Dall002814.1
Basic Information
- Insect
- Diachasma alloeum
- Gene Symbol
- ZFX
- Assembly
- GCA_001412515.3
- Location
- NW:1265762-1273646[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.77 58 3.9 0.1 3 23 15 35 14 35 0.94 2 15 2.2 1.7e+02 2.4 2.0 1 23 772 795 772 795 0.80 3 15 0.004 0.3 11.0 0.3 2 23 879 901 878 901 0.95 4 15 0.00058 0.044 13.7 0.1 2 23 914 935 913 935 0.97 5 15 9.4e-06 0.00071 19.3 3.1 2 23 938 959 937 959 0.97 6 15 0.0011 0.08 12.9 0.3 1 23 965 987 965 987 0.97 7 15 1.5e-05 0.0011 18.7 4.5 2 23 994 1015 993 1016 0.95 8 15 0.068 5.1 7.2 3.7 5 23 1029 1047 1028 1047 0.97 9 15 1.4e-05 0.001 18.8 1.5 3 23 1054 1075 1053 1075 0.97 10 15 0.0077 0.58 10.2 0.5 2 23 1091 1111 1090 1111 0.97 11 15 4.1e-05 0.0031 17.3 0.7 1 20 1117 1136 1117 1139 0.92 12 15 3.6e-05 0.0027 17.5 2.6 1 23 1147 1169 1147 1169 0.99 13 15 0.0014 0.11 12.4 3.2 1 23 1175 1197 1175 1197 0.97 14 15 2.6e-06 0.0002 21.1 3.9 1 23 1203 1225 1203 1225 0.99 15 15 0.00019 0.014 15.2 7.2 1 23 1231 1253 1231 1254 0.96
Sequence Information
- Coding Sequence
- ATGGACTTAAACCTGGCATCGGACACCGGAGGTGCAGTGGCATGTCCGGTGTGCACGCTGTACCTCCGCGAGGGCATAAGCCTGCAGCGTCACCTGGACACGCACCCGAAGGAGCAGGTGATCGAGGCCCTGATAAAGGCCAGCAGCACCTCCGCGTCCCCCCTGCCGACGCTCCCCTCGCCGTCCCCCTCGCAACTACCTCAGTCCTCGTCCCAGACGTCCCCGTCGCAGCCCGGGGTCTCCCAGGGTCAGTCCCACCTGCCGCAGTCCTCGTACCCCATCGGCCCGGTCTTCGAGTACCCGCCCCTGAACGCCATGATGCCCCCGCAGTTCGCGTCCTTCAGTTACCAGCAGTTCGTCAACAACGGGACGATGATGATCCCCCAGTACTCGATACCCCCGCCGCCGCAGGCAAACCAGATGATGCAGATGCTGTACAATCCGTACAATATGTACCAGCAGCAACAGGTGCCGACGGTGCAGATGCTCTCCCCCGTCACCACAATCCCGACGACGCGGATACGCCCGGTGGTGACGGTGGCCGAGAGCATCTCCAGGAGCATAATGATACCGAGCAGTCAGGAGGGGAAGGCGATCATCCCGGAGATGATGGAGAGCGACGAGAGCATTCTCCCGGACATCGAGCCGCCGGAGACGGCCGAGCGGACGGGGGAGGACCGACAGACGGAGGACAGGGGGCAGCAGACGCTCCCCAGGCGGTCGCCGCACGAGCCCCCGGCGCAGAAGGACGACGAGGAGGACGAGGGGGAGAGCATCGTCCCCGAGATCGAGGAGCCCCGGGACGAGCACGTCCTCCAGCGGCCGGAGTACCCGAAGGAGAGGGAGGAGAGGGCCGAGAAGACGACGGAGGGCCGCGAGGAGCAGCCGAGCGAGAAGGAGGCGCCCTCGCCGGCTGAGGAGGCCGGCAAGAGCCTCAAGATCAACATGCGGGTGGAGATACCCCAGCAGGGGGAGGTGGAGCACCTCGAGCGCTTCCTCATGAACATCATGGAGGCGAATCCGGAGAGGAGCGAGCCCCCGAAGAAGCCGGAGGCGTCGCACGAGCCTCCGGCGGGCGCGGGCGAGGGTTCGCAGGCGGATTCCGGGGGGGCGCTCGCCCTGGAGATTGATTACAAGGCGCTGGAGGCGCCGTACAGGTACAGGAGCAGCCTGAGCGCCCCCGCCTCGCCGATGGGGGAGAAGAAGGCCCAGCAGAGCTTCTCCAGGTCGGAGTTCGGCTCCATTGAGAACCTCAATCTTTATCCCGTTGGGTTCGACGCCGCCGCTCTGCAGGAGCTGGAGGACGACAATCGAGAggaggaggacgaggaggaggagggggacGAGAAGAATGTTCCGGATAACTTCGAGGAGGAGGACATGGAGATCGAGGAGATCGCCAGCCCCCACACGCCCTTCGCCAAGGGGAGCGAGGAGAACAGGTCGCGCACACCCCTGTCGACCATCAGTGGGATATCCGGGCTCAAAGTGAGGACTGACCTGAGTAAGCCGGGGTCCCCTGCCTCGGTGCAGTCCTTCAGGGGACTCAATGGCGAGAGCGACGACGAGGGCGAGGACCATCAGAAGAACCCCCTCGACTGCTCCCAGGGGGAGGCCGAGGACGCCGGCAGGAGGTTCGACCCTGGGTGCCATCAGTCCGTCATCACTGAGCACGTCAGCTCATTCCCGGTGCTTTCCAATCAGCAAGGCAGCAGTGAGAGCTTCTCCCCCGCCAGCGGCAAGGGCCAGGGCCAGGATCTCACCGCCATCGAGGGCCTCGACCCCACCACCAGCGACTCCAAGAGCTTTCAGTCCATCGCCAAGACTATCAATCAAATACCAACGACGGAACTGCTGAATATCAATGAGGACGCGCATTCGGGCCCCATGAATGTGTTCGAGTTCGATGGACTGCAGATCCTTGTGCCCAGCACTTTTATCAGCGAGTCCAGTCAGAAGGCGATCAGCGCCACTAGTCAGCAGTCTATGGCCAGCAGCGAGGGCGGTGCGGGGATTGATGAGGAGGTGAAGAGTGTTAATATGAGGGCCGATGAGACTATGCCGCCCAGGGGGGAACTGTCCGAACAGGAGAGCAATGGCTGCACGGAGCATTCTGCTTGGCAGCTGTACGTAGGTCAAGAGTCCTCCCGGATGTCGACGTCGTACGACCTGATGGCTCGTGAATCGTGGGAGGAGTCCGAGGGCTCTGACAACGAGTCCGGAGTTCCCCTCCTGGACAGTCGTTCCCTGGCCACCCACTTTACCTCCTCCCTCTTCCTGGACCGCGACCGCAAGACCCCAACGAAGCGAACCTTCAAGTGCTCCCTCTGCACGGAAGTCTTCGATTGCCCGAAGGAGCGCCGAGTCCACAGTACAACAGTCCACAAGGAGGCAGGCCCCTCGAACAGCAGCAGCAACAGTGGCCCCCTGGAGACCCCAGAAGCTAAAGACATAAAGCTCCTGGAGGGTCGAATGAACGTCTTCGAGGAGATTTTCGTCCCAGGGATTCACGTGCCCACGTACCACCAGTCGCAGCCGCCTCTCCTGCACCAGCTGCAGCCCCCGCAGCAGCCCTCAGACCTCACGAAGCCAGACGGCGACGAGAAGGCCGAGACCCCCACTGGCCTCGAGATCTCCTGCGCCATGTGCTCCCAGAGATTCGCCTCAGAGCGTTCCCTCCAGGTGCACAATCGTCGAGTTCACGGTACAGAAGTGGCTAAACGCCTGCACGACATCTCCAAATGCCAAATCTGCAACGAGGAGTTCCCCTCAGTCGTCCAGTTCAATGCCCACCTGAAGATCCACCCCCTGGAGTGCTCGCAGTGTGGCAAGTACTTCTACAGAAAGCAAAACTTCAAACTCCACATGAAACGACACCTGGGGATCAAGCCCTTCCCCTGCACAGTGTGTGACAAGGCCTTCTTGACGAAGCAGAAACTCGACGAGCACATGAATGGCCACACTGGGAATGCCCCCGTCAAGTGCAATCTGTGCAACGAGACCTTCAGGAGGTACTCCAACCTCACTCAGCACAAGAATCGCCATCATCTCAACATTAAGAGAAAGCTCAAGGACTATATCTGCCACTGCGGTGAGGTGTTTCACACGAAGAAGAAGCTCGCCTGGCACAAGGAGACCCACGACGAGAAGCCCAAGGCCTGCACCTACTGCAACGAGAGGTTCATACACATGGCCAGCCTGACCAGACACATGAGGAGGGCCCACAACAGGCGATTCGTACCAGATGCTCAGAGGGAGAATGAGAATGTCGAGTGTCCCATATGTAAGTGCATTTATCTCAGATCGTCGTTGTCTGTTCACATGAGGGTTCACAATGGCGAGCGACCTTACGAGTGCCAAGTATGCTCCAAAGCATTTAGCACTAAGTGGAACTTACAGTTGCACAAGTGGACCCATGCTGCCAGAAGTACTAAACCGTATAAGTGTAATCAGTGTAGCGCTGCTTTCTACAGGCACAGTGACTATACTGCTCACATGAATTCACATAGGAATGTTAGACCGTATACTTGTAATTACTGTGGGGCACAGTTCATTAGGAAGTATAATTGCTTGAGACATGTCAAGGAGCATGAGGAGAATAAACAGTATACTTGTGATGTTTGTAATAAGACTTTTCACAGGTCTTATTATCTTAAGGAACATTTGAGGGTTCACAGTGGGGCGAGACCTTATACTTGTCATATTTGCGGGAAGAGCAGTAGTACGAAGAGCAATCACAATAAACATGTCAGGATTCATCATGCTAGGGAACCGGTTAATACGGAAAATTGA
- Protein Sequence
- MDLNLASDTGGAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASSTSASPLPTLPSPSPSQLPQSSSQTSPSQPGVSQGQSHLPQSSYPIGPVFEYPPLNAMMPPQFASFSYQQFVNNGTMMIPQYSIPPPPQANQMMQMLYNPYNMYQQQQVPTVQMLSPVTTIPTTRIRPVVTVAESISRSIMIPSSQEGKAIIPEMMESDESILPDIEPPETAERTGEDRQTEDRGQQTLPRRSPHEPPAQKDDEEDEGESIVPEIEEPRDEHVLQRPEYPKEREERAEKTTEGREEQPSEKEAPSPAEEAGKSLKINMRVEIPQQGEVEHLERFLMNIMEANPERSEPPKKPEASHEPPAGAGEGSQADSGGALALEIDYKALEAPYRYRSSLSAPASPMGEKKAQQSFSRSEFGSIENLNLYPVGFDAAALQELEDDNREEEDEEEEGDEKNVPDNFEEEDMEIEEIASPHTPFAKGSEENRSRTPLSTISGISGLKVRTDLSKPGSPASVQSFRGLNGESDDEGEDHQKNPLDCSQGEAEDAGRRFDPGCHQSVITEHVSSFPVLSNQQGSSESFSPASGKGQGQDLTAIEGLDPTTSDSKSFQSIAKTINQIPTTELLNINEDAHSGPMNVFEFDGLQILVPSTFISESSQKAISATSQQSMASSEGGAGIDEEVKSVNMRADETMPPRGELSEQESNGCTEHSAWQLYVGQESSRMSTSYDLMARESWEESEGSDNESGVPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCSLCTEVFDCPKERRVHSTTVHKEAGPSNSSSNSGPLETPEAKDIKLLEGRMNVFEEIFVPGIHVPTYHQSQPPLLHQLQPPQQPSDLTKPDGDEKAETPTGLEISCAMCSQRFASERSLQVHNRRVHGTEVAKRLHDISKCQICNEEFPSVVQFNAHLKIHPLECSQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHMNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKRKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLSVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPYKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKQYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00438937;
- 90% Identity
- -
- 80% Identity
- -