Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_034640455.1
Location
CM067955.1:1108160-1113257[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 3.1 2.9e+03 -1.5 0.1 3 19 158 174 156 199 0.65
2 6 0.68 6.3e+02 0.6 0.0 22 46 239 265 229 265 0.76
3 6 6.2e-12 5.7e-09 36.0 0.0 3 45 273 317 271 318 0.95
4 6 2.2e-10 2.1e-07 31.0 0.0 2 44 328 374 327 376 0.96
5 6 1.6e-09 1.5e-06 28.3 0.0 1 38 382 420 382 427 0.89
6 6 2.7e-10 2.4e-07 30.8 0.0 3 34 437 469 436 476 0.91

Sequence Information

Coding Sequence
ATGAGCGACCTAGAGGAAGATACAGAGATTCTCGAAGAAATAAAGCTCCTGGAAGATGCTCTCGCCCAACAGCCATCAGTGGAGCCCATCGCCGAATCACAGGATCTTCCATCCGAGGCAGACGCTCAATCTTCCCTCCCGACAATCGCAGATACCCTCCCCACATCGACACCCGAAGAATTCCTAATAAATGAGGCTTTTAAATTGAACGAGTCACTCCTCTCCAAGTGCCATCTTCTCAAGGCTCAGATCCTAGCTCGTATCCAGAAGATCAGTGAGGAACGAGAAGAGATCTCTGCGAAGGTGAAACTCGCCTCCAAGGTAGCTAAGGCGACTCCTAGGCTGAGTTATAGAAAATTCGGTTGTCCCTACTTTAAGGATGGGCAGTTGTTTGGCGCCCCGTGGAACCAGGACGCCCATACCAAATTTAAAAAAGGAGAAATCATGGTCGTGTATCACAGGCCGCCTCGTCGTTGGACCGCCAAAGACAGGAATAATCTGTGGATGGCTGTTCGTCTCCAAGCAGCCACTGAGCACTTCGAGAAGGAGGCGAGGAAACAGTCCCAGAGGACTATTTCACAAATAAAAGCCAAGGCCAAACGAGGAGGCCCTAAATCACTAACGGCGAGTGAACCATTTGATCTAGACCTCGAAAAGTGTCAACTTCCCAGCAATTACCGAGAGATGATCGGCCCCTTAGGTTCCAGGGAATTCGATTGGATGAAGATCGCAGCAGGCGATTCTAACAATCGTCATTCAGCAGAGGAATGTCGGGTTATGTGGAACGTTTATCTTCATCCAGACGTGAATCGTTACAAATTTACAACCTCTGAAGATCGCGATTTGATAAAAGCTGTTCATGTACACAACCAGCAAGACTGGAACGCAATAGCTGAAACTGTGGGAACAGGAAGGTCTGGTTACCAATGCATCATTCGTTACTTGACCTTAGTTGGTCCACtgaacttgaaaaataaagatgTTCCATGGACAGCTGAAGAAGATCAGGTCCTTATTAATGTTGTGGAATCATTGAGAATTGGCAATTATATTCCCTGGAGTCAGGTGACGTTTTACATCGGTAATAGGATCAAGAATCAGGTATATTCTCACTGGAAATACAACATCGATCCTTCCTTAAGAAAAGGTAGATTCACATCTGACGAGGACGAGTTAATCCTCGAAGGGGTCACCAAATTTGGCAAAAACTTTTCCAGAATTGCAATCGAACTTCTGCCCCATCGTACAAGCGTTCAATTAAGTGGAAGGTTTACCCTTCTAATGTTGAAAACCGATCAGTCGTACAACTCTTGGACAGTCGCTGAAGACATGCGTCTGTTAAAACTATACGAGGAATTCGGTCCCCAGTGGAGCAAAATTGCTAGTCTCATGAAAAAGAACAGAACATACTTGAGACACCGATATGCCTGCATCACTCGACACTTCGCCAAAGGTCGTGATCTATCAAACATCCCAAGAAAGCGAAGACGAGGTCGACAGCCCGAGGACGATGAGAGAATCTTGAACGAAATGTTTGTTCTCGGCGAAGTGAACGAAACTTACCTGGACGTTGACACGAGGCTGAGAAagtatttccaaaaaaatcaagcGCCCATTGCAACACCCGGCAGGAATACTAAATACTTTACTGCTGAGGAGCTCGAGAGATACACAAAAGGGCTCTACGATTTATTTGAAAAGCTAGATGTCCAGCTGCAGATCCCCGAGAATCTTGATATTGAAGGATTAACCTGCAAGGACAAGCAGCTTCTCATATCGTTTCAGAATTATTCCTCTGGGAAAGAGCCGCGTGGAATAGACGACTTGGAGGTACTCAGGAAGAAGATGTTCGGGGAGGACGAGAATGAAGGAGAAAGCAAAAGCTTGTACATTCCCCCAGCTCCTTTTGGTCTTCACTTCAAGAAATGTCCAAAGAAATTTAGCAGAAAACAATACGAGAAGACGACAGATGATGACTGTGTAGTTACCTTGGATCACAATATCGAGACTCCAGAGAATATTAACAAAATGTTGAAGGACGAGGAGCTCGAGGTCTTCGACAAACTCTCGGAGATGTTGTCGAAGCCCTGTGCAAGAGTTGATGTCCTAGAACAGAAGCTTCTGAGGGTGGAGCCTGAAGTGGAGAGAGATTTAGTGGATAATAATGCGATCAGTTCGATATCCTGGGGTAGAAAGATGGGCGAAAGTATGAAAACGATGGAGGATGCTGAGAGGGAGCGGAAGAAATGTGTGGCCCCCATGTATGCGACGCTATTGGGGTATGACACCCTCAGGAACATGAAGGAGGCTAATGCGGACCTTGGCTGGACCGAGGATGAATCGAGGATGAGCAAGGAACCTGTTACGGCGCTGGGAAAGAGAGCTTTTCATACTTTTAAAAATAGATTCACAAGGCTTTTCAAATATCCTATTGGGATGGTAAAGTATAATGAGATGATCAAAGCTGGAAATTCGAAGTTGGGGGGGTCAACGAAGGATAAAGATTGA
Protein Sequence
MSDLEEDTEILEEIKLLEDALAQQPSVEPIAESQDLPSEADAQSSLPTIADTLPTSTPEEFLINEAFKLNESLLSKCHLLKAQILARIQKISEEREEISAKVKLASKVAKATPRLSYRKFGCPYFKDGQLFGAPWNQDAHTKFKKGEIMVVYHRPPRRWTAKDRNNLWMAVRLQAATEHFEKEARKQSQRTISQIKAKAKRGGPKSLTASEPFDLDLEKCQLPSNYREMIGPLGSREFDWMKIAAGDSNNRHSAEECRVMWNVYLHPDVNRYKFTTSEDRDLIKAVHVHNQQDWNAIAETVGTGRSGYQCIIRYLTLVGPLNLKNKDVPWTAEEDQVLINVVESLRIGNYIPWSQVTFYIGNRIKNQVYSHWKYNIDPSLRKGRFTSDEDELILEGVTKFGKNFSRIAIELLPHRTSVQLSGRFTLLMLKTDQSYNSWTVAEDMRLLKLYEEFGPQWSKIASLMKKNRTYLRHRYACITRHFAKGRDLSNIPRKRRRGRQPEDDERILNEMFVLGEVNETYLDVDTRLRKYFQKNQAPIATPGRNTKYFTAEELERYTKGLYDLFEKLDVQLQIPENLDIEGLTCKDKQLLISFQNYSSGKEPRGIDDLEVLRKKMFGEDENEGESKSLYIPPAPFGLHFKKCPKKFSRKQYEKTTDDDCVVTLDHNIETPENINKMLKDEELEVFDKLSEMLSKPCARVDVLEQKLLRVEPEVERDLVDNNAISSISWGRKMGESMKTMEDAERERKKCVAPMYATLLGYDTLRNMKEANADLGWTEDESRMSKEPVTALGKRAFHTFKNRFTRLFKYPIGMVKYNEMIKAGNSKLGGSTKDKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-