Basic Information

Gene Symbol
F54F2.9_1
Assembly
GCA_001412515.3
Location
NW:422927-426114[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.6 4.3e+03 -2.7 0.0 1 9 257 265 257 266 0.83
2 3 1.2e-07 7.8e-05 22.1 0.0 2 38 292 331 291 338 0.88
3 3 4.5e-11 2.9e-08 33.1 0.3 3 45 372 419 370 420 0.89

Sequence Information

Coding Sequence
ATGAATGTATTAATAAACATATTTggtgttttatattttttgagcATTTGTAATTTATCGTCTGCCTGGGATAACGAGGAGTTGGAGGTCTTCGATGTCGTCGAGgagatcaatcaaaatttttatgaacTCCTCGGAGTGCCGCAGgATGCAAATGGCACGACAATTAGAAAAGCATTCCGTCAATTATCTTTACAACTTCATCCAGATAAGAACGATGCAGCGGATGCAGATGTTAAGTTTAGAAATCTCGTGTCTGTCTACGAAGTTTTGAAGGATCCAAACCGCAGAAAACACTACGACAATGTGCTCATCAACGGTCTTCCCAACTGGAGATCCGCAGTATACTACTACCGTCATGTACGGAAGATGGGATTGCTGGAGATGAGTGTGATCCTTTTCAGCATCATCACAATTGGCCAATATCTCGTGGCTTGGGCTGCGTACTTTGAAAAACGCTACACATACGAACAAGTATTAGGTAGTAAACTCCAAAAGCtccaaaagaaaaataaaaaagggaaGATGGAGGTCCCAGACTTGGCAGATATTCTGCAGAAAATTCCAACACCTAGTGTTTACAACACTTTACCCTTCCAATTACCCTGTTGGACATTTTATTCCATAGTTGGAATTCCCTCGACGATACGAGCGATCAGAGACATGATTGAGGAGAGAAAACGCAGAAAAAAAGAGGAAGAAGAGGCTGCCCTAGCTGAGGAGGAGGAGTCTGAACCTGAACCAGTCCCCAGAGGTCCCAGAAGACGGAGACAAGGGTTTACACCTCAAGAGCACAGTGGAAATTCAGCAGAATCCGTTAAGAGAGAATCCACGCGGCCAAATCATGTACACGAGAAATCGAAAATTGTTGGGGGTCTCTGGACTGATGATGATCTTCTTGAGTTGATAAAACTTGTCAAGAAGTTTCCTGGAGGGACTCCAGACAGATGGGAGAAAATCGCTGATACGATGAATAGGACTGTTTATGAAGTGACGCACATGGCGAAGAAGGTGAAGGACGAGGGGCTTAAACCTAGTCAGTGTACTGATGAGCCTCCAGTTGATCCGCAGCCAAAGAAAGTGAAGACACGAGCGGAGAGTATTGAGGGGACTGAATGGAGCCAGGAACAGCAGAAGGCACTGGAGTCTGCTTTGCTGAAACATCCGAAAGGAGCTGTAGGAGATAGATGGGAGAAAATTTCTGCCTGTGTCGAGGGAAAAACAAAGGAGGAGTGCCAACTAAGATATCGACAATTAGTAGAACTCGTAAAAAAGAAGTCGCAACCCCAGGAACAGCCCCAATGA
Protein Sequence
MNVLINIFGVLYFLSICNLSSAWDNEELEVFDVVEEINQNFYELLGVPQDANGTTIRKAFRQLSLQLHPDKNDAADADVKFRNLVSVYEVLKDPNRRKHYDNVLINGLPNWRSAVYYYRHVRKMGLLEMSVILFSIITIGQYLVAWAAYFEKRYTYEQVLGSKLQKLQKKNKKGKMEVPDLADILQKIPTPSVYNTLPFQLPCWTFYSIVGIPSTIRAIRDMIEERKRRKKEEEEAALAEEEESEPEPVPRGPRRRRQGFTPQEHSGNSAESVKRESTRPNHVHEKSKIVGGLWTDDDLLELIKLVKKFPGGTPDRWEKIADTMNRTVYEVTHMAKKVKDEGLKPSQCTDEPPVDPQPKKVKTRAESIEGTEWSQEQQKALESALLKHPKGAVGDRWEKISACVEGKTKEECQLRYRQLVELVKKKSQPQEQPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00687112;
90% Identity
iTF_00728592;
80% Identity
-