g31327.t1
Basic Information
- Insect
- Diabrotica virgifera
- Gene Symbol
- -
- Assembly
- GCA_003013835.2
- Location
- ML015398.1:328919-329266[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-09 8.6e-07 31.3 0.0 2 38 19 56 18 62 0.85
Sequence Information
- Coding Sequence
- ATGGGAAGAACGTACAAAAGACAATTAGGCACTAGAACGTATGGCAATTTTAATGAAGAACAAGTTAATCAGGCGCTGCACGATGTATTGGAAAATGGATTATCGCTAAGAAAAGCcgcaaaaaaattcaaattgtcCTACGGAACTTTAAATAACAAGTACCATGGAAGGAAGATTAAGAAAACAGGTGGACAATCTGTATTCACATATGAAGAAGAAGTAGCCATTATAAATAGCATTTTAACGTGTGCAGATTGGGGATATCCTCTAAGTGCAATGGATTTGAGAATGTTCGTCAAAAGTTTTTTGGCCTTAAATCAGCAGGATCGAGGaagattttcaaaataa
- Protein Sequence
- MGRTYKRQLGTRTYGNFNEEQVNQALHDVLENGLSLRKAAKKFKLSYGTLNNKYHGRKIKKTGGQSVFTYEEEVAIINSILTCADWGYPLSAMDLRMFVKSFLALNQQDRGRFSK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00436686;
- 90% Identity
- iTF_00436770; iTF_00436615; iTF_00436666; iTF_00436667; iTF_00436637; iTF_00436555; iTF_00436710; iTF_00436621; iTF_00436662;
- 80% Identity
- -