Basic Information

Insect: Diabrotica virgifera
Gene Symbol: Zbtb41
Assembly: GCA_003013835.2
Location: ML016604.1:274150-306947[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 9.7e-05 0.025 17.7 3.8 2 23 121 142 120 142 0.97

2 11 0.0004 0.1 15.7 4.3 1 23 147 169 147 169 0.99

3 11 9.2e-06 0.0024 20.9 1.5 1 23 175 197 175 197 0.99

4 11 1e-07 2.6e-05 27.1 1.1 1 23 203 225 203 225 0.99

5 11 0.0085 2.2 11.6 3.6 1 23 231 253 231 253 0.97

6 11 3.9e-08 1e-05 28.4 2.0 1 23 259 281 259 281 0.99

7 11 5.2e-06 0.0014 21.7 2.1 1 23 287 309 287 309 0.99

8 11 0.06 16 8.9 0.2 1 14 315 328 315 331 0.90

9 11 0.058 15 8.9 0.5 5 23 345 363 344 363 0.86

10 11 0.19 50 7.3 6.7 1 23 368 390 368 390 0.98

11 11 0.13 33 7.9 0.2 1 14 396 409 396 410 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	9.7e-05	0.025	17.7	3.8	2	23	121	142	120	142	0.97
2	11	0.0004	0.1	15.7	4.3	1	23	147	169	147	169	0.99
3	11	9.2e-06	0.0024	20.9	1.5	1	23	175	197	175	197	0.99
4	11	1e-07	2.6e-05	27.1	1.1	1	23	203	225	203	225	0.99
5	11	0.0085	2.2	11.6	3.6	1	23	231	253	231	253	0.97
6	11	3.9e-08	1e-05	28.4	2.0	1	23	259	281	259	281	0.99
7	11	5.2e-06	0.0014	21.7	2.1	1	23	287	309	287	309	0.99
8	11	0.06	16	8.9	0.2	1	14	315	328	315	331	0.90
9	11	0.058	15	8.9	0.5	5	23	345	363	344	363	0.86
10	11	0.19	50	7.3	6.7	1	23	368	390	368	390	0.98
11	11	0.13	33	7.9	0.2	1	14	396	409	396	410	0.92

Sequence Information

Coding Sequence: ATGGAAGTAAAACCAGAACAAGACAATTATTTTTCGGAAGAATgtaaaatcaaaatagaaaatcaGGAATTGCTGTATGTTGGATCTTCCTATTCTGTAAAAAGTGAAATAAAGGAAGAATTAGTTAAGACAGATTCGTTTATTGCTGATTCCAGTTCTTTTGTGGAAAACAACTTTAAAGCTGAACTAAAACATATTGAAAATGtgATGGAACCTAAACATGCAGTTAAGGAGGAATCTGACCAAAGTCACTCGGAGAGTCAACTATGTACATCAATTATCCTTGAAGACCTTAAGGATGAACCAAAAGGAGATGTTTCAGgtTATCAAGAGTCTAATAGTTTACACCTTGAAGAAAAAACATGTTCAATATGTTGCAAGCAGTTTTCTCGAAAAGATGATTTAGAAAGACATATTCAAACTcactctaaaaaaacttatcaATGCGAAATATGTTTCAAATGGTTTCATCGACGTAGTTATCTCAACTCTCATATAAGAAAGCACACTGAAGAGAAACTTTATCAATGTAAAATTTGTTCTAAGTCGTTTTCGCATGGGGGTGCTTTGAACATACATGTCAAAAAGCACAATGGAGAAAAACCATTTCAGTGTGAAGTTTGCTCCAAATCGTTTTTTCAATCAAGTGATCTTAAAATACACATGAGAATTCATACGGGAGAAAAACCTTATCAATGCGAAATTTGTTTGAATTATCATTCCCGAAGAGACGATTTGAAAAGACATATGAGAAAGCACACAGGCGAGAAACCTTATCAATGCGAAATTTGTTCAAAGTCATTTTCCCATGCAGGTACTTTGAAAGAACATATGAGGACACACTCCGGAGGAAAACCTTATCAATGTGAAGTTTGTTCCAAGCTGTTTTCACATACAAGTGCTTTGAAAGTACATATAAGAAAACACACTGGCGAAAAACCTTATCAATGCGAAATGTGTTTAAAGTCGTTTTCCCATGCAGGTTATCAAGAGTCAAATAATAGTTTGCACATTGAAGAAAATTCACGTCCAGTTTGTTGCAAGCAGTTTTCTCGAAAGAATGAGTTAAAAAGACATATTCCAACGCACTATAAAAAAACTCACCAATGCGAAATATGCTTTAAATGGTTTCATCGACGTAGTTATGTCAACTCTCATACAAGAAAGCACACTGGCGAGAAACCTTATCAATGCGATATTTGTTCAAATTCATTTTCCCGTGCAGATGGCCCCACTATGTGGAGCCTAGTCTCCCTCAAACCTCCACAACTGCCTCAGGACTCATGGAACCTCCGCAAAAGAAGCTCCCTGAGACTACCCCGACCAGTACTGAAAGGCACTCCAATCACACGTTCGTGTCCCACAGGCAGAGTGGATGAACCTTGTCTTGCTAGGGCGTTAGTCCGTTCGTTGCCTTCCACACCTGTGTGTCGCGGTACCCATACCAACCTAACCCTGTTGGTCAGAGCAACATCATCAAGTGCTCTCTTGCACTCAAGAACCAGCTTAGAGCTGATCTTGGGCGCTTCCAAAGCCCTTGGCGCTGCCTGGCTGTCAGAGCAAACCCTGTCTGTAATCTCTTGA
Protein Sequence: MEVKPEQDNYFSEECKIKIENQELLYVGSSYSVKSEIKEELVKTDSFIADSSSFVENNFKAELKHIENVMEPKHAVKEESDQSHSESQLCTSIILEDLKDEPKGDVSGYQESNSLHLEEKTCSICCKQFSRKDDLERHIQTHSKKTYQCEICFKWFHRRSYLNSHIRKHTEEKLYQCKICSKSFSHGGALNIHVKKHNGEKPFQCEVCSKSFFQSSDLKIHMRIHTGEKPYQCEICLNYHSRRDDLKRHMRKHTGEKPYQCEICSKSFSHAGTLKEHMRTHSGGKPYQCEVCSKLFSHTSALKVHIRKHTGEKPYQCEMCLKSFSHAGYQESNNSLHIEENSRPVCCKQFSRKNELKRHIPTHYKKTHQCEICFKWFHRRSYVNSHTRKHTGEKPYQCDICSNSFSRADGPTMWSLVSLKPPQLPQDSWNLRKRSSLRLPRPVLKGTPITRSCPTGRVDEPCLARALVRSLPSTPVCRGTHTNLTLLVRATSSSALLHSRTSLELILGASKALGAAWLSEQTLSVIS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -