Basic Information

Gene Symbol
Cdc5l
Assembly
GCA_001412515.3
Location
NW:1261222-1268425[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-16 7.8e-14 50.9 1.5 2 46 9 54 8 54 0.97
2 2 9.4e-12 6.1e-09 35.3 0.2 1 42 60 100 60 104 0.95

Sequence Information

Coding Sequence
ATGCCGAGAATTATGATAAAAGGGGGTGTTTGGAGGAACACGGAGGATGAGATTCTCAAAGCCGCGGTGATGAAATACGGTAAGAACCAGTGGAGTAGAATAGCCTCACTCTTGCACCGAAAGTCGGCGAAGCAGTGCAAAGCCCGTTGGTTCGAGTGGCTGGACCCCAGCATAAAGAAGACGGAATGGAGTCGCGAGGAGGACGAGAAGCTGTTGCACCTGGCGAAGCTGATGCCGACGCAGTGGCGAACGATCGCCCCGATAATCGGTCGAACCGCCGCCCAATGTCTGGAGCGGTACGAGTGTCTCCTGGACCAGGCGCAGAAGAAGGAGGAGGGCGAGGACGGCTCGGACGACCCCCGGAAGCTGAAGCCGGGGGAGATCGACCCGAACCCAGAGACAAAACCCGCGCGCCCAGACCCCAAGGACATGGACGAGGACGAGCTGGAGATGCTGTCAGAGGCGCGCGCCAGGCTGGCCAACACCCAGGGGAAGAAAGCGAAGCGAAAGGCCAGGGagaagcagctggaggaggcccGGAGGCTGGCCGCCCTCCAGAAGAGGCGGGAGCTGAGGGCCGCGGGCATCACTGTCAATCAGAAGAACAAACGGAAACGGGGGGTCAACTACAACACGGAAATTCCGTTTGAGAAACGCCCGGCTACCGGGTTCTACGACACCAGTGCTGAGCACATCGACCCTCTGGCTGCGGACTTCTCGAGGATGAGGCAGCAGCATCTGGACGGCGAGCTCAGGGCCGACAAGGAGGAGCAGGACAGGAAGAAGGACAAGCAGAAACTCAAGCAGAGGAAGGAGAACGACATCCCCATGGGGATGCTCAATAATGAGGAGCCTGTGAAGAAGAGGAGCAAACTCGTGCTCCCTGAACCACAGATTTCCGATCAGGAGCTGCAGCAGGTCGTCAAACTGGGTCGTGCCTCAGAGGTGGCTAGAGAAGTAGCCACCGAGAGTGGAATAACCCTCTCGGACAGTCTCCTCGCGGACTACTCCCTCACTCCAAATGCAGCAGTGACCCCTCGCACCCCAGCCGTTACCGACCGAGTCCTCCAGGAGGCCCAGAATGTCATGGCCCTCACCCACGTTGACACCCCCCTGAAAGGAGGCCTCAACACTCCCCTCCACAACGTCGACTTCAGCAGTGTCGTCCCCTCATCCACTGCCATCACCACCCCCAATACAGTCCTCGCGACTCCCTTCAGGTCCACCAGGAGTGACGGTACCCCCCTGAACTCTAGCTTCAACACGCCAGTCTCAGCGAGAACGCAGAATGGCATTCTGGCGCCAACACCAGTAAGAGACAAATTGAACATCAATCCAGACTCTGCTCTCGATGGCTCCGAGACTCCAGCCCTGCAAAAACAGACGAAGGAGCAGTTGAAGCTGGGTCTGAGTGCCCTCCCAGCGCCAAAGAACGACTTTCAGATCGTTATTCCTGAGAACGAGTCCCAGGAGGATGGGGCGAGCAACCAGATGGATCTCGGGGTGGAGGACCAGGCGGACGTTGACGCCAGGAAGCAGCAGGAGTTGTTGGAGCAGAGAGCGAGGGAAATAGCGAAGAGATCGCAGGTGATCCAGCGAGGCCTCCCCAGACCCACAGAAGTTAATTTGAATATTCTCAAGCCTGTGGACGTCAGTCTCAAGAACTTGAAGCCAGCCAAGGACTCGGGGCTGACGGACCAGCAGATCGCCGAGGAGTTGATCAAGAGGGAGATGTTGACTATGCTGCAGTACGATGCTGTCCAGAATCCCACGATAGCAAATTCAAAACGTGGAAATGCTCTCGTTTCGTTGGCTCAGAATTACCTGGATCAGCATCCTTACGAGGATTTTGAGAAGGATGACCTCGAGGGGGCGAGGAGCCTCATTTCCGACGAGATGGAGGTCGTGAAGAAGGGGATGGGCCATGGGGAGTTGAGCCTGGAGGCGTATACGACTGTGTGGGAGGAGTGCTCCTCGCAGATTCTGTTTCTGGAGGGGCAGAAGAAGTTCACGAGGGCGAATGTCGCCTCGAAGAAGGAGAAGATCGAGGCTGCCGAGAGGATTTTGGAGGAGAACAGGGGGCACATGACTGGGGCGGCCAAACATGCTGCGAAGAAGGAGAAGAAACTCAAGATTATGACTGGGGGGTATCAGACGAGGGATCAGGTCCTCACGAAACAGCTGCATGACACTTATGAGCAGATTGAACAGGAACAGCTGCAGCTCTCGACTTTTAAGTTTCTTGAGAAGCAGGAGAAGGTGGCACTCGAGAGGAGGCAGAATGCTTTGACTGAGGATGTCAACAGGCAGATTGAGAGGGAGAGGAGTCTGCAGCAGAGGTATGCAGAGCTGATGGAACAGCTGCAGCAGGCGAGGGTCGGCGAGGATTGA
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYECLLDQAQKKEEGEDGSDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGITVNQKNKRKRGVNYNTEIPFEKRPATGFYDTSAEHIDPLAADFSRMRQQHLDGELRADKEEQDRKKDKQKLKQRKENDIPMGMLNNEEPVKKRSKLVLPEPQISDQELQQVVKLGRASEVAREVATESGITLSDSLLADYSLTPNAAVTPRTPAVTDRVLQEAQNVMALTHVDTPLKGGLNTPLHNVDFSSVVPSSTAITTPNTVLATPFRSTRSDGTPLNSSFNTPVSARTQNGILAPTPVRDKLNINPDSALDGSETPALQKQTKEQLKLGLSALPAPKNDFQIVIPENESQEDGASNQMDLGVEDQADVDARKQQELLEQRAREIAKRSQVIQRGLPRPTEVNLNILKPVDVSLKNLKPAKDSGLTDQQIAEELIKREMLTMLQYDAVQNPTIANSKRGNALVSLAQNYLDQHPYEDFEKDDLEGARSLISDEMEVVKKGMGHGELSLEAYTTVWEECSSQILFLEGQKKFTRANVASKKEKIEAAERILEENRGHMTGAAKHAAKKEKKLKIMTGGYQTRDQVLTKQLHDTYEQIEQEQLQLSTFKFLEKQEKVALERRQNALTEDVNRQIERERSLQQRYAELMEQLQQARVGED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00168353;
90% Identity
iTF_01273710;
80% Identity
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