g44103.t1
Basic Information
- Insect
- Diabrotica virgifera
- Gene Symbol
- Smarcc2
- Assembly
- GCA_003013835.2
- Location
- ML015751.1:7490-9226[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-15 9e-12 47.6 0.0 2 44 292 334 291 336 0.96
Sequence Information
- Coding Sequence
- atggaaAAACTACAAAGGAAACGCTCTGCATCCCATCAACCCCACACAAGAAAGATTTGCAGAAATCTTTCTATTGCTAAAAAGAGAAGAATAAAGTATTCCCAAAATAATGACTTAGTATTAATAGATCATGTTAATGAAGATATAAATGTTCCTTCTGTGTCAAAAATTGTTGAAATTGTTCCCTTAGAACAAAATGACCAACCCAATAAGGAAATCACTACACTTCAACCATTACAAAGTAGTTTAGAAGAAAATGAAATGAAAGATTTGAACATTGCTGACAATAGCGAAACCAAAACACAAGATTATGAACAAGACAGAATTGTCATAGACCAAGAACATCATATTATTATTCCTTCTTATTCGTCATGGTTTGATTACCATACCATTCATGCTGTTGAAAAGCGGGCAGTatcagaatttttcaatggtAAAAACAAATCTAAGACACCAGAGATATATTTAGCATATAGAAATTTCATAATAGATACATATCGCCTCAATCCAACAGAATATATAACTAGTACTGCTTGCAGAAGAAACCTTGCAGGGGATGTTTGTGCCATAATGAGAGTTCATGCTTTTCTTGAACAATGGGGATTGATCAACTACCAAGTAGATACTGAATCCAAGCCAACACCCATGGGTCCCCCATCTACTACTCATTTTCATATTCTGACTGATACTCCAAGAGATCTTAAATCTATTAATACTCCATGGGTTAACAGAACAAAAAATTTAATGGATCTTGATAAAACCAAAGTTAGGAAACCAAAACCTGCTGCTAAGATGGGCAACTTTGGATTAAAATCAGATCAGTATGCTAAACAATCTAAGTCTTTCAGTCAGAAGGGTATAACATCTGTACTAGGAGATTGGACAGATCAGGAGACTCTTCTTCTTCTGGAAGGATTGGAAATGTATAAAAATGATTGGAATAAAGTTAGTGATCATGTAGGTTCTCGCACTCAAAGTGAATGCATTCTTCATTTTCTTAGACTGCCAATTGAAGATCCTTATTTAGAGGGACCAGATAATGGAAGTGCTTTAGAACCTTTAACTTGTGAACCCATTCCATTTAGTGATATGGGAAGTCCAATTATGTCAACTGTAGCATTTTTAGCTTCTACTGTAGATCCTAAGGTAGCAGCAGCAGCTGTTAAATCAGCTATGCACGAATTTTCTACTATTCAAGATGCAGTAATTACAGATACAAATGTGAAAACTTCTAGTGGTAATTATGGGGAAGCATCTAATTTAAAGGCAAATGGTGAAGCTGACACTATACTAAGTGATGATTATGAAGGTGACAATCAAAAAAATGAGGCAGATGGAAAATCTGGTGAAGAGCAAAACCATTCAAATACAGTTAAAGAAGATGAAAAAATGCACATGTATACCAAAAATAATGAGTTTACAAAACATAGTGAAATACAGAGTGCAGCAGCTGCTGTATTAGCTACTGGAGCAGTTAAAGCTAAACATTTAGCTGCAATAGAGGAAAGACGGATAAAATTTTTTATAGCTGCACTTCTAGAAACTCAAATGAAAAAGCTTGAAATCAAATTAAGATGCTTTGAAGAACTAAACAGAACTATGGAAACAGAAATAGGAAGGCTTGAATACCAAAGGCAACAACTTATCATAGAAAGACAAGAGTTAAACATGGAAAAACTAAAAGCTGCTCAAATAATACGCAATCAAAATCAAAACACAGGATATACTACAATTTGA
- Protein Sequence
- MEKLQRKRSASHQPHTRKICRNLSIAKKRRIKYSQNNDLVLIDHVNEDINVPSVSKIVEIVPLEQNDQPNKEITTLQPLQSSLEENEMKDLNIADNSETKTQDYEQDRIVIDQEHHIIIPSYSSWFDYHTIHAVEKRAVSEFFNGKNKSKTPEIYLAYRNFIIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTESKPTPMGPPSTTHFHILTDTPRDLKSINTPWVNRTKNLMDLDKTKVRKPKPAAKMGNFGLKSDQYAKQSKSFSQKGITSVLGDWTDQETLLLLEGLEMYKNDWNKVSDHVGSRTQSECILHFLRLPIEDPYLEGPDNGSALEPLTCEPIPFSDMGSPIMSTVAFLASTVDPKVAAAAVKSAMHEFSTIQDAVITDTNVKTSSGNYGEASNLKANGEADTILSDDYEGDNQKNEADGKSGEEQNHSNTVKEDEKMHMYTKNNEFTKHSEIQSAAAAVLATGAVKAKHLAAIEERRIKFFIAALLETQMKKLEIKLRCFEELNRTMETEIGRLEYQRQQLIIERQELNMEKLKAAQIIRNQNQNTGYTTI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -