Basic Information

Gene Symbol
CSRNP3_1
Assembly
GCA_034640455.1
Location
CM067951.1:9274275-9279175[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.52 9.5e+03 -3.7 0.3 69 100 173 204 155 219 0.62
2 4 0.2 3.7e+03 -2.4 0.4 52 106 305 361 295 375 0.56
3 4 3.6e-100 6.6e-96 320.5 7.1 2 218 523 732 522 732 0.92
4 4 0.089 1.6e+03 -1.2 0.3 54 70 886 902 844 934 0.51

Sequence Information

Coding Sequence
ATGGAATCGGCTTTGGCCCAGGATATTTCTCCCCTCGTTGAGGCCCAAGAGGATTCCAGCTCAGTGGATCAACCAACATGTAACAATGAAGCGTTTATTGAAGTCCCCGAGACATCCACCACCCACTTCAAAGCAAACAATCATGAGGATGATTTAGATCAGAAATGTACATCACAGCAATCGTCTCACAATGGTGCAATGGTCCCAACAACTGACGATTACGAAATCTGCAGCATTTCCCAAAATAAAAACTCTATTACTACTGAAGTTATGGTGACCCAAGTGAATTCCCTCGGTGATAGACTATATTCCTACAGTGCCCCATTACCGAAGGAAAGGCCATGTGATTTTTCACCAATCAAtgcagagatgaaaaaaattggtgttGAGATATCGGAGGAAGAGGCCAAACAATTGAAGAACGATATCAGACGATTATCACCAGTGCTTGTGAGTACACATGAACGAACTCTCGGTGAGATATCATTGACATCAGATTCTGGACtatttgatgatgaaaaatatgaacaaaATGATCAGGAAACGTCACCGAGTAATTACGTAGATAATGTTGAGAGTGCTGTGAGTGACAATGATGATAAAACAGATGAGACTAAAACAGGTGTGGAACTGGGGATGGGAGAGAGTAGAGTCAGTGATAAGGAGAGAATGAGTACGTCAAAGGGGTTGATGGTCGTGTTGGAGCGAATTGATGAGAATCCAGAGGTTTTGCAGCTGAAGTTAAAGGAGGGCAATGAGTTGGGGGTGGAAAACACGTGTGTGAGTGATTTAAGGACCGTGAAGGATGTAGAGGGATATAGTTTGTCGCCCAAGTACTTGGAGAACGATCAGTTGACGAGGAAGAGTCCAATGGTGATGATCGAAAGGGTCAGTGGGCTGGGGGATCAACTGGTTGAGCAGGAGGACGTGAGAATTGTGAGGAAACTTGAGGTTGATTTTGAGGAGGAAGACGATGTGCTGGAGGCTAGCAAGATTAGTGAGTCCTCGGACTGTTTGGAGGATGTTAGCGCGGGGATTGGGGAGGTTCAGGAACAGCAAGACACTGAGACTGAGACTGAAACCGGCTCTGATAGCTCGGAACTCATTGGAATGCCTATTAATGAGACTGCCAGGTGTGGGGGAGATGCTATTGTTTGTGATGAGGTAAATCCAGAGGTGATGGCGAGGCTTGGAGCTGGGGAACCCGAGGCTTTTACTGAGGACTCGGCTGAGAGCCTCGCACTGGCTACGGGGACCAGGGATGAAGTCCGGTCGGATGGAAGTGATTCGGGGCTTGGTGGAGAAATTCCAGGGGATCCGGGACCTACTCCGGCTCCTGAGAGTGATTCAGAGACGAGCTTTCTGGATAGAATACCTGATGATATCCTCTCCGATAAGGAGAAAGTGGTGAATACACTGGAGGACTATGGGTCACCTAGCGGCAGTGCCAATGCAGTGACACTGCCTAGTTTTCCAACGCCACAAAAGAGTAGCCTGAAGCGACGATTGAGCGATTGCATGGAGGGTGAGCCGAATGCCAAACGTAACAACAGTGAGCCAGCCAGGAAAAAACGTAATATACAGTTTGACGCTGTTACGGTTTATTATTTTCCCCGGTCTCAAGGATTCACCTGTGTGCCCTCTCAGGGTGGGAGTACGCTGGGCATGAGTGCAACGCACACCCACGCAGAAAGATTTTCCCTGTCTGAGCATGCAGCGGAACAACGACGACTCCATCGTGCGCGTTTGGCGCAGGTACGCTCGGAAAGAGCAGCGAATTGTGTGGTAGAGGCTGCCTCGAGCTCTGAGGATCCCAGCGACGACACCGATGAGGAGCCCAGCGACGGCGAGGAGCTCGATATCGATAGCTACTATTTTCTACAGCCTGTACCTACGTGGCAGAGGCGCGCTCTGCTACGCGCCGCCGGGGTCAGAAGGATAGATGCACTTGAGAAAGACGAGTGCAGGGATATACGTGCTAGTAGAGAGCACTGCGGATGTGGTTGTAAAGGCTATTGCGATCCTGAGAGTTGTCCTTGTTCCAGGGCTAATGTTAAGTGCCAAgtGGATCGTGCAGGTTTCCCGTGCGGCTGCTCCCGCGACGGCTGTGCAAACTCCTCCGGGCGGATAGAATTCAATCCAGTTCGAGTTCGTACACATTTCATCCACACCCTAATGCGCCTGGagctcgagaaaaaatcgcgCGACGAGGACTCAACTGAGCACGAGCCTTCCCTCCCCCGAGGTCCCCTCCGCGATCATCATCCAGCCCAAATTCACGAACCCCAACCCCCAGACACTTGCCTGACCAACGGTTTCACAACCCTCCACTACGATCCCCACGATCCCACCGTCTGCCAGCCTCTCCATCCAGCCCGGGAAGATAGCCTGGACCTTTATGCTATTCGTGATGACTGTTATCCCTCCGAAGAAACCGTCGACAATTCGCACAATTCACCCCGCAAGCTCCATCCCGAATTCAGTCAAGCTTTTCAACCCTTTCCAACACAGCCTTTTCCACCACCGACCTACCCCGACTATCAATCCTACGAGAATCTTCCCTCGACATCTAGAACTCAATTTCCACCGCAATTTCAATCAGTACCTTCAAATCAAAACTTCTCCCACTATTCTCCTTACCAAGATCCAGCGATGCAGCAGTCCTGCCATCAGCAGCATCAACACcagcagcagcaacagcagccCATCTATGAGACGTCGTTCACCGACGATAATGGCGTCCAGCAGTACACTAATCTCAACTCAGTACAACCCATGAGTAGTGTTGTACAGCAAATGGGCAAACTCGAGCCATTCTCTGAATTATTAGCGGGTCGTTACTCATATTACGGCGATGTTGAGCCACAGCCAATCAGCAGTTATCATGCAACCAAAATTGAGGAGAAGGTTGTGGTACAGGAGGGCGAGGAGGGGGGCGATGATTGTGATGAGAACTTTGGGGAAATCATCAAGAAGAGCATGGTTGAAACTGTGTCTGCTTGA
Protein Sequence
MESALAQDISPLVEAQEDSSSVDQPTCNNEAFIEVPETSTTHFKANNHEDDLDQKCTSQQSSHNGAMVPTTDDYEICSISQNKNSITTEVMVTQVNSLGDRLYSYSAPLPKERPCDFSPINAEMKKIGVEISEEEAKQLKNDIRRLSPVLVSTHERTLGEISLTSDSGLFDDEKYEQNDQETSPSNYVDNVESAVSDNDDKTDETKTGVELGMGESRVSDKERMSTSKGLMVVLERIDENPEVLQLKLKEGNELGVENTCVSDLRTVKDVEGYSLSPKYLENDQLTRKSPMVMIERVSGLGDQLVEQEDVRIVRKLEVDFEEEDDVLEASKISESSDCLEDVSAGIGEVQEQQDTETETETGSDSSELIGMPINETARCGGDAIVCDEVNPEVMARLGAGEPEAFTEDSAESLALATGTRDEVRSDGSDSGLGGEIPGDPGPTPAPESDSETSFLDRIPDDILSDKEKVVNTLEDYGSPSGSANAVTLPSFPTPQKSSLKRRLSDCMEGEPNAKRNNSEPARKKRNIQFDAVTVYYFPRSQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRLHRARLAQVRSERAANCVVEAASSSEDPSDDTDEEPSDGEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDALEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCSRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKSRDEDSTEHEPSLPRGPLRDHHPAQIHEPQPPDTCLTNGFTTLHYDPHDPTVCQPLHPAREDSLDLYAIRDDCYPSEETVDNSHNSPRKLHPEFSQAFQPFPTQPFPPPTYPDYQSYENLPSTSRTQFPPQFQSVPSNQNFSHYSPYQDPAMQQSCHQQHQHQQQQQQPIYETSFTDDNGVQQYTNLNSVQPMSSVVQQMGKLEPFSELLAGRYSYYGDVEPQPISSYHATKIEEKVVVQEGEEGGDDCDENFGEIIKKSMVETVSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00438072;
90% Identity
iTF_00438072;
80% Identity
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