Dall001292.1
Basic Information
- Insect
- Diachasma alloeum
- Gene Symbol
- -
- Assembly
- GCA_001412515.3
- Location
- NW:1322920-1331682[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0095 0.72 9.9 0.1 1 20 183 202 183 204 0.96 2 20 0.0038 0.29 11.1 1.8 2 23 213 235 212 235 0.96 3 20 0.0021 0.16 11.9 4.7 1 23 245 268 245 268 0.93 4 20 0.3 23 5.1 0.2 5 20 546 561 545 562 0.92 5 20 0.1 7.7 6.6 1.3 2 23 572 593 571 593 0.95 6 20 1.4 1e+02 3.1 5.4 3 20 622 639 620 641 0.92 7 20 0.069 5.2 7.1 0.9 2 22 749 769 749 769 0.94 8 20 0.0028 0.21 11.5 0.7 2 23 777 799 776 799 0.96 9 20 1.1e-05 0.00086 19.1 0.3 2 23 809 831 808 831 0.94 10 20 1.5 1.1e+02 3.0 0.3 2 19 852 869 851 871 0.90 11 20 0.0083 0.63 10.0 7.3 1 23 913 936 913 936 0.93 12 20 0.12 9.4 6.3 0.2 1 21 956 976 956 977 0.95 13 20 3.8 2.9e+02 1.7 3.5 1 22 984 1005 984 1007 0.79 14 20 0.0043 0.33 10.9 0.2 2 23 1017 1039 1017 1039 0.96 15 20 3.6e-05 0.0027 17.5 0.7 1 23 1106 1128 1106 1128 0.97 16 20 0.39 30 4.8 1.3 2 20 1243 1261 1242 1263 0.88 17 20 0.0036 0.27 11.2 2.2 1 23 1270 1292 1270 1293 0.96 18 20 0.23 17 5.5 2.3 1 20 1303 1322 1303 1326 0.84 19 20 1.6 1.2e+02 2.8 0.1 2 23 1431 1453 1430 1453 0.92 20 20 0.0021 0.16 11.9 0.8 1 23 1501 1524 1501 1524 0.97
Sequence Information
- Coding Sequence
- ATGGCTCGGGCAATGGTCTACAGGGGCTCCTCGAATCTCCTACATGTGGATCCACCGAATGATGAGGTGGACCCCCTGGAGCTCCCGATAAAAGCCGAGCCAAGCAGTCCGCTGATGGAGTCGGTCCCAGACTTCCCTGAGCCTCCCTACAACCCCCCAGACTCCACAAGCGCTACAGAATCGCCAGATCCGCCGGAGTCACGACCAGACCCCCTCGACTCACCAGCACCACCACAAGATCCGTTCGACTCACCAGCGCCACCACAGGACCCGCTCGACTCACCAGCGCCACCAGAGGATCCGCTCGCGTCACTAGCGCCACCACAGGACCCGCTTGACTCACCAGCGCCACCAGACTACGACTCCTCGGCAAGTTCTAGCTTAAATTCCTCTAAATCCCAAAAACCCCGGTCATCAGATCCTTTCAGAATTGCCAAAAATCCCAGGCGAAGTCGCCAACTAGCGCGATTTCTCCTAAACAACCGAAGTAAACTCCGAGAAAGTAGACTCCGCACTAGGTCCCTCGCGATATCCGCATCCTTGGCGTACGAATGTCCCGTTTGTTACGCGCAGTACAATGACCGCAGCGGTCTCTCAAAGCACCTGAGCTTCTTCCGCGGTGCCCAAAAGCGAATAGTCTGTCACGTTTGTAGGAAAGCCGTAGAAACCCCTCACCAATTGCTATCTCACAGAAAGTCCTCCCACCGTCACATCGCCTGGCCGGAGGCACCTTACAAATGCGACCACTGTCCCCTCTCGTACTCGAGCAAAATGTCCCTGCAAATGCACCTGTTCCACTACCACGACCTAGCAAATGACGATAAACCGGTGAAGCGTCGGGTTAGAAAGGTCGCAAGGCCATCAGTAGCTAGTAATATTCAAATCGCGTCAGCTAGGAGCGAGCGCAAGCAAAGGAGAGACCAATTGGCACTGGAGCGTAGTGAGAGCCTCCCGAAGCCCTCAACCGCGCGAAGGCGCTCGACAAATCGGCCAGGGCCGAAATCCTCGAAATCCCCCAGGTCAAATCCACCGCCCCAATCTAGCAGTTCTAGCGCCAATACCTCCAGTGCCAATGCTCCCTTCGTTCAGATCCATGCGGTACCTCAGGAGGTTGAGGCCCTCTTGAGTGATTACGAGGGCAGTCCCATGAAGAAGACAAAACTTGACGAGGCCCAAAAGTTGCCAGAAGTGGTGGAACTCACGTGTTTGAGGTCAGGTAGAGCTAGGGCAAGACCCGATGTAGTAGAGGAGAAACCTCAGGAATTGGATTCAAAGACTGAAGTAAAAGCTAAGACGCCGTTGAAGAGACCCTCGTTGCCTCAGCAAACTCCGAAGAGGAAGGGCACTCCGATGATACTAGCCACTCGAAAGGTGAAGCTCCTACAGACGCGTTATAACTGTCGAGAGTGTTATGTGTCTCTGACGAGAATTGAAACACTCGAGACTGAAGTAAATGAGTCCCCAGAACTGCTGTCTCAAATCGAGGGCACATCGATCGATCTTCAGCTTAAGAATCTGGAGATCGCTCTGAAGAAACTCGAGGTACCGCATTCCCCCTGCCCAGATGAGTCTCcagtgaaaattgagaaaacagGTGACTCGATGAAATCTAAGACCGAGATATACAGATCGAGCGTCTGTCGCACGAGATTCACAACGAAGCAGAAGCTAATCAATCATTATCTGTGCTTTCACACTAACTCGAGTCAGGACGAGTGTGGGGTATGCAGAATACGCTGTGGTAATTCTcgaaaattgaagaatcatTTGTTGCTTCATTGTGTCAAGATCATCCAGTCTAAGCAGGATCGATCGCCGATTGATCCCAAGGGGCCGTGCGAGAAGTATCGGAAGAAGCATTTGTGCCACGGCTGTAAGAAGCGATTCTGGCTGAGGTCTTGCTTGACCAAACATCAAGAGTTCTGTAGATTTACTCAATCAGAGATTAAGAAAATACctgagaaaaaggaaaatgctATTGTTTGTAACAATGCAATTGTTAGAAGAACCTCCCCGAGGAAACTTGAGCGCAAAACTAGTGATATACAATCTGCCAAGGGTGATTGTCAGGAGGAGAAGACTGTTCATCAGGACAAGACCGATCCAGTTGTCGCGGAAGTCAGTCGCGTTGAGTCACATAACGCCACATGGTCTTTACCTCCAATGAAGATTCACGAGCAACCCTCAGTGCCACCAGAGAATCACTGGTGGAACAAGAAAGTAACTTCAGCAGTCCTTGGAAACTCCTGTTCCACCTGTAACAACCACTTTCAGACGGCTGCCAATTTGGCAGAACACAAAAGGAAATTTACACCGAAACAGTTCAGTCGATGCGACATATGTGGAACACTGTTTCCATCTAGAAATCTCCTCTCCAGCCACAAGAAGATGACCCACTTTCCCGACGCAGGCACATCCAAAATTAGGTGTCCTGTTTGTGACCAGGGATTCGCTAAAAAAAGTAATCTGCGTGCTCACCTCCTGCACATCCATTACGATCAGATATCTAAAGGCATCGAGGAGTGGAGACAGCCTACTACCGTTTACGAAATGAAGTGTAAAGTCTGCAAACTCATATTTCAGAATCGAAGAAGATTCATCGAGCACAGTTTGTACTACTTGGACGATGAGATGTACAATTGCAACATCTGTGACAGTCGATTCGTTGGAAAATTTCGTTGTCATTTCCATTTGAAGACCGAGCACTACTCGAAGGAGATGCAGCAAGCTTACACTCATCATTGCCCGATCTGTAATGAGGGCTTCATGTATCAGTCACACCTACACGCTCACATGTTTCACGTTCACGATCTCGCTAATGATGCTGCAATCAATGGAGGTCATCTAGTGAACACCGATGATCCGTTTGTCTGTGCCACTTGTGAGCAAAGATTCGCGAGCATCAAACTGCTGGATCAGCACCAGAATTTCTACTCTAACGACGGAAAGTACCAGTGCGACAAGTGTGAGAGGAAGTGTAGATCTATATCGATACTCGAATGCCATCTCAGAGCATCGCACTCAAGTCGTACAGACGCTTTCCATGCCAAATGCCCAATTTGCGGGGAGGGAATATCATCGAAAACCTCTTGGATCTCTCACATCAAACATGCCCACGCGAATCCAACGAATCAGCCCTCGGAGTTCTGTCTGGAGAACGTTTGTACACTCAACGAATTGACCCGTGAGTCAGGAGAGAGTCACAGAATCGGAGGACATTCGAACCAGTCGACTGTGAGCCTTGAAGAGGATGTAGTCCTGTTGGACGAGGACGATGATCTGAGCATCCCGGAGGTCCAGACCGCCAACATTGAGTTCAATTGTGCCATTTGCGATGAAAAGTTCACCTCGAGCCAGGAGTTGAAGAGTCACAAGATCACTCATGGACCCGTTAACTACGTATATGAAGACAGCTTGAATTACTCCAACGTCCAGCTGAATCTTTCGTCAAAGGGGCATGAGTTTATCACAGAACCTCAACAATTACCAAAAATGCCGCTGAATGATTTCATCGGTCAATCCCTCGAGACGGCTCATCTCCCCTGCATCCCGTCCCAGGACTCAGGTGCTGTCCACAGTTATTCCACCGACAAGGATCCCTGCAACTTCTCAATCACCAATATTTACTCAGTCGGATTGGACGAGTACGAGAAATTGGCGAATAATCAGCCACAGGACGTAACCACGAAGAATAGCGAGGGGAATGAGACAGCGGAGATCCCACTGAAATGCGAGATCTGTCACCTTGTCTTCACTTGCGGCAAGACCCTCCAGAATCATCTGATAAGATACTCAAACTCTGGTGACTACGTCTGTGAGGTTTGCGGGAGAAGATTCAAGTGGTTAAGGGTCTTTCGGTCACACATCAGGAAGCATCATAAGAAGAAGAATGGCGTTGTTCCGTTGTACTACTGCGAACAGTGTGACGAAGCATTTGCCACGAGGAATTCCAAGCACATGCACTTTGCGCACATTCACAGTGATCTTCATATGAAGATATCCGATGACGATGATGTGACTATTGTTGAGAGTGAAGTTGTGGACAAAGCGGGAGGGAATTTGGAAAGTGTCGCACAGGAACAAGCGAACAAGCAGACAATTGAGGTGGACCTGActgaggacgaggaggaagATGTAGCTGATCCACGAGTGGTCAAGAATCCTGTGGAATCAGCACCGACACAAACGGTGACACCTCTCAGTGCAGCGGTAAAGCCGACTGTCGCCCAAGCCAGAGTTCAGCCGACAGCTCATCGTCCGACACAAGTCGCACCCAACATCTGTCCAATTGTCTGCAATATTTGTCACGTCGAGTCCATCGACGTCGAGTTTTTGGTGAAACATTTTGCAACAGCTCATGGCATTCGTCTGGCTCCTTACAAACCAAATACACAGTATGATCCTGAGGTTCAATCGAATTATCAAAATGTCGCTGGCATGAAAAATCACTCGACTTATCAAGTGAATAGCCGAATAGATTCTGAACCACCAGCATTGTTTTATTACTGCAAGAGTTGTAGAATTCAATTTGccaatgaatattcactgctcACTCATCTACGCAATGCACATGCTAAAAATGAAACGGTCGCGGGAAAACAGGATAATTGGAATTCATCGGATACAAATTCAAGTGGTGGAGGTGAGAGGGTTATGGTTGGGTCAAAAGTTCAGGGGCAATCAGCGGGGGTTGTCTCTATGGAAACTTCCTTCATCAATTCCGATAAATATATGTCAAATGCTGATTCATCAGCGCCTGAAAATGCCATGGATCTGACGAAAAAGAGAACTGATAATGTTGTATTATCGAAAATTGATTTGGAAGGGGGGCCTGACAGGCCTTATCGCATTCTCGGGGGTAAAAATTCGCAGAATATTCAATTCATTAGCGTTCAGAAGAAAGATCTTGTTAGTTTGACGCGACAGAGATTGCAGATGAGTAAAAGTCCGGAGGGAAACAATATTCCTTGA
- Protein Sequence
- MARAMVYRGSSNLLHVDPPNDEVDPLELPIKAEPSSPLMESVPDFPEPPYNPPDSTSATESPDPPESRPDPLDSPAPPQDPFDSPAPPQDPLDSPAPPEDPLASLAPPQDPLDSPAPPDYDSSASSSLNSSKSQKPRSSDPFRIAKNPRRSRQLARFLLNNRSKLRESRLRTRSLAISASLAYECPVCYAQYNDRSGLSKHLSFFRGAQKRIVCHVCRKAVETPHQLLSHRKSSHRHIAWPEAPYKCDHCPLSYSSKMSLQMHLFHYHDLANDDKPVKRRVRKVARPSVASNIQIASARSERKQRRDQLALERSESLPKPSTARRRSTNRPGPKSSKSPRSNPPPQSSSSSANTSSANAPFVQIHAVPQEVEALLSDYEGSPMKKTKLDEAQKLPEVVELTCLRSGRARARPDVVEEKPQELDSKTEVKAKTPLKRPSLPQQTPKRKGTPMILATRKVKLLQTRYNCRECYVSLTRIETLETEVNESPELLSQIEGTSIDLQLKNLEIALKKLEVPHSPCPDESPVKIEKTGDSMKSKTEIYRSSVCRTRFTTKQKLINHYLCFHTNSSQDECGVCRIRCGNSRKLKNHLLLHCVKIIQSKQDRSPIDPKGPCEKYRKKHLCHGCKKRFWLRSCLTKHQEFCRFTQSEIKKIPEKKENAIVCNNAIVRRTSPRKLERKTSDIQSAKGDCQEEKTVHQDKTDPVVAEVSRVESHNATWSLPPMKIHEQPSVPPENHWWNKKVTSAVLGNSCSTCNNHFQTAANLAEHKRKFTPKQFSRCDICGTLFPSRNLLSSHKKMTHFPDAGTSKIRCPVCDQGFAKKSNLRAHLLHIHYDQISKGIEEWRQPTTVYEMKCKVCKLIFQNRRRFIEHSLYYLDDEMYNCNICDSRFVGKFRCHFHLKTEHYSKEMQQAYTHHCPICNEGFMYQSHLHAHMFHVHDLANDAAINGGHLVNTDDPFVCATCEQRFASIKLLDQHQNFYSNDGKYQCDKCERKCRSISILECHLRASHSSRTDAFHAKCPICGEGISSKTSWISHIKHAHANPTNQPSEFCLENVCTLNELTRESGESHRIGGHSNQSTVSLEEDVVLLDEDDDLSIPEVQTANIEFNCAICDEKFTSSQELKSHKITHGPVNYVYEDSLNYSNVQLNLSSKGHEFITEPQQLPKMPLNDFIGQSLETAHLPCIPSQDSGAVHSYSTDKDPCNFSITNIYSVGLDEYEKLANNQPQDVTTKNSEGNETAEIPLKCEICHLVFTCGKTLQNHLIRYSNSGDYVCEVCGRRFKWLRVFRSHIRKHHKKKNGVVPLYYCEQCDEAFATRNSKHMHFAHIHSDLHMKISDDDDVTIVESEVVDKAGGNLESVAQEQANKQTIEVDLTEDEEEDVADPRVVKNPVESAPTQTVTPLSAAVKPTVAQARVQPTAHRPTQVAPNICPIVCNICHVESIDVEFLVKHFATAHGIRLAPYKPNTQYDPEVQSNYQNVAGMKNHSTYQVNSRIDSEPPALFYYCKSCRIQFANEYSLLTHLRNAHAKNETVAGKQDNWNSSDTNSSGGGERVMVGSKVQGQSAGVVSMETSFINSDKYMSNADSSAPENAMDLTKKRTDNVVLSKIDLEGGPDRPYRILGGKNSQNIQFISVQKKDLVSLTRQRLQMSKSPEGNNIP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -