g58546.t1
Basic Information
- Insect
- Diabrotica virgifera
- Gene Symbol
- CSRNP3
- Assembly
- GCA_003013835.2
- Location
- ML016343.1:209450-227624[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.81 3.4e+04 -2.8 0.6 73 99 64 80 27 113 0.49 2 3 0.35 1.5e+04 -1.6 0.1 45 82 147 183 132 192 0.52 3 3 1.2e-102 5.1e-98 330.1 8.2 1 218 190 398 189 398 0.92
Sequence Information
- Coding Sequence
- ATGTCCAACCAGAACGCCACCATTGAACCATCGAAAATCATCATCGACCAATCCGACCAAAACATCTCCAATTCAGACCAGTGCTGTTCCGCCTCCGACCAAACCGGTACCGAAGGTACCAGTAGTTCTAGTTGCCACCAAAGCGGTACTGAACATTTAAAGGAACTACCTTCAAGTACAAACGTTGAAGAGCTGAAATCAAATAAAAAAGCAATAGAATTTAGTGATGATACGACAGGTGTAGATAAGAACGAAGACGAAGACTCTGCAACGGAGAGTCTTCCGCCTACTGAGGAGTTAATCGAGGAACCCCACGATCGATCGGATGGTTCGGACTCTGGTTTAGGTTCAGAGCTGAGCGAAGAACGACCACAGGAAGTTGTGGCGAATATAGAAAGCGATAGCGAGTCTTCTTTTCTTTACAATACAATATCTAACACCCAGTTTGAGGAATTTGCTAGGCAAGTTGCTAATAACGACATGAGCGGCGTACAATCCAAGAGTAAACAGACAAAAAGTAGTCTTAAGCGAAAGCATGTTGCGGATGAAAACGATGAACCCAAAGCCAAAAAAAGAAAAGGTATCACTTTTGATAGTGTCACCGTCTTCTATTTCCCCAGAACGCAAGGTTTTACTTGCGTTCCTTCACAAGGCGGCTCTACCTTAGGCATGGGAGCTCACCATTCGCACGTAAAGAAGTTCTCCATAGCTGAGCACGCCTTAGAGCAAAGAAGGATCCATAGGCAACTCCTGCAGCAACTTCGCTCCGAAAGGAACGTTACCGGTGGCACAGCAACTTCCAGTGATGAATCCGACAGTGAAGATGAAGCCAGTGAGGGCTCAGATACCGAAATGGACCCCGACAACTTCTACTTCCTTCAGCCAGTTCCTACAAGGCAGCGAAGAGCTCTTCTCAGAGCTGCTGGAGTGAGGAAGATCGACTCGATAGAGAAGGACGAGTGCAGGAACATTAGGACGTCAAGGGAGTTCTGTGGGTGTGGTTGTAAGGGATATTGTGATCCGGACACTTGTTCCTGCAGTCAGGCGGGGATCAAATGTCAAGTAGATAGACTTAATTTTCCTTGTGGCTGTTCTAGAGACAATTGTGGGAACTCCAGTGGAAGGATCGAGTTCAACCCTGTCCGGGTTCGGACACATTTCATACATACACTTATGAGGCTAGAActagaaaaagaaaaggaaggCAAATCCGAAAACAAAGACACCCCAGTTCCCCAAAACTGGATGGACAACGAGAGGCTAACAGCCGTGCCCCACCAGGACCAATCTTCAGCGAAGTCTCCCATCAATAAGTATAATAGTAGTTTGTTACGAGACGTCAATCTTACCGCCAACGTGGAGGCCGAAAACTGCGTCCACACCGGAAGCTTCACCAATCTACACTACGGAGCTCCTGGAGAAGGGCCCGGGAATCATCTGCCGGACAGAGCTGATTCCCTGGACCTGTATACTTTCAGAGAAAATTGCTACAGCGAGGAGGGAAACCAAGAGGAACGCAAACAGCCGTTCCACGGCCAGGCGTTCCACTTCTCCGGCGTGGGATTCGGCAATTACGTCCCTGGCCACCAAAATCAATACCCTCAGCCCTACCAGCAGACCTTCAGCGAGTTTCCTCCGATGTTCACTCCCTACGGGGGCATGTACGTCCCGGAGTTCAGCCAGAAACCCCTAGATGGCGCCTTCCATCAAACCTACGAGAACTTCAATACGGATCACAACTTCCCCGAATCTAAGGAAAACCAATACACTAATCTCAATCCTGTTGCAAGCAATAGCAAGATAGAGTCGTTCTCTGAGTTGTTAAACGGGAGATATGGAGGCTATTCAAGTTACGAGGGAGAGTTCAGTAGTTTGAACTCGGAATGTTCGGCGAATAACTTGGAGAAGGGTAACGATAATTCGACCAGTACCAATGAAGAATGCGACGAAAACTTCGGCGAAATTATTAAGAAATCTATGGTAGAAACTGTCTCAGCATAA
- Protein Sequence
- MSNQNATIEPSKIIIDQSDQNISNSDQCCSASDQTGTEGTSSSSCHQSGTEHLKELPSSTNVEELKSNKKAIEFSDDTTGVDKNEDEDSATESLPPTEELIEEPHDRSDGSDSGLGSELSEERPQEVVANIESDSESSFLYNTISNTQFEEFARQVANNDMSGVQSKSKQTKSSLKRKHVADENDEPKAKKRKGITFDSVTVFYFPRTQGFTCVPSQGGSTLGMGAHHSHVKKFSIAEHALEQRRIHRQLLQQLRSERNVTGGTATSSDESDSEDEASEGSDTEMDPDNFYFLQPVPTRQRRALLRAAGVRKIDSIEKDECRNIRTSREFCGCGCKGYCDPDTCSCSQAGIKCQVDRLNFPCGCSRDNCGNSSGRIEFNPVRVRTHFIHTLMRLELEKEKEGKSENKDTPVPQNWMDNERLTAVPHQDQSSAKSPINKYNSSLLRDVNLTANVEAENCVHTGSFTNLHYGAPGEGPGNHLPDRADSLDLYTFRENCYSEEGNQEERKQPFHGQAFHFSGVGFGNYVPGHQNQYPQPYQQTFSEFPPMFTPYGGMYVPEFSQKPLDGAFHQTYENFNTDHNFPESKENQYTNLNPVASNSKIESFSELLNGRYGGYSSYEGEFSSLNSECSANNLEKGNDNSTSTNEECDENFGEIIKKSMVETVSA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -