Basic Information

Gene Symbol
NCOR1
Assembly
GCA_034640455.1
Location
CM067946.1:91565-106808[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.2e-09 6.7e-06 26.2 0.0 3 43 556 596 555 599 0.96

Sequence Information

Coding Sequence
ATGAATTACGGAATTCACAAATTGTCATATCCAAATCAGAACTACATAAACATCAAGAGCAACAGTCCAGTACCACCGCGCACTGTAGCTGTCAGTAGTTATGGACAGGGTGGAACAGGTACACCGTCGGTTGCTGGTGTAGGTCCACCAGGTAACAGTGGCACTGGATCAACTGTTGGGGTTACAGGCTCTGGCGGTGGTAATTACGTAACCGTACCAGTACCAAGTGGTCTTAGATATGTGCATTCTTATCAACCACCACCGGTACCATCCGCCCCCGTCAATCAAACACCACCACCACCCGGTGCAGCCGCCGCTTACACCAGGGATCCATACAGAAATGCAACATCTAATGTGTCGGAGAGGGTGGCAATAAGTGTCAGCAGTAGTCCAGTAAGCCAAGTGGGTGTGGGTGTTGGTGTTGGCGCTAATGAATATCCTCCGAATAGCCGGGGTGACCGTCCACGAATATCCCTGTTACCACCAGCATCAGTAGCACCATCACAATCACCAACAAATGCTGATTATCATGTTACGAGTAATAGGAACCAACGGGTATTAATGCCAATACTCGGTGCTGACCAGTATGGCAGACAAGTGGAAATGGCAACGTTACAGGAGGCACCGCCCTTCAAGAAGATACGTCTTGGTCAGCCCCAGCAACAACCATCGTGTCAGACTATTTCACCGGCCGATGTGTGCATTAAACAGGATCATGCACAGCTGCCTCAACCACTCAGGATAGACACACGGccGACAGCAGGTGCCTACACACCACAGACAGAGGCCATATCACCTACCCTACCCGAGCCAACAATTCAAGAAGATGCAGCATTTCGTGTTACCAAGGATGAATTGCTTCAGCAAATTGGCAAAGTTGATCGTGAAATTGCTAAACGAGAGGGTGAAATAACGACGCGTAGGAAAAAGCTCAAGACATTGGAGGAGACAGCAAATAAACCCCTCGAGCCGAGTGGATTAAAACGACCGGTTGAGGAGCAATCACAACCGAAGCATCAGTCACCGGCCCAGAAAATTTATGCTGAAAATAGAAAAAAAGCGGAAGAGGCGCATCGGCTATTAGATAGGCTAGGGCAGAAGGTAGAGCTGCCATTGTACAATCAGCCGTCAGACACCAATGTCTATCAAGAGAACAAAACGAGGCATCAGACGTGCATGAGAACACGACTTATTGCTAGATTACGTAGGGAGCACTCAGAACGTGCCTCACTCCATCGACAACAGGCCCAGACTTATGCGATACTTGTTCAAGAGTGGCATCGCAAGGTTGAGCGACTAGAGTCAGCGCAGAAGAGAAAATCTAAGGAgacgaaaaatcgagaattTTTCGAGAAGGTATTCCCGGAGTTGCGGAAACAACGGGAGGACAAGGAGCGTTTCAACAGGGTTGGTGCTCGTATAAAGAGCGAGGCTGATCTTGAGGAGATTATGGATGGGCTTCAGGAACAAGAGGAAGAGGTATCGGCAGAGTTAAAAAAAGCTATTGCAATCCGTCAGATGGAGGATAAGAAGATGCGTTCGTATGCTGTTATTCCACCCTTGCTCCTCGATGCCAAACAAAGGAGAATTGCATTTCAAAATAGAAATGGTTTACTACAACCTGAGGAGCTGGAGGCACTTCACAGCGagagaaaattgataaatgtttGGAGTGCTGTTGAGCATGAATTgttcaaagaaaaatatctaCAGCATCCCAAGAATTTTGGAGCAATAGCTCAAAACTTAGAACACAAATCAGTTCCTGACTGCGTGCATCATTACTACCTCACTAAAAAAgctgaaaattataaacaattattgcGAAAGTCGCGACAGAGAACGCGCAGTTCTCGAAATAATCCTAACAATaagGTAAACAATAGTAATTCTAGCATTGGACCGATAGATATATTAACGACAGGTGTAACGACGAGACTGCAACGTGAGCAGCAACAGAAGACCCaagaaaatccccaaaataatTCAACGTCAACCACTACCTCGTCCACAACAACTACTACGAACACACccccaacaacaacaacaataacAACCAGTGCATCTAGTTCTTCACAATCAACTACATCGCTAACCACAAGTAGTAGTACAGCGAGTGATACAGGAATAGTGACAACTGCTGCCTCCGTCCAGAGTACGACAGCATCGACGACAACTGTCTTGACAACGTCAACGTCGAGCGCCAAAGAGGCGAGAGAAGCTAACAAGGAGaataaagagaataaaaatgacacCAAGGAGTCAGTGGTGAAGGACATCAAGGAGGAGCCCAGTGGAGATTCTACAACGAGGAAGGACACCAAGTCGGTGGAAAATTCGGGTGGTAATTCGTGCGCGAGTGTGGTGGGTGCAAATGAAACAGTGGTACAAACATTTGAAACGAAGGATAAGAAGAAGCAAGCTGCTGCAGCAACGGCCAATGTCGCGAGTAATCGAACGAAGGACAAGAAAAAGGAGAATCATGCAGCACCAATGGAAACCAGTGACGAGGAGGCCCAGACAGTCGATCCAATTGTATTCATCGGGACAAGTGGACAGATACCAATATTACTCGTGTCAGGTGATATAATGAATATCATTGAGTCTCCATGA
Protein Sequence
MNYGIHKLSYPNQNYINIKSNSPVPPRTVAVSSYGQGGTGTPSVAGVGPPGNSGTGSTVGVTGSGGGNYVTVPVPSGLRYVHSYQPPPVPSAPVNQTPPPPGAAAAYTRDPYRNATSNVSERVAISVSSSPVSQVGVGVGVGANEYPPNSRGDRPRISLLPPASVAPSQSPTNADYHVTSNRNQRVLMPILGADQYGRQVEMATLQEAPPFKKIRLGQPQQQPSCQTISPADVCIKQDHAQLPQPLRIDTRPTAGAYTPQTEAISPTLPEPTIQEDAAFRVTKDELLQQIGKVDREIAKREGEITTRRKKLKTLEETANKPLEPSGLKRPVEEQSQPKHQSPAQKIYAENRKKAEEAHRLLDRLGQKVELPLYNQPSDTNVYQENKTRHQTCMRTRLIARLRREHSERASLHRQQAQTYAILVQEWHRKVERLESAQKRKSKETKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEEEVSAELKKAIAIRQMEDKKMRSYAVIPPLLLDAKQRRIAFQNRNGLLQPEELEALHSERKLINVWSAVEHELFKEKYLQHPKNFGAIAQNLEHKSVPDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNSNSSIGPIDILTTGVTTRLQREQQQKTQENPQNNSTSTTTSSTTTTTNTPPTTTTITTSASSSSQSTTSLTTSSSTASDTGIVTTAASVQSTTASTTTVLTTSTSSAKEAREANKENKENKNDTKESVVKDIKEEPSGDSTTRKDTKSVENSGGNSCASVVGANETVVQTFETKDKKKQAAAATANVASNRTKDKKKENHAAPMETSDEEAQTVDPIVFIGTSGQIPILLVSGDIMNIIESP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00046911;
90% Identity
iTF_00350951;
80% Identity
-