g59308.t1
Basic Information
- Insect
- Diabrotica virgifera
- Gene Symbol
- -
- Assembly
- GCA_003013835.2
- Location
- ML016381.1:266345-307751[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.0061 48 6.9 0.1 23 44 71 92 63 94 0.89 2 3 3e-06 0.023 17.5 0.0 2 45 102 145 101 146 0.95 3 3 1.2e-07 0.00096 21.9 0.3 1 43 152 194 152 197 0.94
Sequence Information
- Coding Sequence
- ATGTCTTCCTTTGATTCCGTAAGTAGTGAGGACGAAAATACTGAATTAGTCAGCCAGAGAACAATTAAGAAAGGAGACTTTATAATTGGTCAGTTTTTAATGGGTAAGAGGGGTGCAACTGTATACCGGTACTTATGCGTAGTACAACAAAAAGAGCCTGAACCAGGAGAGTTTGTTTTCCAAGGCTTAAGagTAGGTGATTACATACCATGGACAAAAATTGCCAGACACTTTAGATACAGGGAAAGATCACAATTACATCATaggtttaaatattttttgaaccATGTTGATAAGAAACAAGGAAAGTTTTCATTGGCCGAAGATTGCTTAATTTACATATGCGTAGAAAAATTTGGAATGGCCTATCATGAAGTTACAGAACATTTGAAGGATAGATCTCGTACCCAAATACGAACTAGATATATAACTTGCTTGAAATTAGATGCCAAAAAGAATACATGGACGGAAGCTGAGGACGATACTTTGATACGCCTAAGAGAACAACAGACTAAAATGGATTGGACAACTATTGCACAAACGTTAAGAAGAACCCCGGGTCAGACGCGTCAACGTTATcacgtaataaaaaaatatttagagaAGAACTCAGGAAGCACCATTATGAATGTACCAAGAAGAATTCACGTTAAGGAAGAAAATAATTCAGTACTTAAGCAAGTGGCGAATATTTTTGGAGCACAAAATGTGATACCTACGTTAGAAGAAATAGGAGAAATATtaagtaattatttaaatgaacCCCTGTCTAGCCAAAATGACAGCGTTGAAGATATTGATGTTTTATTATACGATTTCTTTTTGAGTACCTCCGATCAATCTCTTGAAATTTTATCAGATCCACTTGCAGTCAAACGGGTTGTAGATTATGTAGAAtatctaatgaattttcttaAGGTAGACGTGGACATTCCTAAAAATTTGGCGAAATGTCCACATATAGATAGTCTCGACAAGAAATTATTGTCAGAAATAAGAACTAGAAAACGCAAAAAACCTGTTGTGTTCTCTTCGAATCCCATTAAAGATTGCATTGCACCAAATTTCTACACGACAAACGGCATGAGAGCTTTACTGGAAAGAAATTTTAAATTCCGATCTGATCCAGTTGGAAAGATTTTTGGTAATTATTTGGATGAACCTGACATCTCATTACAGAAATTCAAGTGTGAAATAAATAATGATGATTCGGAAAGTACCATTTTGTTTAAAGAAACGATAGAAATGGATAGAAAACTCTTTTTTAGTAGATTTGTAACATTATTTGATTGGCCAGGTATTATATCATTAGAGTCTCCTCATAAGGATTTAGTAAGCATTTGCAAACCATTGACTGTAGATTATTCCCGAAAAAGTACACCTACCAACGTTACAAAGACTTACAGCAGAAAAAGAGGTAGTCAAGCAACAACGGACACAAGTCAGGAGCAGCAATCTAACAAAGTAATAATTGTAGAGGAAGATGGTTCTGAATCGCGTCATTCTAAAAAgtcattttcaaataaaacatATGGGACGGCTCAAAAGATATTAACCAAGAAAATGGATTTGAACATTTTCACATCAGTACAAATGGATGAAAGTAAACCTTGTTCCAGCACAATGGCTGGCATAATTAAAGATTGGTACTCGGATGATAGTGATCATGAATCTTACAATGCCAAAGAATCCACATCAGCGGAAAATCTGTGTGATGTTTAG
- Protein Sequence
- MSSFDSVSSEDENTELVSQRTIKKGDFIIGQFLMGKRGATVYRYLCVVQQKEPEPGEFVFQGLRVGDYIPWTKIARHFRYRERSQLHHRFKYFLNHVDKKQGKFSLAEDCLIYICVEKFGMAYHEVTEHLKDRSRTQIRTRYITCLKLDAKKNTWTEAEDDTLIRLREQQTKMDWTTIAQTLRRTPGQTRQRYHVIKKYLEKNSGSTIMNVPRRIHVKEENNSVLKQVANIFGAQNVIPTLEEIGEILSNYLNEPLSSQNDSVEDIDVLLYDFFLSTSDQSLEILSDPLAVKRVVDYVEYLMNFLKVDVDIPKNLAKCPHIDSLDKKLLSEIRTRKRKKPVVFSSNPIKDCIAPNFYTTNGMRALLERNFKFRSDPVGKIFGNYLDEPDISLQKFKCEINNDDSESTILFKETIEMDRKLFFSRFVTLFDWPGIISLESPHKDLVSICKPLTVDYSRKSTPTNVTKTYSRKRGSQATTDTSQEQQSNKVIIVEEDGSESRHSKKSFSNKTYGTAQKILTKKMDLNIFTSVQMDESKPCSSTMAGIIKDWYSDDSDHESYNAKESTSAENLCDV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -