g100695.t1
Basic Information
- Insect
- Diabrotica virgifera
- Gene Symbol
- Csrnp1
- Assembly
- GCA_003013835.2
- Location
- ML022060.1:26024-38499[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.59 2.5e+04 -2.4 0.3 48 82 39 73 20 114 0.49 2 2 5.2e-75 2.2e-70 239.8 18.3 1 217 640 843 640 844 0.88
Sequence Information
- Coding Sequence
- ATGCAAACCATCTTTGACCAACCACCTGTTTCCAACCAAAACATAACCGATTCAGACAATTATAGTTCCTTCCAAATAGATTCAAATAATTATTGTTACCACCAAAATAGTACTGAAGAGTTAAAGCAACTACCTCGAAGTATAAACGATGAACAGATGAAATCAACTaccaaagaaataaaatttaGTGATGAAATTACAATTGCaagtaacaataataatgaatatACTGCCGTGAACAGTACTCTGTATACTGGAACGTTGACTGAAGTCCAAATAGATTCAAATAATTCTAGTCGCCACCAAAATAGTACTGGAGGGTTAAAAGAACTACCTTCAATTGCAAACGTCGAGCAGCTGAAATCGAATGTCACAGAAATAAAATTTAGTGATGAAATTACAATTGTAGGTAAAGATAATAATGAAGATTTTGTAGTGGAAAGCACTCCGCTTACTGAAACGTTGACTGAAGTCCAAATGGTTTCAAATAGTTCTAGTTTCCATCAAAATAGTACTGGAGAGTTAAAGGAACTACTTTCAATTGTAAACGCCGAAAAGCTGAAATCAAATatcaaagaaataaaatttattgatGAAATTACAATCGCAGGTAACATTAATAAGGAAGATTCTTTAGCGGAAAGCACACTGCTTACTGAAACGTTGACTGAAGTCCAAATAGATTCAAATAGTTCTAGTTGCCACCAAAATAGTACTGGAGGGTTAAAAGAACCACCTTCAATTGCAAACGTCGAACAGCTGAAATCAAATATCAAAGGAATAAAATTTAGTGATAAAATTACAATTGTAGGTAAAGATAATAATGAAGATTTTGCAGTGGAAAGTACTCTGCCTACTGAAACGTTGACTGAAGTACAAATGGTTTCAAATAGTTCTAGTTTCCATCAAAATAGTACTGGAGAGTTAAAGGAATTACATTCAATTAAAAACGTCGTACACCTGAAATCACATatcaaagaaataaaatttagTGATGAAATTACAATTGCAGGTAACATTAATAATGAAGATTCTGTCGCGGAAAGCACTCTGCGTACTGAAACGTTGACTGAAGTCCAAATAGGTTCAAATAGTTCTAGTTGCCACCAAAATAGTACTGGTGAGTTAAAGGAACTACTTTCAATTGTAAACGTCGAACAGCTGAAATCAAATatcaaagaaataaaatttattgatGAAATTACAATTGCAGGTAACATTAATAATGAAGATTCTGTAGCGGAAAGCACTCTGCTCACTGAAACGTTGACTGAAGTCCAAATAGGTTCAAATAGTTCTAGTTGCCACCAAAATAGTACTGAAGGGTTAAAGGAACTACCTTCAATTGCAAACGTCGAACAGCGAGCGTCGAACAAAATAACAATTAAACATAACATTAATAATGCAAATTCTGCAGTGAATGTGCCAGAAACAGAAACGGTAATTGAAGTCCCAATGGATTTAAAGGGTTCTATTTGTCACCAAAACAATACTGAAGGATTAAAGGAAATATCTCCAAGTACAAACGTCATACAGGTGAAACCAAATATCAAAGTAATATTAGGTGATGAAATAACAATTGCAGATAACGTTAATAATGAAGGTTCTACAATGAAGAGTTCATTGCCTACCGAAATTTTAATTGAAGAACTCCACAACAGATCAGACGGCCTTATTTCTGCATTAGGTTTAGAGTTAGATAAAGAACAACCGCAAGAAATAGTTGCGAATATAGAAAGGGACAGAAGTTCTTATTTTCTGGTTAATATACTAGCAGGTACACAATTCAAAGGATTTGATAGGTCAGTGGCTACTAGTGATGATAACAATAGCAAAATACAATATAAACGTAAACAGACAAAAAGCATTTTAAAGCGAAAGAATAGTGTGGAAGAAAACAAAGAACCACaagctaaaaaaagaaaaaaaggcaTTACTTTTGACAGTGTTACCATCTTCCAATTTCCCAGAGCGCAAGGTTTTACTTGCATTCCCACACAGGGTGGTTGCACCTTAGGCATGGAAGCTCACCATTCTGATAAAAAGACGTTCTCCGTAGCGGAACATGCCTTAGAAAAAAGAAACCGTAGAGAGGTCGTGCAAAAACATCGATCTCATAAACGTAATGGTACACGTGGAAAGAAAATATGTAACGAAAAAACGAACGTTAAGGATGCGCCATACGAAGGATCAGACAAAGACAATTCAGATGTATTACAACGACTCCATTTATCTCAGCGAAGAGCTTTGCTACGAGCTGCTGGCGTGACAAGGATAGATATGACAGAAAGTGATGAGTGTAGGAATATTCGAACATCTAGAATGTTATGTGGATGtggatgtaaagaaaattgtgATCCTGATACTTGTTCCTGTAGTCAGTCGGGAATCGAATGTCAAGTAGATGCAGATCATTTTCCATGTAAATGTTCCAGAGAGAACTGTAGGAACTTAAAAGGAAGAATCGAGTTTAGTAAAGATAGAGTTAGAATTCATTATACACGTACACTTATGAGGACAAATCTCAATAAACAAGAAGACTGGATGGCAAGATTGGATGGACAAGACCTAACACCCGTACTACAGCAGAACCAAAGTTTCGCGGGTTGTGTCATCGATAACTATTTTAACCCTTAG
- Protein Sequence
- MQTIFDQPPVSNQNITDSDNYSSFQIDSNNYCYHQNSTEELKQLPRSINDEQMKSTTKEIKFSDEITIASNNNNEYTAVNSTLYTGTLTEVQIDSNNSSRHQNSTGGLKELPSIANVEQLKSNVTEIKFSDEITIVGKDNNEDFVVESTPLTETLTEVQMVSNSSSFHQNSTGELKELLSIVNAEKLKSNIKEIKFIDEITIAGNINKEDSLAESTLLTETLTEVQIDSNSSSCHQNSTGGLKEPPSIANVEQLKSNIKGIKFSDKITIVGKDNNEDFAVESTLPTETLTEVQMVSNSSSFHQNSTGELKELHSIKNVVHLKSHIKEIKFSDEITIAGNINNEDSVAESTLRTETLTEVQIGSNSSSCHQNSTGELKELLSIVNVEQLKSNIKEIKFIDEITIAGNINNEDSVAESTLLTETLTEVQIGSNSSSCHQNSTEGLKELPSIANVEQRASNKITIKHNINNANSAVNVPETETVIEVPMDLKGSICHQNNTEGLKEISPSTNVIQVKPNIKVILGDEITIADNVNNEGSTMKSSLPTEILIEELHNRSDGLISALGLELDKEQPQEIVANIERDRSSYFLVNILAGTQFKGFDRSVATSDDNNSKIQYKRKQTKSILKRKNSVEENKEPQAKKRKKGITFDSVTIFQFPRAQGFTCIPTQGGCTLGMEAHHSDKKTFSVAEHALEKRNRREVVQKHRSHKRNGTRGKKICNEKTNVKDAPYEGSDKDNSDVLQRLHLSQRRALLRAAGVTRIDMTESDECRNIRTSRMLCGCGCKENCDPDTCSCSQSGIECQVDADHFPCKCSRENCRNLKGRIEFSKDRVRIHYTRTLMRTNLNKQEDWMARLDGQDLTPVLQQNQSFAGCVIDNYFNP*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -