Basic Information

Gene Symbol
XBP1
Assembly
GCA_037043255.1
Location
CM073312.1:8012463-8014987[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.5e-15 7.2e-12 45.3 17.7 2 61 91 150 91 163 0.95
2 2 3.8 3.7e+03 -1.8 0.4 35 48 210 223 207 226 0.67

Sequence Information

Coding Sequence
ATGTGCGCATTAAAGAGCGTGTTGATAACATTGCCTAAGAGCCTGTCCAAGATCCAAAGTGGCTCAGAGCCGAGTGGCCCCGAGAAGGAAACTGCGGCATTCAAGTTTGCTGCGTCTTTGCTGGCTCCTCAAAGAAGAACGGACATGGAAGACAACAAATCGTTGATCAAGCATCATCTGGAAGACAGCATGTCGTTGGACGAGGAAGAAATGATAAAACCTGAGCTATGGCTCAGAGGGAAGAAGCGAAGATTGGATCATCTCACctgggaagaaaaattacaaagaaaGAAGTTGAAGAATCGAGTGGCAGCCCAAACGTCGAGGGATCGGAAAAAGGCAAAGCTGGACGAATTGGAAGACACGGTGAAAGCATTGAGAGAGAGTAACGAAAGATTGACGCAAGAATGTTCGCTTTTGAGGGCTCAGAACGAGAGTCTGCTGACGGAATCGGAGAGATTGAGAGCGGAGACAAAAGCTAGAAACGTCGACAGGACAAGGTGGGGCAGCACAACCGGCATCGTCACCGACCCCATCGAACAAAAACGCCTCGATTATCCTGAAGATAATGACGCTTTACCTCCTCTCGAGGAACTGTTCGGCGAACTCCAAGGAGACGAGtacattgaaaaacttgaagaaCTCGCCGAAAGCCTTCTGCGAGAAGTTACCGCAGAAGTGGAAGCGAGCGCTTGTCGAACAGGCGAACAGGTATCgctcgaacaaaatatcgctgAAGAATCTGACGATACAGAAAGAATGGTGGGGAAGACACCAGAAAATGTGGAAACCGGTAGAGCCGTCCACGGCATAAACAACAATAATTGTCGTCGAAACGCAAATGTCCATCAGCGAAGATCATCCGCAAGCGTATTATCTTTACCGACGAATTCAACGAGAACGCTGAAGCCAAGAAAGACGATAACGGACCAACAGATTATCCCGGAACTCGGCAATTCCCAAATTCCATTGAAGAGCATCGGGGGCGAGAGATTGTGTCTCAAGCCCGAAGTTCGAGTGAAGGAGGAGCCGGTGAACGATATGGACACTGTTTACGGCACTTACGACGAAGCGACTAATTGCATTACGATTATTTATCCCGACGACAGCGTCGGGATACAAGAGTGTGTCCAAGAAGTCAGCAGCACGATAAACGAAACTTTCGATGAAACGAgccacgaaaaatcaaaaaatcttcaaactccCAACAATTGCCTCGAAAACACGAAGAATTATCTCTCACCGGCTTACACAGTCACTGATTCAATTCCATCACCAATGAGCATGAATTCCGAAGAATCAGAACCCGGAATAGTCAATTCTTACGCCATGGAGTGCGCTTCGCTTTCCGATTACGGTTACGAGTCCCACGACTCGCCGCAACAATCGATGCTCCATGAAAAGTCTTCTCGACTCGGTAGCGCCACCGGAAACGCGAATCTCGTCAATGCCTGTTCCCTCACGGACCTCTGGCACGAAAGTTTTTCCGAATTATTTCCGAGTCTcgtttaa
Protein Sequence
MCALKSVLITLPKSLSKIQSGSEPSGPEKETAAFKFAASLLAPQRRTDMEDNKSLIKHHLEDSMSLDEEEMIKPELWLRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEDTVKALRESNERLTQECSLLRAQNESLLTESERLRAETKARNVDRTRWGSTTGIVTDPIEQKRLDYPEDNDALPPLEELFGELQGDEYIEKLEELAESLLREVTAEVEASACRTGEQVSLEQNIAEESDDTERMVGKTPENVETGRAVHGINNNNCRRNANVHQRRSSASVLSLPTNSTRTLKPRKTITDQQIIPELGNSQIPLKSIGGERLCLKPEVRVKEEPVNDMDTVYGTYDEATNCITIIYPDDSVGIQECVQEVSSTINETFDETSHEKSKNLQTPNNCLENTKNYLSPAYTVTDSIPSPMSMNSEESEPGIVNSYAMECASLSDYGYESHDSPQQSMLHEKSSRLGSATGNANLVNACSLTDLWHESFSELFPSLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
iTF_00829234;
80% Identity
-