g93538.t1
Basic Information
- Insect
- Diabrotica virgifera
- Gene Symbol
- clz9
- Assembly
- GCA_003013835.2
- Location
- ML020098.1:1646-3646[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8e-07 0.00019 23.8 0.0 7 39 35 66 30 72 0.86
Sequence Information
- Coding Sequence
- ATGGCATGGAGTAAAAAGAAGATTGAAatcaagaaaaaaaataataatgtacgaCAACGACCAAAACGAACATTTTTTCAATACGAACCTCAGCAAGTAAAGAATGCATTGGAAGCTATTCGAGGTGGAATGAAAGTAAGTACAGCATGTAATTTGTATGAAGTACCCCGTTCCACAATACGCAATAAGTTAAGTGGAAGAGCTCCAGAAACATCAGGCAAAGTCGGAAGAAGTCCAGTTTTAGGGAAGATCATAGAAGATCGGCTGGTACACTGGATCAAAACTACAGCTAAAATGGGTTTTCCTATTTGTCGAGAAGgcctttatttttcaataaaaaaattggtagAAGACAGTCAACTAAAAACCCCTTTTAAAGCAAATACTCCTGGGAGGAAGTGGTTTCATTTATTTATGCGTAGATTTCCAGAACTCTCATTAAAGCAGTCTGAATACATAAATAGAGCCAGATCATTAATTACTGAAGAAAAAATCCGAAACTGGTTCAAAGAAACTTTGGATTTACTTGGAGATGATAAGCATGTTTTGGATGATCCGGCAAGAATCTGGAATATGGATGAGACGTCTTTCTATTTATGTCCAAAAGGCGGTTTAATTTTAGCGGAGAAAGGTCTTCCAGTTTACAATACTTCATTCTCCTCGGACAAAGAAAATATAACCACTTTAATAACAGCAAATGCTTTAGGGAAAATGGCACCACcccttacactttttaaatatgaTCGGCTTCCTGAGAAGATCTgcaaaaatattccaagagactggGGAGTTGGAAAATCACCCAAAGGATGGATGACATCAAAGTGTTTTTACGAATACTTTTCAAATGTGTTTATTCCTTTTATTCACGAAAGTAATATTGCGTTGCCGATTATAGTTTTTTTGGACGGACATTCCTCGTATTTAAGTTTGCCTTTATGTCGATTGTGCATTGAGAATAAAATTATAGTTGTGTGTTTACATCCAAATACGACACACATCCTTCAGCCGTTGGATGTCAGTTTCTTTTTTCCGTTAAAAAGTAAGTGGAAAACTGAAGTAAAAATGTACAGATTTCACAACGGCAGAGATGTCAAAAAACATGACATTCCACAACTCCTTCAAAAAACTATGGATGAAACTGATTTTATTAAATCTCTACAAAATGGGTTTAAAACATGTGGGCTTTTTCCGTTTTCTGCTAATAACGTAGATTATTCTAAAATCACATTAAGGAAAGAACCCATAGTAGTCTCTAGCAAAACGAAAACTTGTCTGAtacatttaaaatatttggagtctAAAATTCATCCCGACGTTTTAAAACAATTCAAACAGTCCAAATACGATGCTTTTGATGAATCATTGTACAATATATGGGTACAGTTTAAAAACGAAGAAGATTTATTACATGACCCTATTGAGAGTGTCAGCAAATTGTCGGCTGAGGAAATTCCTAACCATTATATGGTAGACAATTCCATTGTAATTGAAGTGGAAGATAATAATGTACTAACATCAACTCCAACAGTCTCTAATATTGTAGAATTTGACTTTCCAGAGTATAATAATCCTTCCTTTAAAGAAAGCAGTTTCATAGACAATGCTACAGAAATGTTAATAGATAAAGAGTTAGCAAAAAATTCTGATGTGGTTATGGACAATGAATCGATGGATCTATTGGAAAATAGCAGTGTTATTAATAAATTGACGGACTCGCCTATACCTTCAAATGTTGACTTAATGACTTCATCTGTTGGTACTACCATTGTCTATACTCCGAAAAGAAGGCCTGTAGACCTATTAAGTAACATTCTAATTTATCCCAGTGACGAAAAAATTTTCAAGAAAACCAGAAAGCGTGAAATCTTACCTTCTGTGCTAACATGTATTACATGGTTGGAACTTGCGGTGGCTAAAGAAAAAGAACTTGAAatggaaaaaaaagaaaaaagaagcaagacaaaGAGGCGAAAAGAGCCTGTAAAGAAGAGAATCTAA
- Protein Sequence
- MAWSKKKIEIKKKNNNVRQRPKRTFFQYEPQQVKNALEAIRGGMKVSTACNLYEVPRSTIRNKLSGRAPETSGKVGRSPVLGKIIEDRLVHWIKTTAKMGFPICREGLYFSIKKLVEDSQLKTPFKANTPGRKWFHLFMRRFPELSLKQSEYINRARSLITEEKIRNWFKETLDLLGDDKHVLDDPARIWNMDETSFYLCPKGGLILAEKGLPVYNTSFSSDKENITTLITANALGKMAPPLTLFKYDRLPEKICKNIPRDWGVGKSPKGWMTSKCFYEYFSNVFIPFIHESNIALPIIVFLDGHSSYLSLPLCRLCIENKIIVVCLHPNTTHILQPLDVSFFFPLKSKWKTEVKMYRFHNGRDVKKHDIPQLLQKTMDETDFIKSLQNGFKTCGLFPFSANNVDYSKITLRKEPIVVSSKTKTCLIHLKYLESKIHPDVLKQFKQSKYDAFDESLYNIWVQFKNEEDLLHDPIESVSKLSAEEIPNHYMVDNSIVIEVEDNNVLTSTPTVSNIVEFDFPEYNNPSFKESSFIDNATEMLIDKELAKNSDVVMDNESMDLLENSSVINKLTDSPIPSNVDLMTSSVGTTIVYTPKRRPVDLLSNILIYPSDEKIFKKTRKREILPSVLTCITWLELAVAKEKELEMEKKEKRSKTKRRKEPVKKRI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00436841;
- 90% Identity
- iTF_00436841;
- 80% Identity
- iTF_00436837;