Dall001706.1
Basic Information
- Insect
- Diachasma alloeum
- Gene Symbol
- -
- Assembly
- GCA_001412515.3
- Location
- NW:324133-330287[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.00019 0.015 15.2 0.4 1 23 735 757 735 757 0.97 2 17 0.032 2.4 8.2 0.7 1 19 763 781 763 784 0.92 3 17 0.46 35 4.6 0.8 2 23 790 811 789 811 0.95 4 17 3.1e-05 0.0023 17.7 1.2 3 23 820 841 819 841 0.98 5 17 0.0094 0.71 9.9 1.6 1 23 848 871 848 871 0.94 6 17 6.3e-05 0.0047 16.7 0.7 1 23 877 900 877 900 0.94 7 17 0.42 32 4.7 0.9 2 23 908 928 908 928 0.94 8 17 4.2e-07 3.2e-05 23.6 2.3 2 23 934 955 933 955 0.97 9 17 4.9e-06 0.00037 20.2 0.8 1 23 961 983 961 983 0.98 10 17 0.0029 0.22 11.5 2.8 2 23 995 1017 994 1017 0.95 11 17 1.2 94 3.2 0.9 1 23 1023 1046 1023 1046 0.81 12 17 0.019 1.4 8.9 2.9 2 23 1068 1090 1067 1090 0.95 13 17 0.00028 0.021 14.7 1.0 2 23 1097 1119 1096 1119 0.96 14 17 2.7e-05 0.002 17.9 1.7 2 23 1127 1148 1126 1148 0.97 15 17 0.0012 0.088 12.7 2.4 1 23 1154 1177 1154 1177 0.96 16 17 0.22 16 5.6 3.2 2 23 1184 1205 1183 1205 0.96 17 17 0.16 12 6.0 2.0 1 23 1211 1233 1211 1233 0.95
Sequence Information
- Coding Sequence
- ATGAGTGACCAAACTGGGACTACGATATTTATTGGTGacaagaataatgaaaattcgaGGGAGGAGACTGGGAAATGTGTGATTTATTCCTTCGATGATAATGTAGAAATTGGCGGGGCTAAGGGGGAAGCGAGGAGGAGTAAGGAGGACTGTGGAAATATTTTTGGAGATGCCATGCCAGCGGTGAAGTACACCTACAAGCGTTCAGCGCCAGTTTCCGCCTCATCTCCCCCAGCCAAAGTTGAACACAACTACAGCGACACGCAGCCCTCCACGGGTAAGCCCCCGCCGCAAGTGAAAACCCTGAACGACCTGAAGAGAGTCACCCCCAAGGTGAGGCTCTTCCCCCCAGAGGTAAAATCCCTGAACGAGCTCTCGAAGCCCTCGCAGGGCCCACCCGACACCAGAGAGCAGCTCAGGAACTACTGCCGCACCTGTGCAGGCTTGAAGATCCCCCTGGTCGACATCTTCGGGGAGAAGGGCCTCCAGATGCGCCTGAATCAGCAGATGAAGcacctggaggagatcaaccAGCACGACGGCCTCTCCACCCAGATGTGCATGGACTGCATCTGCGACCTGAAGATGAGCTACAAATTCTTCATGCAGATAAAGAAGGCGCAGATCAAGCTCAAGTCCCTGGTGAGCATCCCCGTGAGTGAAGAGAAGTCGAGGATCATAACAATTCCTGACAGTCCAAAGAAGAAGATTCCAGTTGAACCAATCAAAATTCAACTAATCAAGCCAGTTGAGGCAACTAAACCAGTCAGTGAACCTGTTCAATTACCCAGTGATCCACCTGTCGAGGTACCGAAGGATCCACCTGCTGAGGTACCTAAGGATCCCCCTGCTGAGGTACCTAAGGATCCCCCTGCTGAGGTACCTAAGGATCCCCCTGCTGAGGTACCTAAAGATCCCCCTGTTGAGGTACCCACTGATCCACCAACTCCTCCAGGCCCTGCCTCCCCTGCCCCAGCCTCTGACAACGAATCCCTCGAGGAATTCGACCCCGAGGACTCCTCCATGGACAACGACCTCCTGGAGCCGCCCGAGGAAGCCCCAGAGGAATCCGAAGCCCCAAGGAGCCCTGAACCACCTCGAAAGCCTCCAACACCAGGCCCCCTTAAACCCCAGTCAAAGTGCGAGACAGTATACCAATACGACACAGCTCTGAACACGTACATAAAAGTAGAGTCTCCCTCCCTGCCGCCAGCAGCTGACCTCGAGGAGCTAGAAgaccaaaagaaaaaatcgataaaGAGCGAGGAGAGGGACTCAGACCCCTCCAAGAAGGTTTTGAAGAGAAAAGCCAGTTCAGGGAGGGATTCACTGGACTCGCAAAGCAACTCGGAGTCGGATTCCCTGAAGAAAACCGTCAAGGATCCAAAGCTGCAGAAGTTGATGGGAAGCCCCCTGAACGTGTCCCCCTCGGGTGAAGACGGCGTAATGTACGTGACTGTGAAGGGACCAAAGCCCAACGAACTTCTTCTCGTTAAAGTCAAGAAGATGGAGAAGAATGGCGACAAAAAGGAAGAGAGCAAACCGATAATTCTGAAGAAGCCCCTGAAGCCAGTTGACAAGGTCCTGAAGACACCGCCTGTCCAATCCCCGGAGACAGTGGCCAAGTTGCAGAACTCTAGAATAATCGAACAGCAGATTGAGCAGTACAAGAAGAAGCGAGAGCAGATACTGGGGGGCACAGCGGGTATCCCGAATGCCCTCAAGTTCGAGGATGGAACTGTGAGGTTTGTAAATCCAGTGCAGAGTCTCGCTGAGACAGACGAGATGAGACGGGAGTCCAGTGACAGCGAGTCCAGGGAGAAGATCACGTTCAGGACGTACGGTATCACTGACACAGAGGAGAATCGTCCGTTGTCGACGAAGGAGTATCTGGCGAAATTTGCGAGGCTGAAGCGCAAGTGGGAGGAGGCGAAGGCGAAGAAGGCGGCCCTGCAGGAGCAGCTCAACGCCTCCTACACGGAGTGCAACCTGGAGAAGTTGACTAGGATTCTGGGGGAGAGGGAGAAGAACCTGCAGAATTTTCAGGAGTACCTGAGACAGAGGAAGATCGTAATAACGAGGCTCAAGGACGAGGACATAATATCGTTGTACGAGGGGAGGAGCACAGCTGATGCCAAGAAGAAGTTCCCCGATCTCATTGACGACCAGATGCCTGCTGATGGACTGATGGAGGTCGACTTGTTCGACTGCGACTACTGCATCCAGACGTTCTCCTCTCGTGACGCTCTCGAGGATCATCTCAAGACACACGACTACAAGATCAACTACTTCTGCGAGGACTGCGGCGAGGAGTTCTACAGTAATAAATCCAAAAGGTCTCACAATGTCACGTGCATTAAGAAGCTCATCTGCAAGTACTGCGACCTGATGCTGGAGTCGAGGGGTAAGAAGAGGCAGCACGAGCAGAAGCACTGCGACGCCATCTATGGACAGCTCTGCGACATCTGCGGGGAGAAGTTCAAGCACCAGGGGACCCTGGACCAGCACATCAAGACCCAGCACATGAGCTGGGAGAAGATCTTCCCGTGTCCAAAGTGCGAGAAGAAATTCGCCTTCAAACAGAAGTTGAGCTTTCACCTGAAGTCGGTGCACACGACGATGAGGGCGTACTTGTGTGAGGATTGTGGGGCGGACTTCAAGAATCCAGCGTCGTTGAGACACCACAGGATCAGGAAGCATCAGCCCAATGGCAACAAGAGGGAGTGCCCTGTGTGCCACAAGCTGGTGCCTTTCTACAGTCTGTCGAAGCACATGTACACGCACAAGGCTTATACCATTCAGTGTCCGCATTGCGATAAGATGTTTAAGAACACATCGACGCTGAAGCAGCACGTGAGGATCCACGAGGACCAGAGGCAGCACCGCTGCGACACCTGCGGGGTGGGCTTCAACAGGAGGGACGGCCTGCGGCTGCACATGAGGGTCCACCAGAAGACGGACAGCAGGGCGTTGAAGGAGTGCTCCTGCCAGATATGCTCGGAGAAGTTTCCCAATCACTCGATGCTGGTGATACACAGGAACAGGGTGCACAAGGATGGCAAGCAGTACACCTGCCAGATTTGCAACAGGTCGATGCTGTCGACGAGATCGCTGGACTGGCACATGTCGCATATTCACAATCAGACGACGCCGGGGATCTCCAAGGAGGAGGGGGACACGCCTGGTGAGAAGAAGCGAGTGACTTGCAATCACTGCTTGAAGACTTTTAAGACGGAGATGATACTGAGGACGCATATCAAGAATACGCATATGGAGAAGAACCCGGTCAAGTGTCTGGATTGCGAGGAGACTTTCACCTCGGAGGTCAGGCTCAGGCACCACATGATGGTGACGCACAACAGGCTGGAGGGCACCCTCACCTGTCCCCACTGTCCGAAGCGTTTTGTCAATCAACTGAGACTTAAGACGCATATGATATCGCACTCTGAGGACAGACCATTCACCTGTGAGATCTGTGGGTTCAATCTCAAGACCAAGATACAACTGATCAAGCATCATCAGAACAGACACAGCGATGAACGACCTCTGCAATGCAGGTACTGCCCTTGGAGGTGTAAACAGGTCTCCGCTCTCGTGTGCCATGAGAGGACTCACACCAATGAGCGACCCTACTCTTGCATTGTTTGTAAGCAACGGTTCAAGTATCTTGGGGATAAGAACAAGCATGAGAGGAGGCATGAGAGCTTGGGAGGGTCTGGCTTCAAGAGGATTGTCAGCGGGAGGAATGCGAAGAAGGGTGAGGGCGAGGGCGAGGGGGAGGCCGAGGGGGAGGGTGACACTTCGGAGGAGCAGGAGCAGGAGATTGAACTGGAGATGGATCAGGAAAACTATGAGATCGAGGGAGAACTTGGTGAGGAGGAGTTCGAGGAGGGCGAGGAGTTCGACACTGAAGAGCAGATTGTCAAATTTGAGGCTCAGGAGATTGAAGGGGAGTATGCACAGGAGTACGAGGAGACCTCCAGGGAGGCTTCGGAGGCTGCTGAGGTTATTATGAGCATGGAGGACGCCACTGTGTACACGGAAGAGGTGACGGCTGAGAATATTGAGGGGGCTGAGATGATTACAGATGAGATCATGACCAGTCAGATCCTGCAGACTGGGACGGTCGTGCATATCCAGCAGCAGGATGATGATGGCAAGATTCAGGTCATTCCTGTGATGCTTTCGTTGCCGGATCTGTCGGAGGGGGGGACTGAGGTCAATCTTGCTACTGCGTCTATCATGTATGATGATGGGTAG
- Protein Sequence
- MSDQTGTTIFIGDKNNENSREETGKCVIYSFDDNVEIGGAKGEARRSKEDCGNIFGDAMPAVKYTYKRSAPVSASSPPAKVEHNYSDTQPSTGKPPPQVKTLNDLKRVTPKVRLFPPEVKSLNELSKPSQGPPDTREQLRNYCRTCAGLKIPLVDIFGEKGLQMRLNQQMKHLEEINQHDGLSTQMCMDCICDLKMSYKFFMQIKKAQIKLKSLVSIPVSEEKSRIITIPDSPKKKIPVEPIKIQLIKPVEATKPVSEPVQLPSDPPVEVPKDPPAEVPKDPPAEVPKDPPAEVPKDPPAEVPKDPPVEVPTDPPTPPGPASPAPASDNESLEEFDPEDSSMDNDLLEPPEEAPEESEAPRSPEPPRKPPTPGPLKPQSKCETVYQYDTALNTYIKVESPSLPPAADLEELEDQKKKSIKSEERDSDPSKKVLKRKASSGRDSLDSQSNSESDSLKKTVKDPKLQKLMGSPLNVSPSGEDGVMYVTVKGPKPNELLLVKVKKMEKNGDKKEESKPIILKKPLKPVDKVLKTPPVQSPETVAKLQNSRIIEQQIEQYKKKREQILGGTAGIPNALKFEDGTVRFVNPVQSLAETDEMRRESSDSESREKITFRTYGITDTEENRPLSTKEYLAKFARLKRKWEEAKAKKAALQEQLNASYTECNLEKLTRILGEREKNLQNFQEYLRQRKIVITRLKDEDIISLYEGRSTADAKKKFPDLIDDQMPADGLMEVDLFDCDYCIQTFSSRDALEDHLKTHDYKINYFCEDCGEEFYSNKSKRSHNVTCIKKLICKYCDLMLESRGKKRQHEQKHCDAIYGQLCDICGEKFKHQGTLDQHIKTQHMSWEKIFPCPKCEKKFAFKQKLSFHLKSVHTTMRAYLCEDCGADFKNPASLRHHRIRKHQPNGNKRECPVCHKLVPFYSLSKHMYTHKAYTIQCPHCDKMFKNTSTLKQHVRIHEDQRQHRCDTCGVGFNRRDGLRLHMRVHQKTDSRALKECSCQICSEKFPNHSMLVIHRNRVHKDGKQYTCQICNRSMLSTRSLDWHMSHIHNQTTPGISKEEGDTPGEKKRVTCNHCLKTFKTEMILRTHIKNTHMEKNPVKCLDCEETFTSEVRLRHHMMVTHNRLEGTLTCPHCPKRFVNQLRLKTHMISHSEDRPFTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCIVCKQRFKYLGDKNKHERRHESLGGSGFKRIVSGRNAKKGEGEGEGEAEGEGDTSEEQEQEIELEMDQENYEIEGELGEEEFEEGEEFDTEEQIVKFEAQEIEGEYAQEYEETSREASEAAEVIMSMEDATVYTEEVTAENIEGAEMITDEIMTSQILQTGTVVHIQQQDDDGKIQVIPVMLSLPDLSEGGTEVNLATASIMYDDG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -