g58546.t2
Basic Information
- Insect
- Diabrotica virgifera
- Gene Symbol
- CSRNP3
- Assembly
- GCA_003013835.2
- Location
- ML016343.1:209402-215170[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.3 1.2e+04 -1.4 0.4 60 60 79 79 18 146 0.61 2 3 0.28 1.2e+04 -1.3 0.2 45 82 163 199 151 208 0.51 3 3 7e-103 2.9e-98 330.9 8.2 1 218 206 414 206 414 0.92
Sequence Information
- Coding Sequence
- ATGGGATCTAACGTCTCCACAAAAACGGACAGTTCATCCTCATCAATCATGTCCAACCAGAACGCCACCATTGAACCATCGAAAATCATCATCGACCAATCCGACCAAAACATCTCCAATTCAGACCAGTGCTGTTCCGCCTCCGACCAAACCGGTACCGAAGGTACCAGTAGTTCTAGTTGCCACCAAAGCGGTACTGAACATTTAAAGGAACTACCTTCAAGTACAAACGTTGAAGAGCTGAAATCAAATAAAAAAGCAATAGAATTTAGTGATGATACGACAGGTGTAGATAAGAACGAAGACGAAGACTCTGCAACGGAGAGTCTTCCGCCTACTGAGGAGTTAATCGAGGAACCCCACGATCGATCGGATGGTTCGGACTCTGGTTTAGGTTCAGAGCTGAGCGAAGAACGACCACAGGAAGTTGTGGCGAATATAGAAAGCGATAGCGAGTCTTCTTTTCTTTACAATACAATATCTAACACCCAGTTTGAGGAATTTGCTAGGCAAGTTGCTAATAACGACATGAGCGGCGTACAATCCAAGAGTAAACAGACAAAAAGTAGTCTTAAGCGAAAGCATGTTGCGGATGAAAACGATGAACCCAAAGCCAAAAAAAGAAAAGGTATCACTTTTGATAGTGTCACCGTCTTCTATTTCCCCAGAACGCAAGGTTTTACTTGCGTTCCTTCACAAGGCGGCTCTACCTTAGGCATGGGAGCTCACCATTCGCACGTAAAGAAGTTCTCCATAGCTGAGCACGCCTTAGAGCAAAGAAGGATCCATAGGCAACTCCTGCAGCAACTTCGCTCCGAAAGGAACGTTACCGGTGGCACAGCAACTTCCAGTGATGAATCCGACAGTGAAGATGAAGCCAGTGAGGGCTCAGATACCGAAATGGACCCCGACAACTTCTACTTCCTTCAGCCAGTTCCTACAAGGCAGCGAAGAGCTCTTCTCAGAGCTGCTGGAGTGAGGAAGATCGACTCGATAGAGAAGGACGAGTGCAGGAACATTAGGACGTCAAGGGAGTTCTGTGGGTGTGGTTGTAAGGGATATTGTGATCCGGACACTTGTTCCTGCAGTCAGGCGGGGATCAAATGTCAAGTAGATAGACTTAATTTTCCTTGTGGCTGTTCTAGAGACAATTGTGGGAACTCCAGTGGAAGGATCGAGTTCAACCCTGTCCGGGTTCGGACACATTTCATACATACACTTATGAGGCTAGAActagaaaaagaaaaggaaggCAAATCCGAAAACAAAGACACCCCAGTTCCCCAAAACTGGATGGACAACGAGAGGCTAACAGCCGTGCCCCACCAGGACCAATCTTCAGCGAAGTCTCCCATCAATAAGTATAATAGTAGTTTGTTACGAGACGTCAATCTTACCGCCAACGTGGAGGCCGAAAACTGCGTCCACACCGGAAGCTTCACCAATCTACACTACGGAGCTCCTGGAGAAGGGCCCGGGAATCATCTGCCGGACAGAGCTGATTCCCTGGACCTGTATACTTTCAGGTAA
- Protein Sequence
- MGSNVSTKTDSSSSSIMSNQNATIEPSKIIIDQSDQNISNSDQCCSASDQTGTEGTSSSSCHQSGTEHLKELPSSTNVEELKSNKKAIEFSDDTTGVDKNEDEDSATESLPPTEELIEEPHDRSDGSDSGLGSELSEERPQEVVANIESDSESSFLYNTISNTQFEEFARQVANNDMSGVQSKSKQTKSSLKRKHVADENDEPKAKKRKGITFDSVTVFYFPRTQGFTCVPSQGGSTLGMGAHHSHVKKFSIAEHALEQRRIHRQLLQQLRSERNVTGGTATSSDESDSEDEASEGSDTEMDPDNFYFLQPVPTRQRRALLRAAGVRKIDSIEKDECRNIRTSREFCGCGCKGYCDPDTCSCSQAGIKCQVDRLNFPCGCSRDNCGNSSGRIEFNPVRVRTHFIHTLMRLELEKEKEGKSENKDTPVPQNWMDNERLTAVPHQDQSSAKSPINKYNSSLLRDVNLTANVEAENCVHTGSFTNLHYGAPGEGPGNHLPDRADSLDLYTFR*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -