Basic Information

Gene Symbol
ct
Assembly
GCA_034640455.1
Location
CM067949.1:190573-202501[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.5e-27 5.4e-24 84.0 0.0 2 72 492 563 491 568 0.95
2 3 3.1e-32 1.1e-28 99.0 0.0 3 77 904 979 902 981 0.96
3 3 3.5e-30 1.3e-26 92.5 0.0 3 75 1141 1214 1139 1218 0.95

Sequence Information

Coding Sequence
ATGTATCGTGCCAATACCATCACCCAACACCAGCCATTTAATACTATCGCCTATATTCCACGCTCCCAGCCACCCCCCGGCTTCTCACTCCTTCTCAACAGGGCAAATGCATTGGTGTGTACCATCACCACTGACTCTATTAATCAACTGGTCGAGGAGGTATCGAGATTACAACAGAGTCTTCAGCGTCTTCAGGAGACCAGTGCACAGGCGACAGCGAGACTCGAGGAGGAGCTTGATAACAGAAGACAGCATATAGCGAGATTGGAGAGCAAGTTGGAAAGACAACGGGACTATAATGAGCTTAAGAGGGAAATAAGTGTACTGAGATCGGTGGATTTGTCCCAAATACCCACTGGAGAACCTGGAAAGAGTCTTGAGCATTTGTTAATGGAAAGAACGAAAGCTTTGCAACAAGCTGAGACATTGAAACCACCTAGCACACCTGATACACTTGGTGGACTAGCCTCACCACTGCAGCGCGCTGCAACCGCCTCGCCCCATGGCAGTGGCGGTGGTGTTGGCAGCGGGAGTACACCCGTTACCCTCGTGTCCACCCAACAGGTGCTCCCAACGCGCTCCACCCCAACACCCTCATCGGCCACATCAACGGCCGCCTCGGGTCTCCTATTCCCGCCTCCTCTTCAAAATGTCGAAACATTTGGCTCATTCCTTGGTGAAGAAATTGTCGCCAATTGGAGGCGATCCCTGGAGAGGTCAATAATGagccaacaacaacaacagcagcagcagcagcaacagcaacagcatcaacaacaacaacaacaacaacaacaacaacaacaatcaCAACAAACATCACAATCGTCAATCGCACAATCACAACAGACCCAATTATCCCAGCTGTCTCAACAGCACACCCAATCACCGGTACAAACTGGGCTGCAGCACTCGTCGCTGTACCCATCAACAACACCAAATCTAAATCACCTTCCATCACCAACAGATCCAGCATCATCGTCAAATAATGGTACGAGTGGACCAATGAAATCGAGTACACCACTTGGTAGCTTGGAAAACATCACGGAGAAAGCACCAACGCCGATACCTGGACATGAGACACCAGCACCACCACGACCCTCATCAACAGCTGCACTCACATCACCACCAGCTAGTCTTCAGCCACCGGCCAGTTTAATCGAGGCTGCCATGAATGGGGCAAGCATGCCTGGTCTTTTACCACCAAAAAGCCCACACGAAGAATCCTGtcacaataacaataatagcCATCATCTTGCCAATAATAACAACAATAGCATCGGTAGTTTGAGTGTATTAGACAGTCTCAAGAGTCCGTTTCGCTTCGACGAGAGAACCCATCCGTTTCGATTTGGAGATGACTTTGGAGCTGCCGGAATGGCTGGTAGACTCGGTGAATCACTCATACCTAAAGGCGATCCGATGGAGGCACGACTACAGGAGATGCTACGTTATAATATGGATAAATATGCATCTCAGAATCTTGATACACTTCACATAGCAAGACGTGTTAGAGAACTACTCTCTATACATAATATTGGACAGCGTCTATTTGCTAAATACGTTCTTGGACTGAGTCAGGGAACTGTTAGTGAACTATTGAGTAAACCAAAACCATGGGACAAACTAACTGAGAAGGGACGCGACAGCTACAGAAAGATGCATGGATGGGCCTGCGATGAGAATGCTGTTTTACTACTCAAATCTCTCATACCGAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGTATGCCAACATTTGGCCGTCCACAGGAGGGCGGACCCCCTGACATAAACGACGAGAGAATTGCCCACATGCTCTCGGAATCTGGACACCTGCAGATGAGTCGTGCTAGTGAACATGACACTTCCAACGATGCTGACAGTAAGAGTCCGAGTAGACTGGGATGCCCGAGCCCATTCGGCAAAGACAGGTACGACAGTCAGAACAGGAGGCTGAAGAAGTACGAGAATGATGACATTCCCCAGGAGAAGGTTGTGAGGATTTATCACGAGGAGCTTGCTAAATTAATGGGAAGAAGAGCCGATGACTTACGGGGACCAAGAGACTTTCCTCCAAGCGCGATGTTTCCTCACTTTTTCAGTGGTGGCCAGGGTATCCAGGGGATGGAGCGTACTCAGGAGGAAATCAGATTAGCTCTTGATGCGTACCACAGAGAgcttcaaaaattgaattcagcgTCAGGTGGAAATCCCGGGCTAGGAGGTCTCTCAAGCCTACCAAATCTGCCGGGTCTCCTAGCCCTTCACCAACAAGCCCTCCATCAAAATCACCTGGCAGCCAATGGCACTGGCGTCGGTGTACAGGACCTTAGTCTGGGAAAAGTTGATCCCCGCAGTAAAATGATGAACGGCGTTTCCGAGGaggataaagaaaaaatggaaGAGGCCATGAGACATGCTGGCAGTGCATTCTCCCTCGTAAGACCTAAACAAGAGCCAACGGGCGCACAATCAACCCCAGGTGGATCCAGTGCAAGTTCACCACTTGGTAATTCAATATTACCACCCGCCATGACACCCAACGAGGAATTTTCCGGTGCTGCTGCAGCAAGTCCACTCCAGAGAATGGCATCAATCACAAATAGTTTGATCAGCCAACCGTCCACACCAACTCATCATTCAGCAAATCAACGACCCCTCAAAGCCGTTCTACCACCGATAACGCAACAACAATTTGATCTTTATAATAATCTCAACACTGAAGATATTGTAAAGAGGgTAAAGGAGCAATTGTCACAGTATTCAATATCTCAAAGACTCTTTGGCGAGTCGGTTCTTGGGCTTTCTCAAGGCTCGGTGTCCGATCTACTTGCACGTCCCAAACCTTGGCACATGCTGACGCAAAAGGGACGTGAGCCATTCATAAGAATGAAAATGTTCCTCGAGGATGAACAGGCGGTTCACAAACTCGTGGCTAGCCAGTACAAAATTGCTCCCGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGcaTGCGGAACCCCCATGAAGCCAATGCCCCCAACAAAACTCGTCCAGGAGCAGCTTCAAAACGCGGCGAAAGCCCAAGCAGCAGCACAAGCAGCTGCTGTGGCGGCGGCGCAACATCAAGAGCACCAGATGCAATTGGGTCCACCGTCAGGTCCCCAGCACGGCAGTCATCCAGTACCACCACCACCAATGATGCTGACACCACCTGGCACCCACCACGGCGCAACTCATGCCGCTCAATTGTCCATCCAAGAGCTTCAGAAGAAGCAGcaccagcagcagcagcagcagcaacagcagcaacaACAAATGGGTCTTCACTCTCCGCACCAGATGACCCCCTCACCCCTGCGTAGTCTTCATCCCCATATCTCGCCGAGTGTCTATGAGATGGCAGCATTAACGCAGGATCTAGACACACAAACAATCACAACGAAGATCAAGGAAGCGTTACTAGCAAATAATATTGGACAGAAGATCTTCGGTGAAGCTGTGCTCGGACTATCGCAGGGTTCAGTGAGTGAGCTTCTCAGTAAACCAAAGCCCTGGCACATGCTCAGTATAAAAGGTAGAGAACCATTCATCAGGATGCAGTTGTGGCTGGCGGATGCCCACAATGTCGATAGACTCCAAGCGTTGAAAAATGAGAGGCGCGAGGCCAACAAGAGACGTCGCAGCAGTGGTCCGGGACATGACAACAGCTCAgacacatcgagcaatgatACAGCTGATTTTTACCATGCCTCAGGTTCCCCCGGACCAGGCCCTCCCTCCGCAAAAAAACAGAGGGTTCTTTTCTCTGAAGAGCAGAAAGAAGCACTGAGACTTGCATTTGCCCTAGATCCCTATCCCAACGTAGCCACCATTGAATTTCTCGCTGGCGAGCTTGCCCTATCCTCGAGGACAATAACAAATTGGTTCCACAATCATAGAATGAGGCTCAAACAGCAAACGCCACATGGTCAGCCGGAGCCACAATCACCGAGGGAGCCTGGACAGCCGTTTGATCCAGTACAATTTAGACTGCTCTTGAACCAAAGACTGCTTGAGATACAGAAGGAGAGATTGGGACTGGGGAATGTGCCAATTCCCTACTCGCCGTACTTCAATCCAAATCTTGCGACTCTCATGAGCAATGCTTTGAAGGAGCAGTGCTCAGGTCTGGACCTCTCGATGGGCTCGTTGAAGAGGGAGCCCAATCAGGAGTTTGAGGACGATGACGGGGAGGATGCTATGAGTAATCTTGGTAGCGAGGATTCAGATGGCTCAGCATCTAGTATAAAACGTGAGCCCAGCGATCACAGTCAAACACAACCAACCGCAGCTACCTCGGCAAGATCCAACAGGAGAAAGCCAGCAGCTCCTCAGTGGGTGAATCCAGAGTGGCAGGAGCCAGCCAGAACCGGTGATGAAGTTATTATCAATGGCGTTTGTGTTATGCAGACTGATGATTATGGAGTTAAAAGGGAAACCGAAGAGACGATAAGAGTTGAACCAACACCTGTACAGGACAGATACGATGATGATGCGCAGAGCGATGTGTCATCGGTCTCTGGTAATAATGGACAGGATCGCGACAGTCCGATACCGAGTCCAAAGTCAGGTCAAAATAGTCCAATTACCTCACCACGACCACCGTCACAACAAAATGCCCAGGATAATGGAGAGAGTCCGAAGGAAATTGTTAAGCACGAGCCGGAGGAAACGTGGGATTATTaa
Protein Sequence
MYRANTITQHQPFNTIAYIPRSQPPPGFSLLLNRANALVCTITTDSINQLVEEVSRLQQSLQRLQETSAQATARLEEELDNRRQHIARLESKLERQRDYNELKREISVLRSVDLSQIPTGEPGKSLEHLLMERTKALQQAETLKPPSTPDTLGGLASPLQRAATASPHGSGGGVGSGSTPVTLVSTQQVLPTRSTPTPSSATSTAASGLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQQQQQQQQQQQQHQQQQQQQQQQQQSQQTSQSSIAQSQQTQLSQLSQQHTQSPVQTGLQHSSLYPSTTPNLNHLPSPTDPASSSNNGTSGPMKSSTPLGSLENITEKAPTPIPGHETPAPPRPSSTAALTSPPASLQPPASLIEAAMNGASMPGLLPPKSPHEESCHNNNNSHHLANNNNNSIGSLSVLDSLKSPFRFDERTHPFRFGDDFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVLLLKSLIPKKEYVSGKEQGMPTFGRPQEGGPPDINDERIAHMLSESGHLQMSRASEHDTSNDADSKSPSRLGCPSPFGKDRYDSQNRRLKKYENDDIPQEKVVRIYHEELAKLMGRRADDLRGPRDFPPSAMFPHFFSGGQGIQGMERTQEEIRLALDAYHRELQKLNSASGGNPGLGGLSSLPNLPGLLALHQQALHQNHLAANGTGVGVQDLSLGKVDPRSKMMNGVSEEDKEKMEEAMRHAGSAFSLVRPKQEPTGAQSTPGGSSASSPLGNSILPPAMTPNEEFSGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDEQAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAVAAAQHQEHQMQLGPPSGPQHGSHPVPPPPMMLTPPGTHHGATHAAQLSIQELQKKQHQQQQQQQQQQQQMGLHSPHQMTPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLADAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTADFYHASGSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPIPYSPYFNPNLATLMSNALKEQCSGLDLSMGSLKREPNQEFEDDDGEDAMSNLGSEDSDGSASSIKREPSDHSQTQPTAATSARSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMQTDDYGVKRETEETIRVEPTPVQDRYDDDAQSDVSSVSGNNGQDRDSPIPSPKSGQNSPITSPRPPSQQNAQDNGESPKEIVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00046850;
90% Identity
iTF_00350897;
80% Identity
iTF_00438651;