Basic Information

Insect: Diabrotica virgifera
Gene Symbol: TIGD6
Assembly: GCA_003013835.2
Location: ML015749.1:57009-58784[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.9e-15 1.6e-12 49.6 0.0 2 39 16 53 15 58 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.9e-15	1.6e-12	49.6	0.0	2	39	16	53	15	58	0.88

Sequence Information

Coding Sequence: ATGCCGCGGAATTATAAAAGAGTCACCGAAAAAGCTTCGTGGAGAGAGGAGGAGTTGCAAGGAGCACTCCGTGCTATACAGAATGGTATGTCGTTAAGAAAAGCtgcaataaaattttcaattccAAAATCTACGTTACACGAACGACTTAAAAATGGCACTGCCCCTTCTGGACCTTCCTTGGGCCGAAAGCCAGTTTTTTCAGTTGAAGCCGAAAATGCACTTGCTGTTCAAATTAAGAAGCTGGCAAAAGTTTTTTATGGAATAACTCCCCAGGAAGTACGAAGATGTGCTTTTGGATTTGCACAATCAAACAACATCCGAGTCCCCTTTAATCAAGAAAGAAAAATGGCTGGTAAAGACTGGGAAAGGGGCTTCATATCTCGTCACAATATTACGTTAAGGAAACCAGAAGCAACCAGCATTAACAGAATTACAGCTTTTAGTCGCAATGAAGttaccattttttttaacaatttatcCAGACTTatggaaaaatatgcattttcacccaataaaatttataattgcgATGAAACTGGGGTCACTACTGTACAACGCCCACCAAAAATATATGCAGAAAAAGGTCAGAAGCGATTTGGATTTGTTACAAGCTGGGAAAGGGGGAAAACAACCACAGCGATGTGTGCCGTCAACGCTACAGGAACCTATATACCTCCCATGTTTATATTTGCACGCCAAAGAATGGCGTCCCATCTTCAACGAAACGGTCCCCCAGGTGCCCTTTACACATGCTCAAAAAATGGGTGGATTACAGAGGACATATTTCTTACTTGGTTACAACATTTTCAAGCATTTGTAAAAGCATCCAAAGAAGATCCAGTTCTTTTAATCATGGACAATCATAGCACTCACTGCACGTTACAAGCATATAATTTTTGTAGAGATAACGGTATTGCTGTTCTGACAATCCCTCCACATTCATCACATCGCCTTCAGCCACTCGATGTGAGCTTTTACTTTCCTCTAAAGACCGCATTCAACTCTGAATGTTCCAAATATTTGACCAGCCATCCAGGGGAGAAAATCACGCCTAGTGAGATTGCTGAATTATTTAATTTAGCATTTAGTAGAGTGGCAACCCCGGAAAAGGCTATCAAGGGATTTAAAGAGACAGGTATTTTCCCCTACAACCCTGACGTATTCACAGATGAAGATTTTGCTCCTGCAGAAGCCTTTCAATCCACTGTTTCTGATGCACTTCAAGAACCTACCCAATCAGAAAAACTACTCAAAACAAATGAGACTACCCCTGAAAAAAATAGTAGTGTGAATGAGACAGAATTAAAAAATGTTTCCTTTGCCGAGATAATTCCTCTACCATCTTGTTCTCACGAAAATGTTGTAAAGAGACAAAATAAGGCAAACCAGCAACACTCTATTGTATTTACGTCAACACCGCTAAAAGAAGAGctagaaaaaaaagaagagaagaaaaataaaaagacaACAATCAAATCAGATAAGGCTAAAAGAAATGTATTTATGACACAGGAGGGGTCTACATTAAGACAAAAATCAAAGCGAACAAAAATTGCCTTAAACTATAAAatatgtgaagaaggagaaagtGAGATAGAGGATGATGACGATGTTAGGGACAAGAACATTACCGAAGACATTTGCATTTTGTGTGGAGAATTTGGCAAGAACAGTGAACTTTGGCTAAGATGTGTGTATTGTGGTCATTGGGCACACAAGGCATGTTCTAACTCTCCaaaagacaaaaaatttatttgcgACTTTTGTTTGTAA
Protein Sequence: MPRNYKRVTEKASWREEELQGALRAIQNGMSLRKAAIKFSIPKSTLHERLKNGTAPSGPSLGRKPVFSVEAENALAVQIKKLAKVFYGITPQEVRRCAFGFAQSNNIRVPFNQERKMAGKDWERGFISRHNITLRKPEATSINRITAFSRNEVTIFFNNLSRLMEKYAFSPNKIYNCDETGVTTVQRPPKIYAEKGQKRFGFVTSWERGKTTTAMCAVNATGTYIPPMFIFARQRMASHLQRNGPPGALYTCSKNGWITEDIFLTWLQHFQAFVKASKEDPVLLIMDNHSTHCTLQAYNFCRDNGIAVLTIPPHSSHRLQPLDVSFYFPLKTAFNSECSKYLTSHPGEKITPSEIAELFNLAFSRVATPEKAIKGFKETGIFPYNPDVFTDEDFAPAEAFQSTVSDALQEPTQSEKLLKTNETTPEKNSSVNETELKNVSFAEIIPLPSCSHENVVKRQNKANQQHSIVFTSTPLKEELEKKEEKKNKKTTIKSDKAKRNVFMTQEGSTLRQKSKRTKIALNYKICEEGESEIEDDDDVRDKNITEDICILCGEFGKNSELWLRCVYCGHWAHKACSNSPKDKKFICDFCL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00436402;
90% Identity: iTF_00436402;
80% Identity: iTF_00436403;