAAAAATAGCACGAATGGTAAACCCTCGAGAAAAAGTACGAGAATTACGAGATACTGTAAACCTAAAGGACCTACAAACGGAGCTGCCCTTAAAACAGTCCCCAAGGGCAAAGGTCGTCGccacatttttaaaaaacagCCTATAAAAGCTCCGTCCGCAGTGGCAACTCCGGTCACTAGTAACTTTGTATTTTACAAAGGATCGTATTTTCAAGCCGGCGACATAGTATCCATGGAAGATATCGACGGAGGAATTTATTATGCTCAAATTCGAGGATTGTTGACCGATCAATATTGCGAAAAAAGCGCCGCAGTGACGTGGTTGTTGCCCACGACGTCcagtcctcCGCCGTACCAAGGATTCAGCCCGGAAACTTACATCATAGGACCGGAAGAAGATTTGCCGCGCAAGTTGGACTGCATGGAATTTGTGATGCACGCACCGTCCGACTATTACAAACTCAAAAACACTCCTTACCCTCCCCCGCTGACAGAAACTGGGGCGGGATACATTTGGACGTCGCTGAGGAACGAGCTCAACGCAGTGAAGAAGTAA
Protein Sequence
MPLGEKPECVRCGTRETPLWHATDAGSLCNSCLEDERNLNDANTMIKNEDEDKNSTNGKPSRKSTRITRYCKPKGPTNGAALKTVPKGKGRRHIFKKQPIKAPSAVATPVTSNFVFYKGSYFQAGDIVSMEDIDGGIYYAQIRGLLTDQYCEKSAAVTWLLPTTSSPPPYQGFSPETYIIGPEEDLPRKLDCMEFVMHAPSDYYKLKNTPYPPPLTETGAGYIWTSLRNELNAVKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00460167;
90% Identity
iTF_00829158;
80% Identity
-