g93867.t1
Basic Information
- Insect
- Diabrotica virgifera
- Gene Symbol
- Kdm5
- Assembly
- GCA_003013835.2
- Location
- ML020169.1:71137-76077[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-10 1.6e-06 31.1 0.1 4 44 170 209 167 211 0.93
Sequence Information
- Coding Sequence
- ATGAGTGAGAAAGGGGATAAATCATCCACCAGCAGTAATAGTCCAACCAAAACAAGAAGTGCTGCAAGTAGTGCCCGGAATAGTCCAAATACAAGAAACGGTCCAATTAATACTAGGAATAGTCCAAATATATCTAAAAGTGTTCCCAGTACTTCTAGAAATAGTCCAAATATACCTAAAACTGTTCAAAGTATTTCCCGcactagtttgaataaatctggAAGCGTTTCAAACAGTTCCTCGGCTAGTTACAGCCAACAGAAAGAAGAAACTTTTGTATTTCAGGAGCCACCAGAAGCTATAGTACTGAGACCAACACGGGAAGAATTTGAGGATCCTCTTGCCTTTATTGCTACAATAAGACCCCGAGCGGAAATTTATGGAATATGTAAAATAATACCACCAGAAGACTGGACACCGCCATTTGCTGTTGATGTGGATAAACTTACATTCACTCCCAGAGTGCAACGACTAAATGAACTTGAGGCAATAACCAGAGTCAATTTTAATTTCTTAGACCAGATAGCCAAATTTTGGGATCTACAAGGATCTTTGTTTAGATTTCCTATGGTGGAAAATAGACCTTTGGATTTATATAACTTACATCGTATAGTACAGCAGTTGGGTAAGCAAAACTAA
- Protein Sequence
- MSEKGDKSSTSSNSPTKTRSAASSARNSPNTRNGPINTRNSPNISKSVPSTSRNSPNIPKTVQSISRTSLNKSGSVSNSSSASYSQQKEETFVFQEPPEAIVLRPTREEFEDPLAFIATIRPRAEIYGICKIIPPEDWTPPFAVDVDKLTFTPRVQRLNELEAITRVNFNFLDQIAKFWDLQGSLFRFPMVENRPLDLYNLHRIVQQLGKQN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -