Basic Information

Gene Symbol
-
Assembly
GCA_001412515.3
Location
NW:954113-956127[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-10 1.2e-07 31.1 0.1 1 40 21 61 21 65 0.94
2 2 4.5 2.9e+03 -2.1 0.0 11 20 102 111 100 114 0.82

Sequence Information

Coding Sequence
atgaatctgcGCGAAAGATTTACGAAGAAGCACACGGAGTTTCCgattgagaaagaaaaaaggACACGCTGGACTGACGAGGACAAGGAGAAGCTGCTGAGCGCCCTCAAGAAGTATGGTTATAAGGACATTGATAAAATTTGTAAGGACGTGCCGAATAAAACCAAGGGAGCTGTGAGGACATTTATCAGTAAACTTAACAAGGAGGCTCGAGCCTCGTCTTATCTCAGGGAGAGACATGTTGCGCATTGGGTGCACACCGGGAGTATACAAGCGCCAGATACAGTCGTGTCGCAAGCCCTCAAGTTTATTTCTCTGTTTGAGGAGCATCCTCAGCCTGATGAGTGTGCCGGCTGTGATTTTAGAGCACTCTACGCTGTATTATCAAAAGTCACCCTAGGGCATCCCCCTGTAGACATCTCCAGAATGACCCACGAGACGATTTCCTACGTGATGGCCAAGGTAATCCACGAAGTGTGGCCCTACCACCAACCCGAGATCACTGAATACATCGAGAACATGGAGCAAAAGAAGACTCGCAAGACCTACTCTCGACGTTCTCCGAGAGTTGTGGTACCTAAGGTGGAGAGCGATCACCTTCCTTAA
Protein Sequence
MNLRERFTKKHTEFPIEKEKRTRWTDEDKEKLLSALKKYGYKDIDKICKDVPNKTKGAVRTFISKLNKEARASSYLRERHVAHWVHTGSIQAPDTVVSQALKFISLFEEHPQPDECAGCDFRALYAVLSKVTLGHPPVDISRMTHETISYVMAKVIHEVWPYHQPEITEYIENMEQKKTRKTYSRRSPRVVVPKVESDHLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-