Basic Information

Gene Symbol
Zbtb41
Assembly
GCA_034640455.1
Location
CM067961.1:4132825-4139062[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 36 0.00031 0.025 15.1 0.7 2 23 283 304 282 304 0.97
2 36 0.17 13 6.5 3.2 2 23 311 332 309 332 0.94
3 36 1.2e-05 0.001 19.5 0.2 1 23 338 360 338 360 0.98
4 36 5.4e-05 0.0043 17.5 1.5 2 23 370 391 369 391 0.97
5 36 3.2 2.6e+02 2.4 0.4 2 23 398 418 397 418 0.86
6 36 0.049 4 8.1 1.4 3 17 426 440 425 441 0.91
7 36 3.3e-05 0.0027 18.1 4.1 1 23 513 535 513 535 0.99
8 36 7.7e-05 0.0062 17.0 0.4 3 23 543 564 542 564 0.96
9 36 2.9e-05 0.0023 18.3 0.7 1 23 570 592 570 592 0.97
10 36 0.074 5.9 7.6 0.4 1 23 596 618 596 618 0.97
11 36 0.00015 0.012 16.1 1.8 3 23 626 646 624 646 0.97
12 36 0.0033 0.26 11.9 0.1 1 23 652 674 652 674 0.97
13 36 0.098 7.9 7.2 1.8 1 23 681 703 681 703 0.97
14 36 5.4e-07 4.3e-05 23.8 0.8 1 23 709 731 709 731 0.99
15 36 1.3e-06 0.0001 22.6 0.8 1 23 737 759 737 759 0.98
16 36 0.00089 0.072 13.6 0.4 1 23 795 817 795 817 0.93
17 36 1.2e-05 0.00094 19.5 2.8 1 23 823 845 823 845 0.98
18 36 3e-07 2.4e-05 24.6 0.4 1 23 851 873 851 873 0.98
19 36 0.0017 0.14 12.7 4.3 2 23 880 902 877 902 0.88
20 36 0.00013 0.011 16.2 5.1 1 23 907 929 907 929 0.97
21 36 4.9e-05 0.0039 17.6 1.2 1 23 938 960 938 960 0.98
22 36 9e-06 0.00073 19.9 0.9 1 23 966 988 966 988 0.97
23 36 3.7e-05 0.003 18.0 1.4 2 23 995 1016 994 1016 0.97
24 36 2.3e-05 0.0019 18.6 6.0 1 23 1022 1044 1022 1044 0.98
25 36 0.19 15 6.3 0.6 1 23 1096 1118 1096 1118 0.92
26 36 2.1e-06 0.00017 21.9 1.8 2 23 1125 1146 1125 1146 0.98
27 36 1.1e-05 0.00087 19.7 5.4 2 23 1166 1187 1165 1187 0.96
28 36 0.0024 0.19 12.3 4.5 2 23 1193 1214 1192 1214 0.97
29 36 0.0026 0.21 12.2 0.1 1 23 1219 1241 1219 1241 0.98
30 36 7.1e-06 0.00057 20.2 2.4 1 23 1249 1271 1249 1271 0.98
31 36 0.43 35 5.2 2.3 1 23 1277 1300 1277 1300 0.91
32 36 0.00044 0.035 14.6 0.3 3 23 1313 1333 1311 1333 0.96
33 36 1.2e-05 0.001 19.5 2.0 1 23 1339 1361 1339 1361 0.96
34 36 6.4e-08 5.2e-06 26.7 0.2 1 23 1367 1389 1367 1389 0.98
35 36 5e-07 4e-05 23.9 0.9 1 23 1395 1417 1395 1417 0.98
36 36 0.0011 0.09 13.3 1.7 1 21 1423 1443 1423 1444 0.96

Sequence Information

Coding Sequence
ATGTACTCCCGTCCCAAGGGCCTTTTCAATCTCCCACCTTCAGGAATTCTCAGACGAGCTACGAAACTTCATCAGATTTCTATatCCCGAATAAAAGACCAGAAAGTATCACACTCAGAAGACAGTAATCGTGAATTAAAAGTAATGAAAGTAGCTGCTGAGGTACCAAAATCCCAACTGCCGATTCCAAAGCTCCAGCCATTGACACAAAACCCCCAGTCACAGACTCAATATTTTCAGCTGTTGATTCTGAATCCCCACGTGCTCTTTCGGCAATCTCAGCAAAAGCTCAACCAGTCCCAACAACCGATTGAAGTACCTCAATCAGATATTAAAAATCCCCAAGGGATTCCAAAGCCCCAGCAAGCGATTTTAAGGGTCCAACCAAGGCTTCCAAAGCCCGAGCTACCAGTACGTCAACCAGATATTAAAAATCCTCAAGGGATTCCAAAGCCCCAGCAAGCGATTTTAAGGGTCCAACCAAGGCTTCCAAAGCCCGAGCTACCAGTACCTCAACCAGATATTAAAAATCCCCAAGGGATTCCAAAGCCCCAGCAAGCGATTTTAAGGGTCCAACCAAGGCTTCCAAAGCCCGAGCTACCAGTACCTCAACCAGATATTAAAAATCCTCAAGGGATTCCAAAGCCCCAGCAAGCGATTTTAAGGGTCCAACCAAGGCTTCCAAAGCCCGAGCTACCACTTCCAAAACTCGTAAAAATTCGCAAACCAAGACCTCACACCCCATCGCCCGATAATCGTGAAGATAACAGATGTACAATCTCCgataaaacattaaaaaaaagtgtGTGCCCTAAGCGTCACCTGGCAAGACACACATCATCATTGACATGCGACATATGTAAGAAAAAACTGCCCTCCAAATATTATCTAGAGCTACACGTGCGCAGGCATAACAAAGATTACACCTGTTTTTGCCCAATTTGCAATAAAGGTTTCTACATAAAGACCACCATGGAGTACCACAAGTCTAAGCACTCTGATGAGAAGCCATTTCAGTGTGAAATTTGTAAAAAGGCCTTTGGGAATAAAGTTTATCTCGGTAGGCACATGGCTATTCACAAACCACCTCATGTCGATGCGAAAATCACGTGTAGTATTTGCGATTACTCGACAAATCGCAGTCTATATTATAGAAGACATATGCGAACGCACACCGGAGAGAACAAGAAGCCGTGTAAATTTTGTGGCAAATTGATAACCAGGAGCTACATGCCGGTACACATTAGAACTCACACaggggagaaaaatgaaatgtgcGAATTTTGTGGGAAAACCTTTAACTCCAAAGCATGCCTACGAGAGGAGGACCTAATATACTCTCAACCCGAGTCATTAAACGTAGAATACCAGTTGTACACGATAGAAACAGACGCCGAAGACACTGAGCTTTacgaaattattcaaaataacgaggATATAGACTTGACCGAAGCCTGCGTCCTTGATCCAGGCTCCTCTGAGTCCCAAGCACCACCGAGGCCCCTGGAGCCTTCCCCGAGACCCCGAATAATAACGTACGAGTGCCCGAGCTGctccaaaaaatttcgaaaaaggCAGCAGTACTCTAGGCACATGAAAACTCATGACGCATCCTCGGGAGGTGCTTGCCCTCAATGCGGCCGTCACTTTCCGGATGACGAGAAGCTCCAGAAGCACATGATCAAGGCTCACCAGAACGACAGGCCCTTCCCCTGTCAGCTCTGTGGAAAAGCCTTCAAGACTGAAGAATTCCTGAAGGTCCACACGAAACAACACAACAAGAGATTCACCTGCGACATTTGCGGAATATCAAAGGTCTCAGGTTATGACCTGCGTCTGCACAAGAAGAGGCACAATCAGGAGTACACGACATTCTGTGGTATATGCCACAAAGGTTTCTACACGAATCAAACCCTGGAGAGGCACGTGTTAACTCACACTGGGGAAAAGCCATTTATCTGTAAAATTTGTAACAGTGCTTATGCCAGTGCAGCTTATCTCAGTACTCACGTTAAATCCCACTGGATTCAAAGGGAAAAGCACAAATGCAATGTTTGTGATTTCGAGAGCCATTGGAAGGCTGCACTCAAGGTCCACATGAGGATACACACCGGGGACAATCAGTACACCTGTGACACCTGTGGAAAGTCAGTCTCCAGTAAAACTTATCTCAGAATTCATATGAGAATTCATACAGGAGAAAAACCTCATGTTTGTGAGATTTGTGGAAGAGCTTTCAGTGTTAAGAAGTACTTGATGGTTCACCTGAGGACACACACTGGTGAGAAACCGTACGAGTGTCGTGTATGTCAGAAGAGacaaGTCTCCCCCCAGTTGCTCTCTCCGCCAAAGACCACCACCCCACCCCCACCATCGAGCACATACATCTGCAGAATCTGCGACAAAAACTTCAAAACGAAAAACCTGTTAGATGGACATCAAGTTGCCCACAGCGATGCACGTCCCTATCACTGTGATATCTGCAACAAGTCCTTCAAACGTACAAACACCCTGGCTGTTCATCGCAGAATTCACACACGAGAGCGCAATTTCGTGTGTGATGTGTGTGGTCGTGCATTCACGCAAACATCACAACTTGCGACACATCAAAGACGTCACTTTGACAAGTACATGTGCCACTGTGAACAGTGTGGAAAGGGTTTTTTCACCAACGCTGAATTGCACGGACACATGAACATAAAGCATGGAGCAAAGGAGCACGTGTGTCACTCgtgtgaaaaatcatttccaaaTAATCACACACTAGCACGCCACCTCAAGATTCACGATCCCAACTTCAAGCCCATCAGGCATCAGTGTgaattttgtggaaaaatatttgcataTAAAAATTCACTAGTGGTTCACGTTAAATCACACACCGGGGAGAACAAATACGATTGCCATCTCTGCGGGAAGTCAGTGTCCTCGCGAGGatctctccaggatcatctgAGACTCCACGGGggtgaaaaatcactcgtctGCGATGTTTGTGGGAAAGCCTTTCATAAGAAGACAACCCTCATCGTTCACAAGAGAACACACACTGGGGAGAAACCCTACACCTGTGATAATTGTGGAAAGTGTTTTACCCAGCATTCGACCCTCGTCATTCACAAACGATATCACACTGGACAACGACCCTATCAATACCTGCAGGTGAACCTAGCTCCATCGTGTGATTCACCCGAGGGACGTCCCTCGACCCCTCCCAGCAATAATCATCCAGGAGACCCCATAAAGACTGAGGAGTTTCAATGCCAAGAGGACATGCCTCTGGCGTATCACTGTCAGCCATGTggtgttttttttccctcccaaaATCTCCTGGAGACCCACAATCTGGAGCACAAGCCCAAACGTAAAAATACATGCGACACCTGCGGACGAGTATTTCGCACTGCCATGACTCTTCGAAAGCACATGAAGAAGCACACGATGAAGAAATCAAAGTCACAGACCCCGAGAAAGGAGAAAAGCGATGTTGAATTGGAGTGTGACACATGCAAAAAGACATTTCGCCACAAGAGCAACTTCCAGAAGCACCTTTTGAGGCACACAACTGGAGATTTGTCTTGCAAACACTGTGACAAAAAGTTCAGACTCTACAGGGACGTCACGAGACACGAGAAGACTCATTTTTTCCCCAGTTACATGTGCAAAGAGTGTGATTATGAGACAACAGTACTGGCTGCATTGAGCATCCACATGTCTCGACATACAGACAAGGCTGATCTTCCGTTCAAGTGTCATGAGTGTGACAAAAGATTCCGTAAAGCCATTGACCTGCAGGAGCACTATAACATTCATTCGGGTGACAAACCGTTCCTTTGTCAGGTCTGTGGAAGTGCCTTCTACCTCAAGCGACAGCTCTCCGCCCACTGCAGGAGAAATCATCCTGAGATAAAGGCGAATAAAGTCACCAGCACTGCCTGTGATATATGTGGAAGAGTCCTAGCAACGAAGAGATCCCTCTTCAGGCACAAGGAGAGCCACAACCCGACGAAGCTGTATCTCTGTGACTTCTGTGGGAAGAGCCTCAGCTCAGCTGAACACCTGAAGAAACACAGGAGAATTCACACTGGAGAGAAACCCTATGTGTGTGATATTTGTGGAAAGGGTTTCACTGATTCGGAGAATCTCAGGATGCACAGAAGGGTGCACACAGGGGAGAAACCCTACAAGTGTGATCAATGCCCCAAGGCCTTCTCCCAGAGGAGCACTCTGACGATACACAGGAGGGGACACACTGGGGAACGTCCATATGTCTGTCAAATCTGCCACAGGGGATTCTCTTGTCAGGGAAATCTCACTGCTCATCAGAAGAGTACTTGCGTTTAA
Protein Sequence
MYSRPKGLFNLPPSGILRRATKLHQISISRIKDQKVSHSEDSNRELKVMKVAAEVPKSQLPIPKLQPLTQNPQSQTQYFQLLILNPHVLFRQSQQKLNQSQQPIEVPQSDIKNPQGIPKPQQAILRVQPRLPKPELPVRQPDIKNPQGIPKPQQAILRVQPRLPKPELPVPQPDIKNPQGIPKPQQAILRVQPRLPKPELPVPQPDIKNPQGIPKPQQAILRVQPRLPKPELPLPKLVKIRKPRPHTPSPDNREDNRCTISDKTLKKSVCPKRHLARHTSSLTCDICKKKLPSKYYLELHVRRHNKDYTCFCPICNKGFYIKTTMEYHKSKHSDEKPFQCEICKKAFGNKVYLGRHMAIHKPPHVDAKITCSICDYSTNRSLYYRRHMRTHTGENKKPCKFCGKLITRSYMPVHIRTHTGEKNEMCEFCGKTFNSKACLREEDLIYSQPESLNVEYQLYTIETDAEDTELYEIIQNNEDIDLTEACVLDPGSSESQAPPRPLEPSPRPRIITYECPSCSKKFRKRQQYSRHMKTHDASSGGACPQCGRHFPDDEKLQKHMIKAHQNDRPFPCQLCGKAFKTEEFLKVHTKQHNKRFTCDICGISKVSGYDLRLHKKRHNQEYTTFCGICHKGFYTNQTLERHVLTHTGEKPFICKICNSAYASAAYLSTHVKSHWIQREKHKCNVCDFESHWKAALKVHMRIHTGDNQYTCDTCGKSVSSKTYLRIHMRIHTGEKPHVCEICGRAFSVKKYLMVHLRTHTGEKPYECRVCQKRQVSPQLLSPPKTTTPPPPSSTYICRICDKNFKTKNLLDGHQVAHSDARPYHCDICNKSFKRTNTLAVHRRIHTRERNFVCDVCGRAFTQTSQLATHQRRHFDKYMCHCEQCGKGFFTNAELHGHMNIKHGAKEHVCHSCEKSFPNNHTLARHLKIHDPNFKPIRHQCEFCGKIFAYKNSLVVHVKSHTGENKYDCHLCGKSVSSRGSLQDHLRLHGGEKSLVCDVCGKAFHKKTTLIVHKRTHTGEKPYTCDNCGKCFTQHSTLVIHKRYHTGQRPYQYLQVNLAPSCDSPEGRPSTPPSNNHPGDPIKTEEFQCQEDMPLAYHCQPCGVFFPSQNLLETHNLEHKPKRKNTCDTCGRVFRTAMTLRKHMKKHTMKKSKSQTPRKEKSDVELECDTCKKTFRHKSNFQKHLLRHTTGDLSCKHCDKKFRLYRDVTRHEKTHFFPSYMCKECDYETTVLAALSIHMSRHTDKADLPFKCHECDKRFRKAIDLQEHYNIHSGDKPFLCQVCGSAFYLKRQLSAHCRRNHPEIKANKVTSTACDICGRVLATKRSLFRHKESHNPTKLYLCDFCGKSLSSAEHLKKHRRIHTGEKPYVCDICGKGFTDSENLRMHRRVHTGEKPYKCDQCPKAFSQRSTLTIHRRGHTGERPYVCQICHRGFSCQGNLTAHQKSTCV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-