Basic Information

Gene Symbol
NCOR1
Assembly
GCA_001412515.3
Location
NW:178684-260145[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-08 1.3e-05 24.7 0.0 3 43 533 573 532 576 0.96
2 2 3e-15 1.9e-12 46.5 0.6 3 46 975 1018 973 1018 0.97

Sequence Information

Coding Sequence
ATGCATCCAAGTCAGAACTACATAAACATCAAGAGCAACAGTCCGGTACCAGCGCGCACTGTAGCCGTCAGTAGTTATGTACAGGGTGGAACTGGTACACCGTCAGCCAGTGGTGTAGGACCACCAGGTAACAGTGGAACTGGATCAACTGCTGGCGTAACTGGCTCTGCCGGTGGTAATTACGTCACAGTGCCGGTGCCAAGTGGTCTTAGATATGTGCATTCTTATCAACCACCACCAGTACCATCCGCCCCCGTCAATCAAACCCCACCACCACCCGGTGCAGCTGCCGCTTACACCAGGGATCCATACAGAAATGCGACATCTAATgTATCGGAGAGGGTGGCGATAAGTGTCAGCAGTAGTCCAGTAACCCAAGTGGGTGTTGGTGTTGGTGTTGGCGCTAATGAATATCCTCCGAATAGCCGGGGTGACCGTCCACGAATATCCCTGTTACCACCAGCATCAGTAGCACcatcacaatcaccaacaaaTGCTGATTATCATGTTACGAGTAATAGGAATCAACGGGTACTGATGCCAATACTCGCTGCTGAACAGTATGGCAGACAAGTGGAAATGGCAACGTTACAGGAGGCACCGCCCTTCAAGAAGATACGTCTTGGTCAGCCCCAGCAACAACCATCCTGTCAGACTATTTCACCGGCCGATGTGTGCATTAAACAGGACCATGTACAGCTGCCTCAACCACTCAGGATAGATACACGGCCGACAGCAGGTGCCTACACACCACAGACAGAGGCTATATCACCTACCCTACCCGAGCCAACAATCCAAGAAGATGCAGCATTTCGTGTTACCAAGGATGAATTGCTTCAGCAAATTGGCAAAGTTGATCGTGAAATTGCTAAACGGGAGGGTGAAATTACGACACGTAGGAAAAAGCTCAAGACATTGGAGGAGACGGCGAATAAACCCCTCGAGCCGAGTGGATTAAAACGACCGGTTGAGGAGCAATCGCAGCCGAAGCATCAGTCACCGGCCCAGAAAATTTATGCTGAAAATAGAaaaaaagCGGAAGAGGCGCATCGGCTATTAGATAGGCTAGGACAGAAGGTAGAGCTGCCGTTGTACAATCAACCGTCAGATACAGATGTCTATCAAGAGAACAAAACGAGGCATCAGACGTGCATGAGAACACGACTTATTGCTAGATTACGTAGGGAACACTCAGAACGTGCCTCACTCCATCGACAACAGGCTCAGACTTATGCGATACTCGTTCAAGAGTGGCATCGCAAGGTCGAGAGGCTAGAGTCAGCGCAGAAGAGAAAATCCAAGGAGGCGAAAAATCGAGAATTCTTCGAGAAGGTATTCCCGGAGTTGAGGAAACAACGGGAGGACAAGGAGCGTTTCAACAGGGTTGGTGCTCGTATCAAGAGCGAGGCTGATCTTGAGGAGATTATGGATGGGCTTCAGGAACAGGAGATGGAGGATAAGAAGATGCGTTCGTACGCTGTTATTCCACCGTTACTGCTCGATGCCAAACAAAGGAGAATTGCATTTCAAAATAGAAATGGTTTACTACAACCTGAGGAGCTGGAGGCACTTCACAGCGAgagaaaattgataaatgtTTGGAGTGCTGTTGAGCATGAATTGTTCAAAGAGAAATATCTACAGCATCCCAAGAATTTTGGAGCTATAGCTCAAAACTTAGAACACAAATCAGTTCCTGACTGCGTGCATCATTACTACCTCACTAAAAAAGCTgaaaattataaacaattgtTGCGAAAGTCGCGACAGAGAACGCGTAGCTCTCGAAATAATCCTAACAATAAGGTAAACAATAGTAGTTCTAGCATTGGACCGATAGATATATTAACGACAGGTGTAACGACGAGACTGCAGCGTGAGCAGCAACAGAAGACCCAAGAGAATCCCCAAAATAATTCGACATCAACCACTACCTCGTCCACAACAACTACTACGAATACACCACcaacagcaacaacaacaacaacaacaacaaccacAACCAGCACACCTAGTTCTTCACAACCAAGTACATCGGTAACAACAAGTAGTAGTAGTGGTACAGCAAGTGATACGGGAATAGTGACAACCGCTGCCTCCGTCCAGAGTACGACGACATCGACAACAACTGTATTAACAACGTCAACGTCGAGCGCCAAAGAGGCGAGAGAAGCTAACAAGGAGaataaagagaataaaaatgataCCAAGGAGTCTGTTAAGGACGTCAAGGAGGACCCCAGTGGGGATTCTACGACGGGGAAGGACACTAAATCAACGGAAAGTTCGGGTGGTAATTCATGCGTGAGTGTGGTGGGTGCAAATGAAACAGTGGTACAAACATCTGAAACGAAGGACAAGAAGAAGCAGGCTGCTGTAGCAGCGACGAATGTTACGAGTAGTAGAACGAAGGACAAGAAGGAGAATCATGCAACACCAATGGAAACGAGTGACGAGGAGGCCCAGACAATTGACCCAATTGAGAGTGGGAGGCAACTGGGTCCCCATGCCTGTGCAATATGCCAAAATGTCGTCGAGGGTGGCAACCAGTCGCGTGCATTGTCACGCAGCCAGGCGTCCCAATATGGTCTTAGGGAGGATCAGGTGCAGCCTGGTGCACGTGTATGCAACACATGCAGGTGTAAAGCTGTACGTGGTCGTTACACTGCCTGTCCACTTCCAGGCTGTCCAAATGTCAATAATGCCAATAATAAGACGAGAGTTAAAAGACTCAGGGCACTGCCACCTAAATGGATGGAATTACCCCCGGAAATACGGGATCCTGTTATTCAAGAATTTCAAATACCAAACAATACCACAAAATGCTGTTCAGCCTGTTTCAACCGAATATCCCGTCGTTTGGCGCCTCACCTGTCAGGTGGTGGTGATGCCACTGATGAAGCGTCTGAATCAATAGCACGACAATGGACAGAAGATGAGCTCAAACAACTGAGACGTGCCCTGCGTGAGCATGGAACAAATTGGCCAAAAGTGTCGGAACAAATACCTGGTAAATCCAATCACCAGTGCAAGAATTACTACCTGACTTATCGTAAGAAATTGGGCCTGGATCAGGTGGTGGCTGAGTACTATCAGTCCCTCGGTGAGGAGAGAAGGCCGTGTTTGACGGATGAGGAGGAGAGTGGTAGTAGTACAAGTAGCTGTGACGAAATGGCTGTGCATGACTCGAGTGATACTGCTAGTGCGGGCAGTCCTGCAAACACAATATCCAGCAGTACACCTGGCTCAATGGGACCATCGACTGGCACTGGAACAATCAATGTCGGTGCATTTCAGCAAGAAAGTACAGCGGATATCAGGATTTCTCTTGTCCCACCGACGCCTGTTGCACCTGGGCCACAGCAGCCCACGACTGCTAGTGGACAGTCGACGAATAGTCGAGAGGATTACGATAGCTCCGCTACGGAGACGGCGGACGAGGGTCAGGGTGGGGCAGATGTGGAAAATGCAAATTCAACAGCACCATTAACAACAACAACAAGTACAAGTACGATATTACAATCACACACGGCCTCACAGTTGCAACAACCAACGCAACGCGAACAACCACCCCCAGGACACTCACCGCCGACAATAAGCAATGCCAATCCACTGACTGTCAAGGATCTCATGTTCGATGTTATTGAGATGCAGCTCAAACGAAATCCCAATAGTACGTCAACGAGTTCAGTAACACCCACGATATCAAGTATTTTGAAGACAGATCACAGAAACGATATCACATTTGTTCGCGAATTTAAGCCATCGTCGAGTTTACCCTCTACTGCCATGTCCAATAGGGACTCGAATTTGGCAACACTATCAGTCGTTTCTGTACCACATCACAGATCAGCACCAAGTCCTCAACAAATTGGTCAAATGCAGGCGACAATAACACCAATGCCCCCAGTGCCCCCACCGAACCAGCCGCCGTCAGCCGACCTCCTCCCAAAGGAGGGTCTCGTAGTGATGCAAGTCCAGCAGGCCCTGCGAGAGACGGAGGGCACCCTCGACCTCAGCATAAAGAAGCCGCGTCAGCAGCCACCCCCTCCCCAATCCCAGCCGCAGCCTCAAGACTACAACCACACCCTCCAGCCTCCCCACAAAGCCCCCCAGATGACGATGTATCGTCCCGAGCCCCCACCTGGTGCTTACTACCACCCGCACGCTCACGAGCAGGGTCGAGGAGCAAAGAGCCCCCTCGTATACGCCTCATCCCCTCGTCCCCAGGCGCCGATCACCCCGAAGATGAACAAAGTCGCAGTGCCCCCACCCCCCCACCCCAAGCTCTCCCCAAAGCTAGCGAACATGGGCACACCCCACAAAGGTGGTTCAATAACCCACGGGACTCCAGTCTCAGGTGCCAGATACGAGGGCCTCCTCCGTCAGATGACCCCACCAGGTACAGCAGCGCCATCAGCCAACCCCCCAGCCCCCAAGGAGTCTGGCTCCATCACGCAGGGCACCCCAGTCCACCCGTTCACCGTCGAGAAACGTCCGATGTACGACTACCATCGTCCCATCAGACACTCCCCAGCGACAACCAATGCCCCACCCCAGAGTCCCAATCCGGGAGTTGTCGTCACCCACAGCAACTACAACTCCTACTCAGCAAGACCACCACCAAGCTACACGATGGAGCAGCAGCTGTCCTCCCGCCAGATAATAATGAACGACTACATCACGAGCCAGCAGATGCACCAGCGTCGAGGCACAAGTGCTAGCAACGAGAGTTCAAGTAAAACCGAGCCCCCACCTGCTACTCTCTACTACACGGGTACCCCACCACCCCCAGCGCCCCCTCAGTCGCACACACAGGCACGACAGGGTGTGATTCAGAGGCACAATCCTCAGAAGCAAATCCATTACCATCCACCACCTGCGGGACTCGAGGCATTTTCGAGTCTAGTCGATGTTGCTGTTCAACAACCCAGTTTACCTGTACCTCATCCCCATGGACATCCTTCCTCGGGGAGTAGTCACGAGGGTCTCGGCAAGACAATGGCAGACCGATTGCTGGCTGATAGGTACGTGGACAATAATCGTGCTTATCGAGAGCAAGAGCTGAGGATTCAGGAGCACAGGATGGCGATGCAGCATGCTGAGAGAATGGCCGCTGCACACCAGCAGCAGAGGGACAGAGAACGAGATTTGGCGCATATTCGGGAGAAGGAGGAGCACAGATTgcagagggagagggagaaggAGTTGCAGCAGTTGGAGCACAGATTAGCTGTGCAGCATCATCAGAGGGAGAAGGATATGCAGCAGGAGAGGATAGATAGGGAGAAGCAATTGCAGCATGAGCACATGATGCAGCAGAGGGAGAAGGAGGAGAGGCTGAGGGAGAAGGAGATTCAGCATCAGAGGGAGCAGATTGCTGCGCATCAGAGGGAGAAGGAACACCAGGAGCACAGGATGGCACAGCAGAGGGAGAAGGAGATTCAACATCAGAGGGAGCAGCTTGCGGTGCACCAGAGGGAGAAGGAGATGAGGGAGAAGCAGGAGCACAGAATGGCTGTGCACAGGGAGAGGGAAATGGCGCATCTTCATCAGCAGCAGAGGATGCAGGAGCAGCAGCAGATGCAGCAGCACATTCTGGGACAGAGGATGGAGGCTGAGAGGCGACACATGGCGCAGATCTACAGGGATCAGCAGCATCAGCACATTGACAGGGAGTCGGGGAGACTACTTGGCAGTGGTTTCTCACAGTCCTCCAGGCCTCAGCAACCTCAACAACCTCCTCCTCAGCAAGCGCCAGCCTCGTCGAGGCCTAGTCCTGCCTCTTCGAATTCTCAGTCTGGAGACAATTCGTCTACACTCACTGCTGCCAGTTTGATCGATGCGATTATCACGCATCAGATCAATCAGAGCTTTAAGAGCACTAGTGGAGCTCCTGCTGTCAATAATCAACCTACTAGGCCGGGCGATAGACTTTTTCAGGGATTCCATCGTGATACTCAAGCCGAACCCAACGGTGTAGCTCACAGTCCAGCGGCTGAGAGTTCCGTAGCCAATAGTGGACCACCCAGTGAACCCCCGAGGGATGGAAAAACAATAACCCTTGGAGAGCACATCGAGCACATCGTCACGAAGGATTATGGACCACCACACGCGTCCTACCGTTCGTACCCAGGTTATCCATTGGCAGACGATCAATGGAAGCGTCGTGAGGCAGATTCTGAGCCTGGCAAGCCTGGTGACGAGCGTCAGATAATCCGTGTGTCCCAGGGACAGCAGCAGTCACAGCCCCCTCCGCAGCCCCAGCAGCCACCCACATCTGTTGCAAAGCAGTTTCACAGCGTAGAGCCAGTATCTCCACCCGAGGCAACCCAGAATCACTACGCGAGACGATTTTACGAGTCTGCAACAGCCACGACAACATCAGCAACGCCTCCCAAGCCCCACCTGTCCCCTCTGGACTACGTGAAGAATAAAATTGTCGAGGTGATGAGGACCTCCGAGGACGACAAAACAACTGGCAGTGGGGAGAGAGGAAGTGGTAATGGCACTGCTGACAAGGATGACAAGCCTGCTGAGAGCCCCTCAGGTGAAATGGTCATCGACGAGAGTCCAAATCCACAGACTCAACAGCCACCACCAGCACCAACGACCTTCTACCCATTCAGTGCACTGGGAGTTCACACAGGACCACCTCCAGCACCTCCTCCACCCACTGCAGGCTCCACAACAGTGACCAAAAGCGAACAGATGGAGCCAACACCACTTCTCTCAGCTCAGTACGAACCACTGTCCGATGAGGATTGA
Protein Sequence
MHPSQNYINIKSNSPVPARTVAVSSYVQGGTGTPSASGVGPPGNSGTGSTAGVTGSAGGNYVTVPVPSGLRYVHSYQPPPVPSAPVNQTPPPPGAAAAYTRDPYRNATSNVSERVAISVSSSPVTQVGVGVGVGANEYPPNSRGDRPRISLLPPASVAPSQSPTNADYHVTSNRNQRVLMPILAAEQYGRQVEMATLQEAPPFKKIRLGQPQQQPSCQTISPADVCIKQDHVQLPQPLRIDTRPTAGAYTPQTEAISPTLPEPTIQEDAAFRVTKDELLQQIGKVDREIAKREGEITTRRKKLKTLEETANKPLEPSGLKRPVEEQSQPKHQSPAQKIYAENRKKAEEAHRLLDRLGQKVELPLYNQPSDTDVYQENKTRHQTCMRTRLIARLRREHSERASLHRQQAQTYAILVQEWHRKVERLESAQKRKSKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVIPPLLLDAKQRRIAFQNRNGLLQPEELEALHSERKLINVWSAVEHELFKEKYLQHPKNFGAIAQNLEHKSVPDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNSSSSIGPIDILTTGVTTRLQREQQQKTQENPQNNSTSTTTSSTTTTTNTPPTATTTTTTTTTTSTPSSSQPSTSVTTSSSSGTASDTGIVTTAASVQSTTTSTTTVLTTSTSSAKEAREANKENKENKNDTKESVKDVKEDPSGDSTTGKDTKSTESSGGNSCVSVVGANETVVQTSETKDKKKQAAVAATNVTSSRTKDKKENHATPMETSDEEAQTIDPIESGRQLGPHACAICQNVVEGGNQSRALSRSQASQYGLREDQVQPGARVCNTCRCKAVRGRYTACPLPGCPNVNNANNKTRVKRLRALPPKWMELPPEIRDPVIQEFQIPNNTTKCCSACFNRISRRLAPHLSGGGDATDEASESIARQWTEDELKQLRRALREHGTNWPKVSEQIPGKSNHQCKNYYLTYRKKLGLDQVVAEYYQSLGEERRPCLTDEEESGSSTSSCDEMAVHDSSDTASAGSPANTISSSTPGSMGPSTGTGTINVGAFQQESTADIRISLVPPTPVAPGPQQPTTASGQSTNSREDYDSSATETADEGQGGADVENANSTAPLTTTTSTSTILQSHTASQLQQPTQREQPPPGHSPPTISNANPLTVKDLMFDVIEMQLKRNPNSTSTSSVTPTISSILKTDHRNDITFVREFKPSSSLPSTAMSNRDSNLATLSVVSVPHHRSAPSPQQIGQMQATITPMPPVPPPNQPPSADLLPKEGLVVMQVQQALRETEGTLDLSIKKPRQQPPPPQSQPQPQDYNHTLQPPHKAPQMTMYRPEPPPGAYYHPHAHEQGRGAKSPLVYASSPRPQAPITPKMNKVAVPPPPHPKLSPKLANMGTPHKGGSITHGTPVSGARYEGLLRQMTPPGTAAPSANPPAPKESGSITQGTPVHPFTVEKRPMYDYHRPIRHSPATTNAPPQSPNPGVVVTHSNYNSYSARPPPSYTMEQQLSSRQIIMNDYITSQQMHQRRGTSASNESSSKTEPPPATLYYTGTPPPPAPPQSHTQARQGVIQRHNPQKQIHYHPPPAGLEAFSSLVDVAVQQPSLPVPHPHGHPSSGSSHEGLGKTMADRLLADRYVDNNRAYREQELRIQEHRMAMQHAERMAAAHQQQRDRERDLAHIREKEEHRLQREREKELQQLEHRLAVQHHQREKDMQQERIDREKQLQHEHMMQQREKEERLREKEIQHQREQIAAHQREKEHQEHRMAQQREKEIQHQREQLAVHQREKEMREKQEHRMAVHREREMAHLHQQQRMQEQQQMQQHILGQRMEAERRHMAQIYRDQQHQHIDRESGRLLGSGFSQSSRPQQPQQPPPQQAPASSRPSPASSNSQSGDNSSTLTAASLIDAIITHQINQSFKSTSGAPAVNNQPTRPGDRLFQGFHRDTQAEPNGVAHSPAAESSVANSGPPSEPPRDGKTITLGEHIEHIVTKDYGPPHASYRSYPGYPLADDQWKRREADSEPGKPGDERQIIRVSQGQQQSQPPPQPQQPPTSVAKQFHSVEPVSPPEATQNHYARRFYESATATTTSATPPKPHLSPLDYVKNKIVEVMRTSEDDKTTGSGERGSGNGTADKDDKPAESPSGEMVIDESPNPQTQQPPPAPTTFYPFSALGVHTGPPPAPPPPTAGSTTVTKSEQMEPTPLLSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00728591;
90% Identity
iTF_00728591;
80% Identity
-