Basic Information

Insect: Diachasmimorpha longicaudata
Gene Symbol: -
Assembly: GCA_034640455.1
Location: CM067946.1:9419651-9421129[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0021 0.17 12.5 0.4 7 23 108 124 99 124 0.91

2 7 0.00011 0.0087 16.5 0.1 2 23 141 162 141 162 0.97

3 7 4.9e-05 0.0039 17.6 4.1 1 23 176 198 176 198 0.98

4 7 0.001 0.083 13.4 0.6 3 23 207 227 206 227 0.96

5 7 8.8e-05 0.0071 16.8 0.3 2 23 286 307 285 307 0.94

6 7 0.00015 0.012 16.1 2.6 3 23 315 335 313 335 0.98

7 7 0.00042 0.034 14.6 4.4 1 23 341 364 341 364 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0021	0.17	12.5	0.4	7	23	108	124	99	124	0.91
2	7	0.00011	0.0087	16.5	0.1	2	23	141	162	141	162	0.97
3	7	4.9e-05	0.0039	17.6	4.1	1	23	176	198	176	198	0.98
4	7	0.001	0.083	13.4	0.6	3	23	207	227	206	227	0.96
5	7	8.8e-05	0.0071	16.8	0.3	2	23	286	307	285	307	0.94
6	7	0.00015	0.012	16.1	2.6	3	23	315	335	313	335	0.98
7	7	0.00042	0.034	14.6	4.4	1	23	341	364	341	364	0.97

Sequence Information

Coding Sequence: ATGGAGACAGAGTCAATCACTCTGGCTCCCCAGACCATCCACGTGGGTCCAATCGTGCACCCCATCTCAAATGAAACAATATCCATTGTGATTCCATTGTCAGCACAATTGGCAACAGTGGCACGTGTCCAGACAATTGAGTCCGCCGAAGTGATTCCTGAAAAATCAGAGACAACTCCAGAGCTCCAGCCGATGGTCTCAGTGGAAGTGAGCCTGTCTCCCGCAACCTCAGGAACCACTGAAACCAAGCCAGACCTGGCTACCGCCCTTCAGAAGGCAGACAAAACCAAGGGCTGTCCCTTTCCCACGTGCTCGCGATATGGACGAGCCTTCTCAAGGGCTCACGACCTAAAACGTCATATCGCGAGGCATGAAACGAGGAAGGAGAGACTGTGTGAGCCGATGCAAACGGATGTCCGCACGTGCGGTCAATGCGGAGAAAGCTTCATCAATGATATTGTTCTTCAACGGCACATGAAGATTCATGTCAAGGCTGGGGAGGAGGGAGGTACTGATGCGAAGGTCTATCCATGCCACTTGTGCAAAAAGAAGTATACACAGTTCAGTAAACTTCGGGCACATGTGACGACTCATGATAAGAAATCCTCCGACAACATGTGTGCATTATGCGGTGTCAAATGTGAAACTGAAGAGAACCTAGAGACACACATGAAGGACCACACAACGAGCATCCTCGAGGCGCAAGAAGCCCTCGAATCCACAGTGGATCCGGCCCCTGTGAAGATGGAAGAGGACGATGACGACGATTTCCTTCTAGAGGAGATGCTACTCATCAACAAGGGTCCTCGCCTACCCCCAAAGACGGAATCCACAACCACGTCGGACGGAAAAATCCGCTGTGACTATTGCGCGAAGACCTTCAAAACCAAATGGACCCTGAGCTCTCACGTAGCTGCTCACGAGGGCCGCTTTCAGTTTGGATGTTCCaggtgtggaaaaaaattcgttaGGAAGAGCCACTACGACGGTCATGTGCGCTCTCATGAAGCAGCTAGGCCCTATGTTTGTGAGCAATGCGGAAAGACATTCAAAGAACTCAAACATCGACGTGAACACACGAAACGAAAACATCCGAGCAATCGAAATGACGTACAAAACCTTCTAGACAGCATCAGTGCTTATGTGGCTGAAGAATCCTCAATGGAACAGACTAAATTCACACTTCTTATGCCTGTGAACTTTCCCGCATAA
Protein Sequence: METESITLAPQTIHVGPIVHPISNETISIVIPLSAQLATVARVQTIESAEVIPEKSETTPELQPMVSVEVSLSPATSGTTETKPDLATALQKADKTKGCPFPTCSRYGRAFSRAHDLKRHIARHETRKERLCEPMQTDVRTCGQCGESFINDIVLQRHMKIHVKAGEEGGTDAKVYPCHLCKKKYTQFSKLRAHVTTHDKKSSDNMCALCGVKCETEENLETHMKDHTTSILEAQEALESTVDPAPVKMEEDDDDDFLLEEMLLINKGPRLPPKTESTTTSDGKIRCDYCAKTFKTKWTLSSHVAAHEGRFQFGCSRCGKKFVRKSHYDGHVRSHEAARPYVCEQCGKTFKELKHRREHTKRKHPSNRNDVQNLLDSISAYVAEESSMEQTKFTLLMPVNFPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01273331;
90% Identity: -
80% Identity: -