Basic Information

Insect: Diabrotica virgifera
Gene Symbol: -
Assembly: GCA_003013835.2
Location: ML015185.1:435329-438394[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 34 4.9e-07 0.00013 24.9 0.9 2 23 52 73 51 73 0.98

2 34 0.018 4.7 10.5 3.2 1 23 76 98 76 98 0.98

3 34 7.7e-06 0.002 21.1 4.1 1 23 104 126 104 126 0.98

4 34 3.4e-06 0.00089 22.2 0.8 1 23 132 154 132 154 0.98

5 34 6.7e-06 0.0017 21.3 0.7 2 23 161 182 160 182 0.97

6 34 0.0049 1.3 12.3 3.5 1 23 187 209 187 209 0.97

7 34 2.3e-06 0.00059 22.8 2.8 1 23 223 245 223 245 0.98

8 34 1.1e-06 0.00029 23.8 0.6 1 23 251 273 251 273 0.98

9 34 0.0001 0.027 17.6 0.1 2 23 280 301 279 301 0.97

10 34 0.0029 0.75 13.0 2.7 1 23 306 328 306 328 0.98

11 34 2.5e-06 0.00066 22.7 2.9 1 23 342 364 342 364 0.98

12 34 1.3e-06 0.00033 23.6 1.0 1 23 370 392 370 392 0.98

13 34 1.3e-06 0.00033 23.6 1.0 1 23 398 420 398 420 0.98

14 34 1.3e-06 0.00033 23.6 1.0 1 23 426 448 426 448 0.98

15 34 1.3e-06 0.00033 23.6 1.0 1 23 454 476 454 476 0.98

16 34 1.3e-06 0.00033 23.6 1.0 1 23 482 504 482 504 0.98

17 34 1.3e-06 0.00033 23.6 1.0 1 23 510 532 510 532 0.98

18 34 1.3e-06 0.00033 23.6 1.0 1 23 538 560 538 560 0.98

19 34 1.3e-06 0.00033 23.6 1.0 1 23 566 588 566 588 0.98

20 34 1.3e-06 0.00033 23.6 1.0 1 23 594 616 594 616 0.98

21 34 1.3e-06 0.00033 23.6 1.0 1 23 622 644 622 644 0.98

22 34 1.3e-06 0.00033 23.6 1.0 1 23 650 672 650 672 0.98

23 34 1.3e-06 0.00033 23.6 1.0 1 23 678 700 678 700 0.98

24 34 1.3e-06 0.00033 23.6 1.0 1 23 706 728 706 728 0.98

25 34 1.1e-06 0.00029 23.8 0.6 1 23 734 756 734 756 0.98

26 34 6.7e-06 0.0017 21.3 0.7 2 23 763 784 762 784 0.97

27 34 0.00084 0.22 14.7 2.7 1 23 789 812 789 812 0.96

28 34 0.0059 1.5 12.1 5.5 1 23 826 848 826 848 0.98

29 34 7.3e-07 0.00019 24.3 0.7 1 23 854 876 854 876 0.99

30 34 1.6e-05 0.004 20.2 0.4 2 23 883 904 882 904 0.97

31 34 0.00052 0.13 15.4 2.8 1 23 909 931 909 931 0.98

32 34 0.0059 1.5 12.1 5.5 1 23 937 959 937 959 0.98

33 34 8.8e-06 0.0023 21.0 1.5 1 23 965 987 965 987 0.98

34 34 0.0099 2.6 11.4 0.4 2 23 994 1015 993 1015 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	34	4.9e-07	0.00013	24.9	0.9	2	23	52	73	51	73	0.98
2	34	0.018	4.7	10.5	3.2	1	23	76	98	76	98	0.98
3	34	7.7e-06	0.002	21.1	4.1	1	23	104	126	104	126	0.98
4	34	3.4e-06	0.00089	22.2	0.8	1	23	132	154	132	154	0.98
5	34	6.7e-06	0.0017	21.3	0.7	2	23	161	182	160	182	0.97
6	34	0.0049	1.3	12.3	3.5	1	23	187	209	187	209	0.97
7	34	2.3e-06	0.00059	22.8	2.8	1	23	223	245	223	245	0.98
8	34	1.1e-06	0.00029	23.8	0.6	1	23	251	273	251	273	0.98
9	34	0.0001	0.027	17.6	0.1	2	23	280	301	279	301	0.97
10	34	0.0029	0.75	13.0	2.7	1	23	306	328	306	328	0.98
11	34	2.5e-06	0.00066	22.7	2.9	1	23	342	364	342	364	0.98
12	34	1.3e-06	0.00033	23.6	1.0	1	23	370	392	370	392	0.98
13	34	1.3e-06	0.00033	23.6	1.0	1	23	398	420	398	420	0.98
14	34	1.3e-06	0.00033	23.6	1.0	1	23	426	448	426	448	0.98
15	34	1.3e-06	0.00033	23.6	1.0	1	23	454	476	454	476	0.98
16	34	1.3e-06	0.00033	23.6	1.0	1	23	482	504	482	504	0.98
17	34	1.3e-06	0.00033	23.6	1.0	1	23	510	532	510	532	0.98
18	34	1.3e-06	0.00033	23.6	1.0	1	23	538	560	538	560	0.98
19	34	1.3e-06	0.00033	23.6	1.0	1	23	566	588	566	588	0.98
20	34	1.3e-06	0.00033	23.6	1.0	1	23	594	616	594	616	0.98
21	34	1.3e-06	0.00033	23.6	1.0	1	23	622	644	622	644	0.98
22	34	1.3e-06	0.00033	23.6	1.0	1	23	650	672	650	672	0.98
23	34	1.3e-06	0.00033	23.6	1.0	1	23	678	700	678	700	0.98
24	34	1.3e-06	0.00033	23.6	1.0	1	23	706	728	706	728	0.98
25	34	1.1e-06	0.00029	23.8	0.6	1	23	734	756	734	756	0.98
26	34	6.7e-06	0.0017	21.3	0.7	2	23	763	784	762	784	0.97
27	34	0.00084	0.22	14.7	2.7	1	23	789	812	789	812	0.96
28	34	0.0059	1.5	12.1	5.5	1	23	826	848	826	848	0.98
29	34	7.3e-07	0.00019	24.3	0.7	1	23	854	876	854	876	0.99
30	34	1.6e-05	0.004	20.2	0.4	2	23	883	904	882	904	0.97
31	34	0.00052	0.13	15.4	2.8	1	23	909	931	909	931	0.98
32	34	0.0059	1.5	12.1	5.5	1	23	937	959	937	959	0.98
33	34	8.8e-06	0.0023	21.0	1.5	1	23	965	987	965	987	0.98
34	34	0.0099	2.6	11.4	0.4	2	23	994	1015	993	1015	0.97

Sequence Information

Coding Sequence: ATGAACAGAAACCAGAAAGTTGTCGACCAAGACAAAATGCAACAAGAAGTTAGAAAATAtgataaaataaacatacaaccTGATATTGTCAAAAATGAAAGTGAAACAAACAGAAGTAATGTTCTGAGGAAGACAAAAAGAACAGGAGATATTAAATGTCCTGTTTGCTTTAAAGTATTCAGCCGTAAGAGTTCCCTAGTAAACCATTTAAAAACACATAAAGATTTTGAATGCAAAATTTGTTCAAAaaagtttctaaaaaaatatCGCTTTGCGAGACATTTAAAGATTCACTTAGATCAAAGGAATTTTAAATGTTCTATATGTCAGAAGACGTTTATATTCAAGTATAGTCTTCAGCGTCACTTAAAATATCATTTAGATCAAAGGGATTTTAAATGTTATGTATGTCCGAAGGCATTTACAGCGAAGTCCGATCTTCAGCGTCACTTAAAACTACATTCAGGAGTTAAGGATGTATATTGTTCAATTTGTAATCGAGCATTTGCTTTTAAAGAAAGTCTTCAGCGACATTTGAAAACACACATTAAAAGGGAGTATAAATGTTCACTTTGTTCAAAAGTTTTTAGAGATAAATCATCTCACTCAATACATGTTAAGTCTCATTCTGACGAAAATGGTATTACTTATCCTGACGAAAATAGTTTTAAGTGTTCAATTTGTCCGAAGACCTTTGTAAGCAATCATGGTCTTCAGCGTCACTTGAAATATCATTTAGATCAAAGGGATTTTAAATGTTCTGTATGTCCAAAGGCATTTACAGCGAAGTCCGATCTTCAGCGTCACTTAAAACTACATTCAGGAGTTAAGGACGTTTATTGTGCAATTTGTAATCGAGCATTTGCGTTACAAAGCGGTCTTCAGCAACATTTGAAAACACACATTAAAAGGGAATATAAATGTTCACTTTGTCCAAAggtttttagagaaaaatcatctCACACAATACACGTTAAGTCTCATCCTGACGAAAATGGTTTTACTAATCCTGACAAAAATTGTTTTAAGTGTTCAATTTGTCCCAAGACATTTATATTCAAGTACAGTCTTCAGCGTCACTTAAAATATCATTTAGATCAAAGGGATTTTAAATGTTCTGTATGTCCGAAGGCATTTACAGCGAAGTCCGATCTTCAGCGTCACTTAAAATATCATTTAGATCAAAGGGATTTTAAATGTTCTGTATGTCCGAAGGCATTTACAGCGAAGTCCGATCTTCAGCGTCACTTAAAATATCATTTAGATCAAAGGGATTTTAAATGTTCTGTATGTCCGAAGGCATTTACAGCGAAGTCCGATCTTCAGCGTCACTTAAAATATCATTTAGATCAAAGGGATTTTAAATGTTCTGTATGTCCGAAGGCATTTACAGCGAAGTCCGATCTTCAGCGTCACTTAAAATATCATTTAGATCAAAGGGATTTTAAATGTTCTGTATGTCCGAAGGCATTTACAGCGAAGTCCGATCTTCAGCGTCACTTAAAATATCATTTAGATCAAAGGGATTTTAAATGTTCTGTATGTCCGAAGGCATTTACAGCGAAGTCCGATCTTCAGCGTCACTTAAAATATCATTTAGATCAAAGGGATTTTAAATGTTCTGTATGTCCGAAGGCATTTACAGCGAAGTCCGATCTTCAGCGTCACTTAAAATATCATTTAGATCAAAGGGATTTTAAATGTTCTGTATGTCCGAAGGCATTTACAGCGAAGTCCGATCTTCAGCGTCACTTAAAATATCATTTAGATCAAAGGGATTTTAAATGTTCTGTATGTCCGAAGGCATTTACAGCGAAGTCCGATCTTCAGCGTCACTTAAAATATCATTTAGATCAAAGGGATTTTAAATGTTCTGTATGTCCGAAGGCATTTACAGCGAAGTCCGATCTTCAGCGTCACTTAAAATATCATTTAGATCAAAGGGATTTTAAATGTTCTGTATGTCCGAAGGCATTTACAGCGAAGTCCGATCTTCAGCGTCACTTAAAATATCATTTAGATCAAAGGGATTTTAAATGTTCTGTATGTCCGAAGGCATTTACAGCGAAGTCCGATCTTCAGCGTCACTTAAAATATCATTTAGATCAAAGGGATTTTAAATGTTCTGTATGTCCGAAGGCATTTACAGCGAAGTCCGATCTTCAGCGTCACTTAAAATATCATTTAGATCAAAGGGATTTTAAATGTTCTGTATGTCCGAAGGCATTTACAGCGAAGTCCGATCTTCAGCGTCACTTAAAACTACATTCAGGAGTTAAGGACGTATATTGTTCAATTTGTAATCGAGCATTTGCTTTTAAAGAAAGTCTTCAGCGACATTTGAAAACACACATTAAAAGGGAGTATAAATGTTCGCTTTGTCCAAAGGTTTTTAAAGATAAATCATCTCACACAATACATGTCAAGTCGTCTCATTCTGACGAAAATGGTTTTACTCATGCTGACGAAAATGGTTTTAAGTGCTCGATTTGCCAGAAGACATTTATGTGCAAGTGGAGTCTTCAGCGTCACTTAAAATATCATTTGAATCAAAGGGATTTTAAATGTTCTGTATGTCCGAAGGCATTTACAGCGAAGTCCGATCTTGAGCGTCACTTAAAACGTCATTCAGGAGTTAAGGACAGTTATTGTGCAATTTGTAATAAAGCATTTGCGTTAAAAAGCGGTCTTCAGCGACATTTGAAAACACACATTAAAAGGAATTATAAATGTTCACTTTGTCCAAAGGTTTTTAAAGATAAATCATCTCACACAATACATGTCAAGTCTCATTCTGACGAAAATGGTTTTAAGTGCTCGATTTGCCAGAAGACATTTATGTGCAAGTGGAGTCTTCAGCGTCACTTAAAATATCATTTGAATCAAAGGGATTTTAAATGTTCTGTATGTCCGAAGGCATTTACAGCGAAGTCCGATCTTCAGCGTCATTTCAAATATCATTCAGGAGTTAAGGATATTTATTGTGCAATTTGTAATCGAGCATTTGCGTTTAAATTCATTCTTCAGCAACATTTAAAGACACACATGAAGAGGGAGTACCTATAA
Protein Sequence: MNRNQKVVDQDKMQQEVRKYDKINIQPDIVKNESETNRSNVLRKTKRTGDIKCPVCFKVFSRKSSLVNHLKTHKDFECKICSKKFLKKYRFARHLKIHLDQRNFKCSICQKTFIFKYSLQRHLKYHLDQRDFKCYVCPKAFTAKSDLQRHLKLHSGVKDVYCSICNRAFAFKESLQRHLKTHIKREYKCSLCSKVFRDKSSHSIHVKSHSDENGITYPDENSFKCSICPKTFVSNHGLQRHLKYHLDQRDFKCSVCPKAFTAKSDLQRHLKLHSGVKDVYCAICNRAFALQSGLQQHLKTHIKREYKCSLCPKVFREKSSHTIHVKSHPDENGFTNPDKNCFKCSICPKTFIFKYSLQRHLKYHLDQRDFKCSVCPKAFTAKSDLQRHLKYHLDQRDFKCSVCPKAFTAKSDLQRHLKYHLDQRDFKCSVCPKAFTAKSDLQRHLKYHLDQRDFKCSVCPKAFTAKSDLQRHLKYHLDQRDFKCSVCPKAFTAKSDLQRHLKYHLDQRDFKCSVCPKAFTAKSDLQRHLKYHLDQRDFKCSVCPKAFTAKSDLQRHLKYHLDQRDFKCSVCPKAFTAKSDLQRHLKYHLDQRDFKCSVCPKAFTAKSDLQRHLKYHLDQRDFKCSVCPKAFTAKSDLQRHLKYHLDQRDFKCSVCPKAFTAKSDLQRHLKYHLDQRDFKCSVCPKAFTAKSDLQRHLKYHLDQRDFKCSVCPKAFTAKSDLQRHLKYHLDQRDFKCSVCPKAFTAKSDLQRHLKLHSGVKDVYCSICNRAFAFKESLQRHLKTHIKREYKCSLCPKVFKDKSSHTIHVKSSHSDENGFTHADENGFKCSICQKTFMCKWSLQRHLKYHLNQRDFKCSVCPKAFTAKSDLERHLKRHSGVKDSYCAICNKAFALKSGLQRHLKTHIKRNYKCSLCPKVFKDKSSHTIHVKSHSDENGFKCSICQKTFMCKWSLQRHLKYHLNQRDFKCSVCPKAFTAKSDLQRHFKYHSGVKDIYCAICNRAFAFKFILQQHLKTHMKREYL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -