g91464.t1
Basic Information
- Insect
- Diabrotica virgifera
- Gene Symbol
- -
- Assembly
- GCA_003013835.2
- Location
- ML019681.1:95001-97077[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-11 8e-09 37.8 0.0 1 38 14 50 14 52 0.95 2 2 1.3e-07 3.1e-05 26.3 0.1 8 39 53 83 51 88 0.88
Sequence Information
- Coding Sequence
- ATGGGTCGTATTCGCTCTAGAGGCATAAGAGGGCAATGGAGTGAAGAAGACTTAACCCAAGCGCTTCAAGCTGTGAACGCGGGTATGTCAGTAAATAGGGCCAGTACAACTTATAATCTACCAAGGAGAACCCTTAGGCGCTATGTCGAGCAAGGAGCGCTTCAAGCTGTGAACGCGGATATGTCAGTAAATAGGGCCAGTACAACTTATAATCTACCAAGGAGAACCCTTAGGCGCTATGTCGAGCAAGGTAAGACAGGAAAAGCCGCCATGGGTCGTAAACCCATCTTAACTCAAGAACAAGAAGCTGAATTAAGTCGAAGAATCATTCGGTTATCCGAAGTAGGTTACCCGCTAACTGCAAGTGTACTTCGTCGATGTGTTTACCGGTATACCAAGTTGAATAATATTCCAAATCCTTTtagagaagaaaaagaaaaggctgGGCGATATTGGCTAAAGGGATTTATGGAAAGAAACCCTCAAATTCGAGTTAGAAAAGCACAAAATCTAAATCCGGCAAGAGCCCAAAAACTAAACAACATCATTGTAAATGACCATTTCACCAAGCTAGAAGAAGTATTGCGATCTTTACATATAATGGAACATCCTGAAAGAATCTATAATATCGACGAGAAAGGATGCAGGCTCTGTTTGCACCATCAACAAAAGGTGTTAGCTGCAAAAGGGTCACGGCGGGTACATCTCGTTACGAACGAACACGCACAAAATGTTTCAATTGTAGCCTGTGGTAATGCTATCGGAACAGCAATACCTCCCGTAATTTTATTTAAAGGGAAACACGCACAAAATGTTTCAATTGTAGCCTGTGGTAATGCTATCGGAACAGCAATACCTACCGTAATTTTATTTAAAGGGAAGCGCATGAAACAAGAATGGAATGATTCAATGCCTGCAGGGACTTCAGTACTTATGACCGAAAAAGGTAGCATGACACAAGCAGCATTTTCCCGTTGGATAGAGCATTTTGCAAAGGAAGATAGACAAGCAGATATGCGCTTATGTGTTAAATGCAAGGCTTACGTCCATGAGGAGTGCATGGGACTCACTAAAGACGATGTCATAGAAATTTTCATGTGTCCAGATTGTggataa
- Protein Sequence
- MGRIRSRGIRGQWSEEDLTQALQAVNAGMSVNRASTTYNLPRRTLRRYVEQGALQAVNADMSVNRASTTYNLPRRTLRRYVEQGKTGKAAMGRKPILTQEQEAELSRRIIRLSEVGYPLTASVLRRCVYRYTKLNNIPNPFREEKEKAGRYWLKGFMERNPQIRVRKAQNLNPARAQKLNNIIVNDHFTKLEEVLRSLHIMEHPERIYNIDEKGCRLCLHHQQKVLAAKGSRRVHLVTNEHAQNVSIVACGNAIGTAIPPVILFKGKHAQNVSIVACGNAIGTAIPTVILFKGKRMKQEWNDSMPAGTSVLMTEKGSMTQAAFSRWIEHFAKEDRQADMRLCVKCKAYVHEECMGLTKDDVIEIFMCPDCG*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -