Dfen002274.1
Basic Information
- Insect
- Diadegma fenestrale
- Gene Symbol
- -
- Assembly
- GCA_037043255.1
- Location
- CM073309.1:35349826-35351277[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.8e-08 4.4e-05 23.3 0.0 2 38 16 52 15 57 0.90
Sequence Information
- Coding Sequence
- ATGCCGCGTCATCGAGAGAGAACGACCAACAAGGGACGATGGACGAAAGAAGATTTGGAGAATgcgagaaaatcgataatcgaAGCGAAATGTTCGATGCGCGTGGCGTCGAAAAAGTACGGCATACCTTTTGCGACGCTGCAGAGGCGAATGAAGATGGATTCGGAGACGGTGGCTTCGGGTCCGTCGATGGGTCGGAAGGCGGTTCTGAGTCCggcgcaagaaaaaatgatggtcgATTCGATAGAGAGGCTCGGGGAGTTGTTTTACGGTTTGAATTGTCAGCAAATACGATATTTGGCGTACGAATTTGCCGAGAGGCAGAGCATAATGCACAATTtcaacaaagagaaaaaatgcgcGGGGCGCGATTGGTTGGATGGTTTTTTGAAGCGAAATCCGACGGTCAGAACTCGCAAGCCGGAGCCTACGACGTCGACGGCAAAAATAGCGGCGTTCAATTATCAGGACGTGTCGGCGTTctttgaaaagttggaaaacgTAACGAGGGAGAATTATTTTGAGGCGTCGAGAATATTCGCGGTTGACGAGACCGTGATAACGACGATACTCGAGGCCGGAACGCTGGGTATTCCAGGGGCTCATATCGAGAGGCCAAAAGCCAAGGGAGGGGGTGAGGATCGTGGGAAAAACGTGACAATCGTGCTGGGGATGAACGCAGCTGGAATTTACGTTCCGCCCATGTTTATTTTCCCTCGTCAACGCATGTCCCAACAATTGTCACAGAAAGGACCGACAGACGCGATTTATCAATGCGTCAAAGACGGCTCCATTAATTCGACCTTGTTTTTGATCTGGTTGGTGCATTTCAAGGAGCATGTCAAGCCTACCAATCAACATCCTTGTTTGCTCATTCTTGACAATCACCTGAGTCACGTGTCCCTCAAAATCCTCGATTTTTGTAACAAACACGGCATCATTTTGCTTCCCGTACCTCCGCACACGTCGCATCGGTTGCAGCCCTTAAACGTCGCCTTTTACGGGCCCCTGAAAAAAGCTTTCAAAAAAGAATGCGATTCATTCATGACCAGCCaatccttgaaaaatatcACGCAGTACGAATTGGCCCAAGTTTTCGACAAAGCGTACACCTCCGTCGCGGACCCTTTGAAAGCTCTTACCGGATTTCGCGTCACAGGAATCTATCCAATAAACCGAGCAGTCTTCACCACCGACGACTTCGTTTCACCCAAAGCTCTACAATTAGCAACAAACACTTCAAACTCCCAAGAAAGCTGCATTCCCATCACAGCCACCAGCCAACCTTCCATGGGTCATTTCCTTTACAACATCGCTGATAATCAACCAATCGACCTCCCTCATTCTTCCACAACAAACATGCAAATGCAGTTGTGCAGCGAAGCCAACGTCGAGCACAATTCCTTCAAACCTTTCCCACACACATCCACCGGCGATCCCGTTGTCTATTGA
- Protein Sequence
- MPRHRERTTNKGRWTKEDLENARKSIIEAKCSMRVASKKYGIPFATLQRRMKMDSETVASGPSMGRKAVLSPAQEKMMVDSIERLGELFYGLNCQQIRYLAYEFAERQSIMHNFNKEKKCAGRDWLDGFLKRNPTVRTRKPEPTTSTAKIAAFNYQDVSAFFEKLENVTRENYFEASRIFAVDETVITTILEAGTLGIPGAHIERPKAKGGGEDRGKNVTIVLGMNAAGIYVPPMFIFPRQRMSQQLSQKGPTDAIYQCVKDGSINSTLFLIWLVHFKEHVKPTNQHPCLLILDNHLSHVSLKILDFCNKHGIILLPVPPHTSHRLQPLNVAFYGPLKKAFKKECDSFMTSQSLKNITQYELAQVFDKAYTSVADPLKALTGFRVTGIYPINRAVFTTDDFVSPKALQLATNTSNSQESCIPITATSQPSMGHFLYNIADNQPIDLPHSSTTNMQMQLCSEANVEHNSFKPFPHTSTGDPVVY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01306378;
- 90% Identity
- iTF_00828706; iTF_00266382; iTF_00265608; iTF_00262584; iTF_00829422; iTF_00263375;
- 80% Identity
- -