Dall010308.1
Basic Information
- Insect
- Diachasma alloeum
- Gene Symbol
- -
- Assembly
- GCA_001412515.3
- Location
- NW:1898481-1941468[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 35 0.63 48 4.1 3.7 1 23 267 289 267 289 0.95 2 35 0.019 1.4 8.9 4.8 2 23 389 410 388 410 0.97 3 35 1.3 98 3.1 3.2 1 20 419 438 419 442 0.93 4 35 0.019 1.4 8.9 2.6 1 23 453 476 453 476 0.96 5 35 1e-05 0.00079 19.2 1.3 1 23 482 505 482 505 0.95 6 35 0.031 2.3 8.3 0.8 3 23 512 533 510 533 0.94 7 35 0.00047 0.035 14.0 0.2 1 23 538 561 538 561 0.97 8 35 3.9e-08 3e-06 26.8 0.4 2 23 568 589 567 589 0.97 9 35 3e-06 0.00023 20.9 0.9 1 23 595 617 595 617 0.98 10 35 9.2e-07 7e-05 22.5 0.1 1 23 623 645 623 645 0.98 11 35 0.0012 0.091 12.7 0.1 2 23 894 916 893 916 0.91 12 35 0.81 61 3.8 0.3 1 23 928 951 928 951 0.94 13 35 0.0068 0.51 10.3 3.7 1 23 964 987 964 987 0.94 14 35 0.00025 0.019 14.9 5.8 1 23 993 1015 993 1016 0.95 15 35 0.045 3.4 7.7 0.5 3 23 1023 1044 1021 1044 0.94 16 35 0.0012 0.089 12.7 0.4 1 23 1049 1072 1049 1072 0.97 17 35 5.4e-07 4.1e-05 23.2 0.4 2 23 1079 1100 1078 1100 0.96 18 35 1.8e-06 0.00013 21.6 0.3 1 23 1106 1128 1106 1128 0.96 19 35 6e-05 0.0045 16.8 1.0 1 23 1134 1156 1134 1156 0.98 20 35 0.0056 0.42 10.6 0.8 1 23 1281 1304 1281 1304 0.93 21 35 0.0033 0.25 11.3 2.7 1 23 1309 1332 1309 1332 0.96 22 35 0.00056 0.042 13.7 1.9 1 23 1389 1412 1389 1412 0.94 23 35 0.013 0.99 9.4 0.7 1 23 1417 1439 1417 1439 0.98 24 35 1e-06 7.7e-05 22.4 0.1 1 23 1446 1468 1446 1468 0.98 25 35 2.8e-06 0.00021 21.0 1.8 2 23 1475 1496 1474 1496 0.98 26 35 1.7e-06 0.00013 21.7 0.2 1 23 1502 1524 1502 1524 0.98 27 35 0.076 5.8 7.0 5.7 1 23 1576 1599 1576 1599 0.96 28 35 9.6e-06 0.00073 19.3 0.2 1 23 1605 1627 1605 1627 0.97 29 35 0.4 30 4.8 7.7 1 23 1633 1655 1633 1655 0.97 30 35 0.028 2.1 8.4 1.5 1 23 1661 1683 1661 1683 0.97 31 35 0.0005 0.038 13.9 1.0 1 23 1689 1712 1689 1712 0.96 32 35 0.014 1.1 9.3 0.1 3 23 1730 1750 1729 1750 0.96 33 35 1.8e-05 0.0014 18.4 0.2 3 23 1758 1778 1757 1778 0.98 34 35 2.8e-05 0.0021 17.8 1.0 1 23 1784 1806 1784 1806 0.98 35 35 0.00021 0.016 15.1 0.8 1 23 1812 1835 1812 1835 0.96
Sequence Information
- Coding Sequence
- ATGTCATCCTACGACTGTATGGACTTGTGCCGTTTGTGTCTCGTTAAGGATCGTGTTTCCGTGCCAATATTCGAGGGTGAGGGCGATGTGCGAcagatttttctcaaaatcgCTGCCTGCCTACCGGTCAAGGTAGGAAGGGACGACAAATTGCCCAAGAAAATATGCGACGACTGTGTGTACAAAGTAGAATTACTTTACGACTTTTGGAATACAACAGCTAACGCTGAGAAACAGTTACTACAATGGTTAGGGGAAGATGGAGAGGACAAACAGGGTTACGTGTCGAGTGTTATGAATTCAGAACTGATGAAGCAAGAGACTGCAGAGAACAGACTGGACAGCTCAGCGATGCAGACAGAGGAGCACCAGAACAACATGAACATGAACATGATGGACCAAATGGGACTGACAATGCCAATAATCATGTCCACAGACCAGCAACAAATCACCTCAGTACCTATGGCATCGAGTGGAAATAATATTCAAGCTGTACCTGGTACAAGTTCACAATCGTCTAGGGGAAGGAAGAGTGGAAACAATGAGGATGACGAGGAGGAGAGCGAGGAGGATGAGAATTCCGACGACGAGTGTGATAATGATGGAGgaataAATGTGAAAGAGGAAGCCCCAGACACTGGTAGAAACGTGGAGCCATCGTTCGTCAACGTATCAATACCCTGTGACGAGGCTGGACCGTCTGGCCTCCAGCAACAGAAGCTCACAGAGATGCCTGAAATGGTAATGGCCCAATCATCAGAAGGCGATCCCAAGTCTGGAGCACGAACTCCAGGAGTCCACTTCTGCCAGAAATGTCAGATAGAATTCCCCCTGGAGAGGATGATGAGGCGCCACAGGAGATTTCACACGGCGGCTATGAATAAAAACCTTCAGAGGGATCCTCTAACGACGAGCAAACCCACGAGACTGAGAGTCCACGAGAAACCATGTGAAGTCTCCCCCCAActtgggaagaaaaaaatcaccaaaaccTCGTCCTCATCGTCCTTAAAGCAAGAAAGCCCAGAAGTCATTGAGGAAGAAGCCCTGGAGGAGGACCTCCTCGAGGAGATCGAGTCGTCCCTTCCCCAGGACCCCTCGAAACCCAGCATGGAGGTCTACAGGATCACCCTCCGCCCCAAGAagcccaccccctcccccctgaaATGCGACATGTGCAGCTACTCGTGTTCAAAACGAAACACCCTCTACGCGCACAAGCGAAAGCACAGCCTGGGGGTTCAGCCGGAAGTCTTCTGCTGTGGTGAGTGTCCCTTCAAGACGACGAAGAAGGCCTCTCTGTACTCCCACCTCTGGAAGAAGCACAAGGACCCGAAGGAGAAGGAGCCCGAGCTCTTCTCCTGCAGTCAATGTGACTACAAAAACAAGAATAAGTACGAGTTGAAGGTGCACATAACGAGGAAGCACACTGACGACTACAAATTCTCGTGTGAAACCTGTGGTAAGAAGTTCAAAGTGAAAGGGGATTTGACGAATCACGTGAGATTCACTCACAGAGAGCAGCCGGTGATCTGCGACGTCTGTGGGAAAACCTGTCTCAACAGCAATTCTCTCTACGTGCACCAGAAGTTTGCGCACTACAAGGCGAAATACGAGTGCCCAATCTGCAAGAGACGAATGGTAACTCAGGAGAACCTCGACGAGCACATGCTCCGACAGCACGAGAAGAGGGAGAACGTCGTGTGCGAGGAGTGTGGAAAGTCATTCTCGAGGAATAGCAGACTCAAAGTTCATATGAGGATTCACACTGGGGACAGACCGTACATCTGTCATGTTTGTAATAAGGCTTTCGCGAGGAGAACAGCGTTGAAGCAACACCTGTTGATTCACACTGGGGTGAGACCGTACGTCTGTGACATCTGCGGAAAGGCTTTCACACAGAAGCCAGGGCTTATCAGCCACAGAAAGTCACATCCTGGGACGCACGACAATCACGGCCTCTTCATCTTCGATCGCGCCTCAGTGGTAATGCGAAAATGGCAGATACTGGAGTTCGACGGAAAGCCCTACTACGCCTTCGTCCCCGAGAACGAGGAGCCCCTGGACCCCGACGATATCCCAAGCCTGGACGACCCCGAGGAGCCCCCCAGCACAACAAAACTGAAGCTAGAGGCTCTAGAATCCGACGAAGAAGCCCTGGAGAACGACGAGAGCTTCTACGACTACCAGCTGTCGTCCCCCGAGGACCAGGACCCCGAGGACTCCTCCCAGGACGTGAAACCCATTCTCCTGAACGGAATAACAGACACTGGAAAATCCGACGAGGGGGATTTGTACCAGGTGAAGATCGAGGGTAGTGTTATCACGCTGGAGAAGCTAGCAGAGGACGTGCAGGCCTCAAAATCATCGGAGTCAATTCTCCCGGAGCTCGAGGATGACCAGACGGCCGACGAAGACGCTCACCAGGAGCCCTCGGACCACGAGGAGCCCGACAGACTCGAGGACGACGAGGAGCAGCCCCAGGAGGTGCCGAATTACGAGAAGAAACGCGAGCTAGAGGCGATTGAATTCGTGGGAGTCGACGCCGAGGACGAGGACGAGGAGCAGGTGGACGACGTCGAGGCCGTTTCCCAGAAGTCGGAGGTCTCCCCTCAGGCCTCGACGAAGCAGAAAAAAACTAGGTACAGGCAGGCGTTGCCAACAGCCTCAGTAACGCTCAAGTGCAAGGTCTGCGGGGAGACCTTTGGCTCGGCGATAGCCTTCAGGAAGCACGTGGCCTGGACCCACAAGAAGAAGGTCTGCATCCAGGAGGACGGGGCCTTCATCTGCGCGGTGTGCGACTACAGAACCCTGAAGAAGAGTCTGTTTGCAGCGCACCTCGAGAGGAAGCACGAGACCTGGCCGAGGAAGGGCCAGGGGACTCTGGTGTTTCCCTGCGCTGTCTGCGGTTTCGTCTGCAGGTCCAAGCACTCCCTCCAGTCCCACTTCATCAGAAAGCACACGGACAAGTACGAGCACCAGTGCAAGTTCTGCCCCAAGAAGTTCAAGGTCAAGGGGGATCTGACGAACCATGTGAGGTTTCATCACAAGGAGAAGCCGATTAATTGCGACGTTTGTGGGAAACTCTGTCAGAACACTGGGTCTCTGTATGTTCACCAGAAGTGGGCGCATTACAAGCCGAAGTACGAGTGCTCAATCTGCAAGAGGAGGATGGTGACTCAGGAGAACCTCGATCAGCACATGGTGACGCAGCACGAGAAGAGGGAGAAGATCGTTTGTGCGGAGTGTGGGAAGACCTTCACGAAAAAGGATTCGTTCAAGAGGCACATGGCTGTGCACACTGGGAGCAAGCCTCACGCCTGTCCAATTTGCTCGAAACCGTTTGCCAGGCAGTCTCAGCTGAGACAGCACGTGCTCATTCACACCGGGAAGAGGCCTTTTGTGTGCGATATCTGTGGGAAGGCGTTCACTCAGAAGCCGGGGCTAATCTGCCACAGGAAGACACATCCCGGACCTCATCCACCCCTTCCTGTCATGCCTATTGCGGATTTGGTGAATGAGTTCACGGCTGAGTACCTTCAGGAGACTAGCAATGTCGGGCAAGAGgacgaggaggaggaggagctcgagggggaggaggaggaggaggtcGAGCAGATCGACGAGATCAGCGAATACGCGCCGATGCCCTACATCAAAGTGAAGCAGCTGAAGGACCTGCAGGAGACGCCCCCCCAGCCGCCCCTCATGAAGAATCTCCTGCTGATGGACGGTTACAAGCTGAAGCTCACGTGCAAAGTCTGCGCCGACGTATACTTCGGGGCATCGACAGACCCCGCAGCCCGCGAATTCGCTCGAGTCCACCAGAATGTTCACAGCCACAAGTGCCTCATCTGCCCGAAGAGGTACCTCCGCAAGGAGAACCTAGTGGCCCACCTGTCTGACTCCCACAGAGGCGACTGTTTCTTCTGCGACAACTGTCCTCACGCAGTGCGGGACAAGAATTTTCTGATAAGACACATGAAGAAGAAGCACCCCGAACTAGTCGACGAAGAGGACATGAGCGATAAATACAAGAGTCTGAAGCAGCTGAGAAACCGCGAGGTGGTGGTTTACCAGAATCGTCTGCCCACCGAGATGAACAGTGGCCTGAAGCAGTTGAGAAACCGCGACGTTCTGGTGAGGGAGGAGAAGGAGGAGAACTTCGTCTGTCACCACTGTGGCTACGTGACAAAGGACAAGGCCAAGTTGGCGAGCCACGCGGCCCGGTACCACAACCAGCAGAAGTATCCGTGCAAGAAGTGCAAGAAGATATTGCTGACGCAAGAGGGTTTTGAGAAGCACATGGAGAGCCACAAGCAGCCACCAAAGACGTACACCTGCGACGAGTGTGGAAAAAACTTTGCGGGAGCCTGGAATCTCAGGAAGCACATTTTGTCGCACAGTGGGGTGAAACCACAACAGTGCACCATTTGCGAACGCAGGTTCTCGTCGAGGAGCTCGTTGAGGCAACACTTGTTGACGCACACGGGGAAGAGGCCGTACGAGTGCGATATCTGTGGCAAAACGTTTGTGCAGAAGCCAGCGTTGACGGGACATCGCAGACAACACGGGGGCAAACTTCCACCCATGCCCAAAGTTTATATTGATTCTTTTATTAAGGAGGTCGCTCCCAGTGCTATCAGCCACCTTTCGAAGACACCGGTGGAGCaaaatttcagattccCCAGAAAGCGTTCGACGAAGAAAAATCCAAGAACGGGTCACAAGTGTTCCCACTGCAGCGCAAGTTTCTCCCACGTGATGAAGCTGGTGGAGCACCTGAAGAACACCCACAGCGTGACGCACGCCTTCAGCTGTGACGAGTGCGGAAAGACATTCAGAAGCCCAATGAACATCGCAAGACACAAGATCATTCACTCGGGCGTGAAGAAGTACAAGTGCGATTTGTGTGACTACAGCTGCCACCAGAAGACAAACCTAGAGTTCCACAAGAAGCGACACATGCGGGACTTCGGATTCAAGTGCAATCTCTGCGAGAAGGCATTTCTCTTCAAGTGTGAGCTGCTGGCTCACGAGAATGTCCACAAGAATATAAAGGCTTTCAGGTGCGAGCAGTGCGGAGCTGCTTACATCCACAGGAAGAACCTGCTGGTCCACGAGAGGCAGTATCACGGAGAGAAGAAGAACAGTGGAGCTGTCCAAAAGAAGTCCTCGAAGGTCCTCTGCGCGACCTGCGGCATGAAGCTGTCCAGCAGGAGCGCCCTGAGGGCTCACGAGACCATTCACACAGGCGAGAAGAAGGAAATCTGTGATATTTGTAAGAAGGGGTTCGCCACAAAGTCGGGCTTAGTCGTCCACAGGAGGAGTCACACCGGGGAAAAACCGTACAGCTGCAACCAGTGCAGCAGGGAATTTGCGCAGAAAACGTCTCTCATCATTCACCTGAGGTACCACAACAACGACAGACCTTATTCCTGCAAGAGATGTGGGAAAGGATTCGTCTCGAGGACTCGTCTTACTAGTCACGTAATCAAAGTTCATGGGGTGGTTTGA
- Protein Sequence
- MSSYDCMDLCRLCLVKDRVSVPIFEGEGDVRQIFLKIAACLPVKVGRDDKLPKKICDDCVYKVELLYDFWNTTANAEKQLLQWLGEDGEDKQGYVSSVMNSELMKQETAENRLDSSAMQTEEHQNNMNMNMMDQMGLTMPIIMSTDQQQITSVPMASSGNNIQAVPGTSSQSSRGRKSGNNEDDEEESEEDENSDDECDNDGGINVKEEAPDTGRNVEPSFVNVSIPCDEAGPSGLQQQKLTEMPEMVMAQSSEGDPKSGARTPGVHFCQKCQIEFPLERMMRRHRRFHTAAMNKNLQRDPLTTSKPTRLRVHEKPCEVSPQLGKKKITKTSSSSSLKQESPEVIEEEALEEDLLEEIESSLPQDPSKPSMEVYRITLRPKKPTPSPLKCDMCSYSCSKRNTLYAHKRKHSLGVQPEVFCCGECPFKTTKKASLYSHLWKKHKDPKEKEPELFSCSQCDYKNKNKYELKVHITRKHTDDYKFSCETCGKKFKVKGDLTNHVRFTHREQPVICDVCGKTCLNSNSLYVHQKFAHYKAKYECPICKRRMVTQENLDEHMLRQHEKRENVVCEECGKSFSRNSRLKVHMRIHTGDRPYICHVCNKAFARRTALKQHLLIHTGVRPYVCDICGKAFTQKPGLISHRKSHPGTHDNHGLFIFDRASVVMRKWQILEFDGKPYYAFVPENEEPLDPDDIPSLDDPEEPPSTTKLKLEALESDEEALENDESFYDYQLSSPEDQDPEDSSQDVKPILLNGITDTGKSDEGDLYQVKIEGSVITLEKLAEDVQASKSSESILPELEDDQTADEDAHQEPSDHEEPDRLEDDEEQPQEVPNYEKKRELEAIEFVGVDAEDEDEEQVDDVEAVSQKSEVSPQASTKQKKTRYRQALPTASVTLKCKVCGETFGSAIAFRKHVAWTHKKKVCIQEDGAFICAVCDYRTLKKSLFAAHLERKHETWPRKGQGTLVFPCAVCGFVCRSKHSLQSHFIRKHTDKYEHQCKFCPKKFKVKGDLTNHVRFHHKEKPINCDVCGKLCQNTGSLYVHQKWAHYKPKYECSICKRRMVTQENLDQHMVTQHEKREKIVCAECGKTFTKKDSFKRHMAVHTGSKPHACPICSKPFARQSQLRQHVLIHTGKRPFVCDICGKAFTQKPGLICHRKTHPGPHPPLPVMPIADLVNEFTAEYLQETSNVGQEDEEEEELEGEEEEEVEQIDEISEYAPMPYIKVKQLKDLQETPPQPPLMKNLLLMDGYKLKLTCKVCADVYFGASTDPAAREFARVHQNVHSHKCLICPKRYLRKENLVAHLSDSHRGDCFFCDNCPHAVRDKNFLIRHMKKKHPELVDEEDMSDKYKSLKQLRNREVVVYQNRLPTEMNSGLKQLRNRDVLVREEKEENFVCHHCGYVTKDKAKLASHAARYHNQQKYPCKKCKKILLTQEGFEKHMESHKQPPKTYTCDECGKNFAGAWNLRKHILSHSGVKPQQCTICERRFSSRSSLRQHLLTHTGKRPYECDICGKTFVQKPALTGHRRQHGGKLPPMPKVYIDSFIKEVAPSAISHLSKTPVEQNFRFPRKRSTKKNPRTGHKCSHCSASFSHVMKLVEHLKNTHSVTHAFSCDECGKTFRSPMNIARHKIIHSGVKKYKCDLCDYSCHQKTNLEFHKKRHMRDFGFKCNLCEKAFLFKCELLAHENVHKNIKAFRCEQCGAAYIHRKNLLVHERQYHGEKKNSGAVQKKSSKVLCATCGMKLSSRSALRAHETIHTGEKKEICDICKKGFATKSGLVVHRRSHTGEKPYSCNQCSREFAQKTSLIIHLRYHNNDRPYSCKRCGKGFVSRTRLTSHVIKVHGVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -