Basic Information

Insect: Diabrotica virgifera
Gene Symbol: Zfpm1
Assembly: GCA_003013835.2
Location: ML015049.1:602120-612901[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.015 3.9 10.8 0.7 1 23 678 701 678 701 0.91

2 14 0.044 11 9.3 0.3 3 23 779 800 777 800 0.93

3 14 0.31 81 6.6 2.0 1 23 811 833 811 833 0.98

4 14 0.00071 0.18 15.0 1.7 2 23 836 857 835 857 0.97

5 14 0.064 17 8.8 2.1 1 23 863 885 863 885 0.80

6 14 0.00028 0.073 16.2 3.5 3 23 893 914 891 914 0.95

7 14 0.24 62 7.0 1.1 5 23 927 945 926 945 0.95

8 14 0.014 3.6 10.9 4.7 3 23 952 973 951 973 0.97

9 14 2.6 6.7e+02 3.7 0.1 2 23 989 1009 988 1009 0.94

10 14 0.00051 0.13 15.4 1.6 1 20 1015 1034 1015 1037 0.92

11 14 0.00013 0.034 17.3 0.4 1 23 1045 1067 1045 1067 0.99

12 14 0.0041 1.1 12.6 3.2 1 23 1073 1095 1073 1095 0.97

13 14 1e-06 0.00026 23.9 3.5 1 23 1101 1123 1101 1123 0.98

14 14 0.0019 0.49 13.6 7.2 1 23 1129 1151 1129 1152 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.015	3.9	10.8	0.7	1	23	678	701	678	701	0.91
2	14	0.044	11	9.3	0.3	3	23	779	800	777	800	0.93
3	14	0.31	81	6.6	2.0	1	23	811	833	811	833	0.98
4	14	0.00071	0.18	15.0	1.7	2	23	836	857	835	857	0.97
5	14	0.064	17	8.8	2.1	1	23	863	885	863	885	0.80
6	14	0.00028	0.073	16.2	3.5	3	23	893	914	891	914	0.95
7	14	0.24	62	7.0	1.1	5	23	927	945	926	945	0.95
8	14	0.014	3.6	10.9	4.7	3	23	952	973	951	973	0.97
9	14	2.6	6.7e+02	3.7	0.1	2	23	989	1009	988	1009	0.94
10	14	0.00051	0.13	15.4	1.6	1	20	1015	1034	1015	1037	0.92
11	14	0.00013	0.034	17.3	0.4	1	23	1045	1067	1045	1067	0.99
12	14	0.0041	1.1	12.6	3.2	1	23	1073	1095	1073	1095	0.97
13	14	1e-06	0.00026	23.9	3.5	1	23	1101	1123	1101	1123	0.98
14	14	0.0019	0.49	13.6	7.2	1	23	1129	1151	1129	1152	0.96

Sequence Information

Coding Sequence: ATGAACTTGCAGATCAGCATGCTAAAACGGCTTCAACAGATACCACGTCAACAACCCACATCCGGTAAAGATTTGAAAACAGAAGCGTACAGATTCACATGGAGATTATGGCAAACCCACTGGAGCTCCTTAAATACATATTTACGTGCAATCCAGCCCTCAGTATATAAGCCACTTTACACTGGCCCCACAGGACTCTCTAGACAAGACCCTGATGTCATCAGATATCCGGCCTATCTGTTTAACATGCCAGTGCCAACTTACCGTGAACCACATTATTACCGAATGTCATCAGTTCAGTGTAGTGCAGTGGTGTATTTGATTGATATAGTTACCCCGAGTGTTATCAATCCTCCTACACAAGAAGTTGCACCAACTGATAGTAAATTCTTGCGGATTGTATTACAAGCTGACATTACTATTTCAAACAAAACAAacgCAAATTCATCGATATTGAACCAATCATGGAATCAGCCAACACCAGTGCAATTGGGCCCTCCCCCAAACGTATCTCCTGTACATGGAAACCACGTTTTCATTTATCAGCAAAGTATGAGCACAACTTCTCCCCAGGGAAATGTGCTACAAGTAAATCCTCTGTCGCCACAATATCTCTATCATCCTTCAATTTATAATCCTCAGATGATGCCATATGTGTATCAACAACAGCAGGTAATTTTGTCGAGTAATTCTTTGCATCCTCCCCAAATGAGGGCACTACCGTTTGAATTACCCAGTGTACCTCCACCAGCAGAGGGGATTATTGTGGAGGATGATGAGGAAAATAAGAAAGAAGAAAATATTGAGGTTAATAAGGAAAGTATAGATTTAACGTCAAAAGCAGAAACGAGAGTTGAGGAGGAAGAAGAAAATATTCCACTTGAACCATCCAAGAAAAATGCAGTAAGTGAAGTGAAAACTGTGGAAGAAGAGTTTGAAAGCGAACAAGCAGAGTTAAATGATGTACCTCCTGATGAATACGTAGATAGTGCTGGTGAAGAAGATTGTGCTCCAGAAGAGGAGAACATTGAATCAAAAGATTTTGTTGATTCCCCACATTCACACCATTCAGATTGGAAGACTGATTCAGAACTTAGTAAAGCATGTCAAACCCAAAATGCGCCTAGCAATTCGCCATTACCCCAGATCGAACCTCAAGAGCCAGTACCTGAGCATAGACGTAATTTTGTAGATATGGGCCAGACAGAATATTTCTATTTGAATCCCCAAAATAATCACTATCAAGAAAGCTTCCATACTCCAACTACAAGCAATGTATCAGTGGCCTACACAACACACAAGGAACCTGAAAGTTACGAACAATCGGAACCTATTTATACTTCTGCTAATATATTGCACGGAAATGATCACATGGATTTCGTCAATTTGGACGATATTGTTATCATAGGTGATTTTACGACAAATCCAGTGGCTTCACATGTGGAAAATTTCGAAAGTCCGATTAACGATAGACCCACGACTCTAATGACTATAGGGgaaatacatgaaccatcaaagGTTGACTATGCAAATCATCGAAAAGAGGATGATTACGAGCACCCCAAAATCGATTATGAACAACCTCCAAAAATCGATTATGAACACCACAAAATCGATTACACAGAACATACAAAAATCGATTATGACCACCCAATAAACGATTACGAACATTCAAAAATCGATTATGCAGAACATCGGGACTTGGAAGAAAGCATGTCTCGTGGAAGTTCTCATGTTAACATAAGATCAGACGAAAGAATGCCTGCAAGGGGTGAACTTTCTGGACAGGAGAGTTTGGGTGGTAGTAGTGATCTCACTTGGAATAGACTCCAATATCAAGAATGTAACTCAAGAATGTCTCATCATTATGAAATGATAGGAAGGGAGTCTTGGGATGCTTCTGATAGTGAAAGCTTTGATACGCCATCATTGAAAAGGCAAAACGTCACTCAGGTATCTTCTGAAGCAATCGATTATGATAATGATAATGATCTACCTACAATAATTAGTTACACAGGTCCACCTCTTAATTTTAAATGTTCTACATGTGGGGAAGATTTCGCAACTTCTAAAGAGAGGAAGGAACATGAATTGGAAAAACATCCAGAAAAATCTAAGAAAACCGTAATAGGAAGTGAAATAGGGAAAAAGACTGTCAGAAAATTAGTTATCAAAGCCAAAACAGTGAAGACTAAAAGTGAACCTAATTTTGATAACGTATTTACTAACAAATTAAAATTAGAGAATCCTGCCGAGTTGAAAAATGATGCAATAGTTGTAGAGGCTTCTGTTAAAATAGATGAACCCATAGAAATAACAGATATCAAAATAATATGCCCTCTGTGCGATTGCGTTTTGGATAGTGCAAAAAGTCTGAAGCAACACAGGTTAGAAGTCCACAgacaaaataaacaaactaaCGTAACTAAGCACAAATGCCTGACTTGTGGGGATATCTTCCAAAATGAATACAAATACACGGAACACTTGAAAATTCATCCTCTAGAGTGTAGACTTTGCGGGAAACTGTTCTACAGGAAGCAGAACATTAAGTTGCACATGAAGCGACATCTGGGGTTGAAGCCTTACAAATGTGACATTTGCGAAAAATCTTTTATTACAAGACAGAAACATGACGAACATAAGAATATTCATACAGGTGAGGCCCCTATAAATTGCAACTTCTGCGATGAGAAATTCAGGCGACATTCCAATCTAGTCCAGCACCGCAACCGGTACCACTTTATGTTGAAGAAGAAGGTTAAAGATTACATCTGTCAGTGTGGAGAAGTATTCCATTCCAAGAAAAAACTAGCTTGGCACAAGGAAATCCACGATTCCAAGCCGAAGGCGTGCACCCATTGCAGCGAAAAGTTCCTTCATATGTCGAGTTTGACTCGACACATGCGCAGAGCACACAACGACAAGTTCCTACCCGAAGAAACGCGACAGAACGAGAACGTCGAATGTCCGATTTGCAAAGGAATATATCTGAGGTCTTCCCTAGACGTTCACATAAAGAACCACAGCGGTACCAGGCCCTACACGTGCTTGATGTGCAATAAAGACTTTACCACTAAATGGAATCTCAAGTTACACAAGTGGACTCACGCCAACAGAAATTCGAAGCCCTTCAAGTGCGATCAGTGCAAGGGGGCCTTCATTCGAGAATCCGACTATACAGCTCACATGAATTCTCATAAGAGTGTCCGTCCGTACACTTGTAATTATTGCGGAGCGCAGTTCATTAGAAAATACAATTGTCTACGTCACGTCAAAGAACACGAGAATGATAAAACGTTTAATTGTAATGTGTGTGGTAAGTCTTTCCATCGGTCGTACTATCTCAAAGATCACATGCGGGTGCATAGCGGCGTTAGACCTTACACTTGTCATATATGCGGTAAAACTTCCACGACGAAGTCAAATCACAATAAACACGTACAAATACATCATGCACGAGAGCCGGTTAGTACTGAAAATTAG
Protein Sequence: MNLQISMLKRLQQIPRQQPTSGKDLKTEAYRFTWRLWQTHWSSLNTYLRAIQPSVYKPLYTGPTGLSRQDPDVIRYPAYLFNMPVPTYREPHYYRMSSVQCSAVVYLIDIVTPSVINPPTQEVAPTDSKFLRIVLQADITISNKTNANSSILNQSWNQPTPVQLGPPPNVSPVHGNHVFIYQQSMSTTSPQGNVLQVNPLSPQYLYHPSIYNPQMMPYVYQQQQVILSSNSLHPPQMRALPFELPSVPPPAEGIIVEDDEENKKEENIEVNKESIDLTSKAETRVEEEEENIPLEPSKKNAVSEVKTVEEEFESEQAELNDVPPDEYVDSAGEEDCAPEEENIESKDFVDSPHSHHSDWKTDSELSKACQTQNAPSNSPLPQIEPQEPVPEHRRNFVDMGQTEYFYLNPQNNHYQESFHTPTTSNVSVAYTTHKEPESYEQSEPIYTSANILHGNDHMDFVNLDDIVIIGDFTTNPVASHVENFESPINDRPTTLMTIGEIHEPSKVDYANHRKEDDYEHPKIDYEQPPKIDYEHHKIDYTEHTKIDYDHPINDYEHSKIDYAEHRDLEESMSRGSSHVNIRSDERMPARGELSGQESLGGSSDLTWNRLQYQECNSRMSHHYEMIGRESWDASDSESFDTPSLKRQNVTQVSSEAIDYDNDNDLPTIISYTGPPLNFKCSTCGEDFATSKERKEHELEKHPEKSKKTVIGSEIGKKTVRKLVIKAKTVKTKSEPNFDNVFTNKLKLENPAELKNDAIVVEASVKIDEPIEITDIKIICPLCDCVLDSAKSLKQHRLEVHRQNKQTNVTKHKCLTCGDIFQNEYKYTEHLKIHPLECRLCGKLFYRKQNIKLHMKRHLGLKPYKCDICEKSFITRQKHDEHKNIHTGEAPINCNFCDEKFRRHSNLVQHRNRYHFMLKKKVKDYICQCGEVFHSKKKLAWHKEIHDSKPKACTHCSEKFLHMSSLTRHMRRAHNDKFLPEETRQNENVECPICKGIYLRSSLDVHIKNHSGTRPYTCLMCNKDFTTKWNLKLHKWTHANRNSKPFKCDQCKGAFIRESDYTAHMNSHKSVRPYTCNYCGAQFIRKYNCLRHVKEHENDKTFNCNVCGKSFHRSYYLKDHMRVHSGVRPYTCHICGKTSTTKSNHNKHVQIHHAREPVSTEN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -