Basic Information

Insect: Diachasmimorpha longicaudata
Gene Symbol: -
Assembly: GCA_034640455.1
Location: CM067964.1:2315482-2329404[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.4 1.1e+02 3.6 0.4 1 7 56 62 56 64 0.89

2 15 0.00059 0.047 14.2 5.3 1 21 79 99 79 100 0.94

3 15 0.00052 0.042 14.4 3.0 1 23 108 131 108 131 0.97

4 15 0.0003 0.024 15.1 5.1 1 21 164 184 164 185 0.92

5 15 7.4e-05 0.0059 17.0 2.4 1 21 206 226 206 227 0.94

6 15 0.00017 0.014 15.9 4.8 1 21 259 279 259 280 0.93

7 15 0.0012 0.095 13.2 5.1 1 23 288 311 288 311 0.97

8 15 2.1e-05 0.0017 18.7 1.9 1 21 359 379 359 380 0.94

9 15 0.00011 0.0086 16.5 2.2 1 23 388 411 388 411 0.97

10 15 0.075 6 7.6 1.2 1 21 451 471 451 472 0.87

11 15 1.4 1.1e+02 3.6 4.7 1 23 480 502 480 503 0.90

12 15 0.065 5.2 7.8 4.2 1 21 559 579 559 584 0.93

13 15 0.0019 0.15 12.6 2.0 1 23 588 611 588 611 0.98

14 15 0.017 1.4 9.6 1.1 1 20 652 671 652 673 0.94

15 15 0.001 0.084 13.4 1.6 1 23 681 704 681 704 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.4	1.1e+02	3.6	0.4	1	7	56	62	56	64	0.89
2	15	0.00059	0.047	14.2	5.3	1	21	79	99	79	100	0.94
3	15	0.00052	0.042	14.4	3.0	1	23	108	131	108	131	0.97
4	15	0.0003	0.024	15.1	5.1	1	21	164	184	164	185	0.92
5	15	7.4e-05	0.0059	17.0	2.4	1	21	206	226	206	227	0.94
6	15	0.00017	0.014	15.9	4.8	1	21	259	279	259	280	0.93
7	15	0.0012	0.095	13.2	5.1	1	23	288	311	288	311	0.97
8	15	2.1e-05	0.0017	18.7	1.9	1	21	359	379	359	380	0.94
9	15	0.00011	0.0086	16.5	2.2	1	23	388	411	388	411	0.97
10	15	0.075	6	7.6	1.2	1	21	451	471	451	472	0.87
11	15	1.4	1.1e+02	3.6	4.7	1	23	480	502	480	503	0.90
12	15	0.065	5.2	7.8	4.2	1	21	559	579	559	584	0.93
13	15	0.0019	0.15	12.6	2.0	1	23	588	611	588	611	0.98
14	15	0.017	1.4	9.6	1.1	1	20	652	671	652	673	0.94
15	15	0.001	0.084	13.4	1.6	1	23	681	704	681	704	0.98

Sequence Information

Coding Sequence: ATGTTGCAGGGCCAACGTCTACGAAGAAAACCACTGGCTCTCATCTTCGTTCGTCGCCATTTTCGCCTCCGAAATCATCAGGAACATCCGGAGGAAGAGCCTTTCAACGGTCAAGGACGACTTCCTGAACCTCCGAAGAAGAGTAAATGTGAAGGGACAAAGAGATTTCGGTGTCCGCACTGCgGAATACCCGAGTGGGAGTTTATCGCTGTGAACTACGATATATCGAATCGCCATCACTGCCCGACGTGCCAGAGGAGCTACAAACGTCGAACTCATCTTCTTCGTCATCTGAAGAACGAGTGCGGAATAGCGAAAGCTTTTCAATGCCCCTATTGCATGCAGAGCTTTCGACAACGGACCCACATCTGGACCCACATCAGGCAGAATCACACTGACTCCGTCCTTTACTGTGCCCCAAGGAAGTGGGAGTTTATCGATGTGGATCAGGGACCAGGACATGCTGGAGATCATCCAGCTGTCGATCGTCATCACTGTCCACAGTGCGGAAGGAGTTACAAGCGACGAACTCATCTTCTTCGTCACTTCAAGAACGAGTGCGGAGGAGATTCAAAGTGGAAATTTGACGATGTGAGCCCTGTCATCTCGAAACGTCACGATTGCTCGAAATGTCGAAAGAGTTACAGCTATCGAAGTAATTTGGTGCGTCACATCAAGTTCGAGTGCGGATTACCACGAGATTTGTCCGAGAATTGGGACTTTTTTGCTGTTCATCACCAGAACTCAATGTTGGAGCACGAGGTGATGAGTCGCCATCACTGTCTCCAATGTGGGAGGAGTTACAAGCGAAGAGATCACTTGAAACGTCACGCCAGGTACGAGTGTGGGAAACCGAACAGATTTCGTTGTCCCCATTGTCATCAGGACTATCGTCAACGGGCCCAAGTCTGGCAGCACATCAGACACCTTCACGGGGACTCAGAGCTTTGTTGCATTGACAACGAGActaatcaaatattttattacctGAGGGCTCACAAAAGCGAATCCTGGGAGAACTGGGAGTTTGTCCCTGTCGTTTGTCCACCTGTTAAcagtgaatcaaaaaatcgtTATCACTGTCTTCAATGCGGACGGAGCTACAAACGTCGTGATAACTTGAATCGTCATGCCAAGTACGAGTGCGGAATGCCGAATAGATTTCGCTGTCCCCATTGCCATCAGGACTATCGTCAACGGGCCCAGGTCTGGGCCCACATTAGAaatcttcataaaaattcgGATCTCTTTTGCGTCGACAATGAAACCGGGGAAATGCAATATTACACCGGAGgTGTATTCCTGGATGAGAAGAATCTACTGTACGCTGACAACGATAGAATTGGTGCTTTCAAGTGCCCCAGCTGTGATAAAGTTTACAAATGGAGAAAGTCAATGCTCGCGCATTTCAGACATCAGTGCAAAAAACCACCGAGATTTGAGTGCACACATTGTGAagttaaaaattatcagaagGGACATATTATGAGGCATCTTATCGTACATCATCCAGCGTTACCACAGATATATTATGATGCAAAGACAAAGACAAGGGTCAATCTTCGACCCATTGATCTCTTCATGATGGATTCAATAATGAATATCACTGATCCCGAGATCATGGACACACAGTACCAGCAGATGGCTCCCCAAATGGGACCACGTCAGACCCTCTTCTACTGTCCCAAGTGCCTCCGCGGCTTCACCCTGAAGAGCAATCGTAATCGTCATTTCAAGTACGAATGTGGCCACGAGCCACGATTCAAGTGCCCTTACTGCGACTTGCGCAGCAAACAAACTTCACAAATTTATTCTCACGTCAGGAGAAAACATCCTGATTATTATCAACCCGGTCACGTGGAACAATTGGATCAAGCTCTCTGTCTCGATCCTGTATTCAACGAACCCCAGAAACGCATGTTGGGTCGTCGCAGTCTCATTCATCAGAAACGTTTCTTCTGTCCAAAATGTCTCATGGGATTTACGATGATGAAAAACCTCAAACGTCATTATTATTACGAGTGCGGATGTGACCCGCGTTACAAGTGCCCCTACTGCGACTCCAAGAGCAAACAGACCTCCCAGATCTACGCACACATCAGGAGGAAACATCCTAATGAGAGAGTCTACTTCATCGATCTCATACTTTAA
Protein Sequence: MLQGQRLRRKPLALIFVRRHFRLRNHQEHPEEEPFNGQGRLPEPPKKSKCEGTKRFRCPHCGIPEWEFIAVNYDISNRHHCPTCQRSYKRRTHLLRHLKNECGIAKAFQCPYCMQSFRQRTHIWTHIRQNHTDSVLYCAPRKWEFIDVDQGPGHAGDHPAVDRHHCPQCGRSYKRRTHLLRHFKNECGGDSKWKFDDVSPVISKRHDCSKCRKSYSYRSNLVRHIKFECGLPRDLSENWDFFAVHHQNSMLEHEVMSRHHCLQCGRSYKRRDHLKRHARYECGKPNRFRCPHCHQDYRQRAQVWQHIRHLHGDSELCCIDNETNQIFYYLRAHKSESWENWEFVPVVCPPVNSESKNRYHCLQCGRSYKRRDNLNRHAKYECGMPNRFRCPHCHQDYRQRAQVWAHIRNLHKNSDLFCVDNETGEMQYYTGGVFLDEKNLLYADNDRIGAFKCPSCDKVYKWRKSMLAHFRHQCKKPPRFECTHCEVKNYQKGHIMRHLIVHHPALPQIYYDAKTKTRVNLRPIDLFMMDSIMNITDPEIMDTQYQQMAPQMGPRQTLFYCPKCLRGFTLKSNRNRHFKYECGHEPRFKCPYCDLRSKQTSQIYSHVRRKHPDYYQPGHVEQLDQALCLDPVFNEPQKRMLGRRSLIHQKRFFCPKCLMGFTMMKNLKRHYYYECGCDPRYKCPYCDSKSKQTSQIYAHIRRKHPNERVYFIDLIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -