Dfen001162.1
Basic Information
- Insect
- Diadegma fenestrale
- Gene Symbol
- -
- Assembly
- GCA_037043255.1
- Location
- CM073309.1:18061488-18062051[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-13 6.2e-10 38.8 0.1 5 38 19 52 18 55 0.93 2 2 8.1 7.4e+03 -3.1 0.0 5 14 60 66 59 68 0.57
Sequence Information
- Coding Sequence
- ATGGTTCATCAATATAAAAGAAATACGAATCAACAGTCATGGAAGAAAATATCAATGGCGAAAGCCATTCGAAAAGTCACCGATGGAGAATTATCTCTTCAAGAAGCTGCTGAGCGCTATAACGTTCCAAGATCGACACTTGCTCGACGAGCGAAAACGTTCAAGCTCAATCCTGACATGGAATTAGCGGTTCAAAGTGGTTTAGGAAGGTTCAAAACTACCTTTAACCCCGAACAAGAACGACCGATGATcgaatatttgaaggaaatggAAGAGAAATTCCACGGACTCACTCCTCGAGAGTTTATAGGACTCTGGCATATCAAATag
- Protein Sequence
- MVHQYKRNTNQQSWKKISMAKAIRKVTDGELSLQEAAERYNVPRSTLARRAKTFKLNPDMELAVQSGLGRFKTTFNPEQERPMIEYLKEMEEKFHGLTPREFIGLWHIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00829407;
- 90% Identity
- -
- 80% Identity
- -