g32060.t1
Basic Information
- Insect
- Diabrotica virgifera
- Gene Symbol
- SMARCC2
- Assembly
- GCA_003013835.2
- Location
- ML015415.1:36408-46734[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3 4.1e+04 -2.5 0.0 32 43 83 94 78 96 0.85 2 2 6.8e-15 5.3e-11 45.2 0.1 3 44 481 522 479 524 0.95
Sequence Information
- Coding Sequence
- atgAATGTCTCGAAACTGGAGCGAGTGTATGAAATGTTCCAAAGTATGGAAAAGGCGCTGATTACTGCAAAATTGTATTCTCTTCCTATCGTTTTTATAAAACCAGAACTGGATAAAGCAGTAGCTCAGAAAGTAAAAGAAATTATCCGCAAGCGCAATGGTCAAATTGTGGAAACTGAAGAGACCGCTACTCATATTATATATGGGCCGGTTGATCCACTCAAAGACGAATATGGAAGACCTGTCACGAAACGAGACAAAATGGTAATGATGCACTGGTATTACTTCCCGAATTCATTTGATACATGGGTAAATTTAGAAACAGCAGGCTTGGAAAATCTGACCGTGGAAAATAATCCTAGCCCGCATTCTGGTGCTTGGCGTATTTGTTCTACTTGGGTCTATGAAACTGACCAGTACAATGAATGGATGTCGGAGGAAGACTATGAAGTAGACGAAAATGGCGTAAAGAAAGTACATCCGAGGTTAATGTCTGTTGAAGATCTAATGAATCCTTCAGATGAACGCAGTAAGAAAAACAAAGGTAAAAGAAAACGGTCTCCTTCGCCTCCGTCTAAGATTGGCAAACGAAAAAGTGGTAGAAGCCCTGCTGTGGGCAAGAAAACTAGACCAGAGGATCCTGAATCTGAAGACTTAACAAAAGACATGGAGGAACCAACTCCAGAACCAAACATTGTGGAAGTTACGCCTTCTCCAACACCATCAACCAATCCACCTACAAAGAAAGACCACGAACTTCAACCCTTAAAAGGAGGTTCAATTACAGATATAGAAGAGAATGAGGAGAGAAATAATGAGGATTCCCAAACTGGCAAGAACAGTGACACCAACACACAAGACGATGGACAAGAAGATAATGTCACAGAGCAAACGCATCACATTATTATTCCATCGTATTCTGCGTGGTTCGACTATAACTCTATCCATGAAGTTGAAAAGCGTGCGATGCCGGAATTTTTTAACGGTAGAAACAAATCGAAAACTCCTGAGATATACTTAGCATACAGAAATTTCATGATCGATACCTACCGGCTTAACCCAACTGAATACATAACTAGTACAGCATGTAGACGCAACCTTGCAGGAGATGTTTGTGCCATAATGCGGGTTCATGCGTTTTTGGAGCAATGGGGTTTGATCAACTACCAAGTAGATACCGAATCCAGACCGACGGCCATGGGGCCTCCGCCTACTTCTCATTTTCATATTCTTTCAGATACCCCGTCTGGTCTACAGCCAGTTAACCCTCCTAAAACACCTCAACCTAGCGCAGCCAAAACTTTCCTTGATCTCGATAAGAGTGAGACTAAGATTAAGCCAGAACCCGCTACGGAAATGTCCAACTTTGGACTGAAGTTAGATCAGTATGTTAAGAAACCTgctgttttaagaaataaaagtGCTGCTTCTCTGACAAGAGACTGGACGGAACAGGAGACGCTGCTTCTCCTAGAAGGATTGGAAATGTATAAAGATGACTGGAATAAAGTGTGTGAACATGTTGGTTCTCGCACACAAGATGAATGCATACTTCATTTCCTTAGATTACCAATTGAAGATCCGTATTTAGAAGATCCAGAAGCTGGAGGTGCTTTAGGACCCTTAGCCTATCAACCAATCCCGTTTAGTAAAGCTGGAAACCCGATAATGTCAACCGTCGCCTTCTTAGCGTCTATTGTCGATCCGCGAGTAGCAGCAGCAGCTGCTAAATCAGCTATGAACGAGTTTGCTAGTATTAAAGATGAAGTGCCAGCGTCTGTGATGGACGCACATCTTAAAAATGTTGAAGCCTCTAATGCTGATGGTAAATTTGACCCAGCCGCAAACTTAGCTCTCACTGGTATAGCTGGAACCGTACCTGataaagaggaagaagataaAATTAAGAAAGAGGATAAGGATGACGAGAAATCTGGCGAAGACAAAAAGAATGGTGATAGTCAGGAAGACAAAGCTAGTGATAAGTTAAAATCGGAAGCATCGGATAGTGAAAAGGAAGAAAAAATGGATATATCGGACGGTAAAACAGACAAAGTTGTAAAAGATAGTGAAATGCAGAGTGCAGCAGCGGCTGCATTAGCTGCAGCTGCAGTTAAAGCGAAGCATTTAGCTGCTGTGGAGGAAAGGAAGATCAAATCTCTGGTAGCGCTGTTAGTAGAAACTCAAATGAAAAAGCTTGAAATTAAATTGCGGCATTTTGAAGAACTAGAAACAACCATGGAGAGGGAACGCGAAGGGCTTGAGTATCAGAGACAACAACTTATAACAGAAAGACAGCAATTCCATTTGGAACAATTAAAAGCAGCAGAGTTTAGAGCTAGACAGCAAGCACATCAAAGACTACAAGCTGAACAAGGCCAGTGGGCTGCGCAGCAAGTACCCGCTTCCCACTCAACTCCTCCTGCCGAGTCTGGACCAAGTACAACCCCCACTCCCCCATCCCCACAAGCTTCGGCTGTAGCCTCCCCCCAAGCCCCTCACCACCACATTTGA
- Protein Sequence
- MNVSKLERVYEMFQSMEKALITAKLYSLPIVFIKPELDKAVAQKVKEIIRKRNGQIVETEETATHIIYGPVDPLKDEYGRPVTKRDKMVMMHWYYFPNSFDTWVNLETAGLENLTVENNPSPHSGAWRICSTWVYETDQYNEWMSEEDYEVDENGVKKVHPRLMSVEDLMNPSDERSKKNKGKRKRSPSPPSKIGKRKSGRSPAVGKKTRPEDPESEDLTKDMEEPTPEPNIVEVTPSPTPSTNPPTKKDHELQPLKGGSITDIEENEERNNEDSQTGKNSDTNTQDDGQEDNVTEQTHHIIIPSYSAWFDYNSIHEVEKRAMPEFFNGRNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTESRPTAMGPPPTSHFHILSDTPSGLQPVNPPKTPQPSAAKTFLDLDKSETKIKPEPATEMSNFGLKLDQYVKKPAVLRNKSAASLTRDWTEQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDPEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASIVDPRVAAAAAKSAMNEFASIKDEVPASVMDAHLKNVEASNADGKFDPAANLALTGIAGTVPDKEEEDKIKKEDKDDEKSGEDKKNGDSQEDKASDKLKSEASDSEKEEKMDISDGKTDKVVKDSEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLQAEQGQWAAQQVPASHSTPPAESGPSTTPTPPSPQASAVASPQAPHHHI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00721974;
- 90% Identity
- iTF_00025982;
- 80% Identity
- iTF_00436848;