Dall009948.1
Basic Information
- Insect
- Diachasma alloeum
- Gene Symbol
- lov
- Assembly
- GCA_001412515.3
- Location
- NW:259462-274790[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-18 4e-15 54.6 0.0 1 44 504 547 504 548 0.96
Sequence Information
- Coding Sequence
- ATGTCGAGCACCGCGGAGAGTCCCGACGGTGGTATGGCACTGCAGTCACACTATTCACTGCGATGGAACAATCATCAGACACACATACTGCAGGCATTTGAAGCACTACTACATGCTGAAATACTCGTCGATGTCACTCTCGTGTGCTCGGACAGTAGTATCAGGGCGCACAAGGTCGTCCTCAGTGCCTGCAGTCCTTTCTTCGAGAGGATATTCGCTGAGCACCCATGCAAACACCCGGTGATAGTCCTGAAAGACTTCCCAGGTCGTGAGGTTGCCGCCCTGATAGACTTCATGTATCGGGGTGAAGTGCGTGTCGGCCGCGAAGAGCTTCCGGGTCTGATGCGTGCAGCAGAGAGTCTCCAGGTGCGTGGTCTAGCCTCGTCCGAGCCTCGGCCAGCATCGCCTCCCGACACCCCAGTGGAGACACCCACCGACCTCCTGGGCGACCGCCTCAGCCCAGAAGGTGATCACGACGCGGACACCGATTCGATTCAACGCGAGTCGCGAACGATATTCACCCGTGACCGCGATCGGGATCGCGACCGCCTCCCCCACATGGGTCACCTGAACTTCTCCCTCCGCGAGTTACGCGAGTCCTGCAACTCGCCGCTCCTACCACGGCGGAAGCAGGCACGACCAAGAAGAAGATCGGGGGAGTTGATCCCCCAGGATCTGTCGCGACCGCATCCACCCGCGAGCCTGAGTCCGCCGTGTGGTCTCAACCTGACTGGAGCCCTGCCAAGTAACCCGAGTCAGCCAACAGGCAGCCAAACCCCAGGTCAGTCACAGATTCCGCCACCCCAGGCGCCGCGTACCCCATCCCAAACGAATCCACCGTCAACGCCGACGAATCGCGAGGAGACCGCGGAGAATCTCTCGATGAAGCGTTCCCTCTCCCCAGGGCTTCCCTCCGAACAGGGCATCAAGACTGAGAGCGAGGCAGCTAGCAGTCCGCGTGGCTCACCAATGACCGGTACAAGCCTCCATCCGGACGGCTCCTTGCAGGATCTTCCTACCCCAGGTTTACCCTCAATGTCACTGTCCCTAACCCCACCACATCATCCAAGCGAGTACCTGACGTCACTAGGCCAGTTTGCCGCCCAATGGCTGCCAAATCATCAGAGCCAAATGGCACACAGGGACGGCAGTCCCCAGGGGCACAATCGTAATCCGCATTATCATCAGGAGCAGATGACACCAACAAGAAGATCTGTCGCGGTATTCCCCATGGATGGTGTGTCACCGTTGACCAGTGGCGGACTGTTTCCACATGGTGGTGGATTGGAGAGAGGTACATTACTCACGGATTTGCATGATAGCTTCAAGCCGGAGGCCTTTCAGGGACTGTTCGGTGGTAATCTGGGTCATCACATCACCAAGAAACCAAAGAAGCACAGGGGGGATGGGGACTCGACTAGGAGGTGGTCGGAGCACGGCAGGGGAATGCCCATTGGCAGGCCCAAGGGACAGCACAGCGCACCGCGGGGTGGACCGCCAAGGTCGTGGACCAATGCTGAACTCACGGAAGCGTTGCAGCATGTTTGGAACAAGAAGATGACGACTTCACAGGCCAGCCGGCTCTTCGGCATCCCTTACAACAGCCTGCTCATGTACGTCAGGGGAAAGTACGGAAAGAGTCTCAAGCTCGAGCAACTCAGGAGGGACTGCACTGGCGCCACCACCGGCGAAGTCATGAACTCGTTGAACAACAATGTCAAGGCCATTCAGCCACCCTCCCAGATGGGACATCCTCTTGGGATGCCTCATCCTGGCGACGAGTCTTACAGCCATCATCCTCTTCTTGGCGGCAATTTGCCCCAGGGATTCTTTCCGGATTTTGGGGCTGCCTTTCCTGTTCCTGTTAGCATGGTTCATCTACTACCGCCTAGTGAACAAAAGGCATTCGAGGGGGTGGGCGGCAGTGGGGGCGGGGGTAACAGTGATCTTGGACAACAGAGTCGGTCACCATCGCCCAGTCAACATGACAGTATTCAACCACCACAATCAGCTCCGGCGTTACTGCAGCAGAATGGATCGGAATGA
- Protein Sequence
- MSSTAESPDGGMALQSHYSLRWNNHQTHILQAFEALLHAEILVDVTLVCSDSSIRAHKVVLSACSPFFERIFAEHPCKHPVIVLKDFPGREVAALIDFMYRGEVRVGREELPGLMRAAESLQVRGLASSEPRPASPPDTPVETPTDLLGDRLSPEGDHDADTDSIQRESRTIFTRDRDRDRDRLPHMGHLNFSLRELRESCNSPLLPRRKQARPRRRSGELIPQDLSRPHPPASLSPPCGLNLTGALPSNPSQPTGSQTPGQSQIPPPQAPRTPSQTNPPSTPTNREETAENLSMKRSLSPGLPSEQGIKTESEAASSPRGSPMTGTSLHPDGSLQDLPTPGLPSMSLSLTPPHHPSEYLTSLGQFAAQWLPNHQSQMAHRDGSPQGHNRNPHYHQEQMTPTRRSVAVFPMDGVSPLTSGGLFPHGGGLERGTLLTDLHDSFKPEAFQGLFGGNLGHHITKKPKKHRGDGDSTRRWSEHGRGMPIGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRLFGIPYNSLLMYVRGKYGKSLKLEQLRRDCTGATTGEVMNSLNNNVKAIQPPSQMGHPLGMPHPGDESYSHHPLLGGNLPQGFFPDFGAAFPVPVSMVHLLPPSEQKAFEGVGGSGGGGNSDLGQQSRSPSPSQHDSIQPPQSAPALLQQNGSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00046351;
- 90% Identity
- iTF_00438212; iTF_01273701; iTF_01273904; iTF_01273014; iTF_01273206; iTF_00438872; iTF_00438672; iTF_00728761; iTF_00728582; iTF_00351260; iTF_00350921;
- 80% Identity
- iTF_00438212;