g71395.t1
Basic Information
- Insect
- Diabrotica virgifera
- Gene Symbol
- Xbp1
- Assembly
- GCA_003013835.2
- Location
- ML017191.1:216490-242189[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-14 3.7e-10 42.4 17.6 2 65 41 104 41 104 0.97 2 2 8.6 6e+04 -3.2 0.3 37 46 163 172 152 184 0.54
Sequence Information
- Coding Sequence
- ATGACGACGACAGTGTCAtcaatattgaaatttttggaAAACGCAGATAAAAATTTTGCCATGGATACAGATGCAGACATTCCaaaaagcaaaaagagaaaattggaCCATTTGACATGGGAAGAAAAATTACAAAGGAAGAAATTAAAGAATCGTGTAGCAGCCCAAACTTCCCGAGATAGGAAAAAAGCCAAGATGGAACAGATGGAGCAGGCTCTCCAGCAGCTCTTTGTGAAAAACGAGTCCCTATTAGTCGAATGTAAAAACCTCAAGCTCGCCAACCAGAAGCTCCAACAAGAAAACACAGAACTGTACAATCTCCCTAAATGGATCCACAGCGTCCCTCCTTCTGCCGAAAGGAAGAGTCACACACCCAGCAGCGGCTTTGAGCAAACAGCAGACAATGGTCTTGTTGAAAATCGTACTGACCTGCCTTCTTTACCGGACCTCCTTGATGAACTCGAGGCAGACGTCGACCTTAACTCGTTGGAACAACTCACTCAGAGCCTCCTTGAAGATATCGCCAGAGACTTGGAAGCTACTGCTCAGAAAACAAGTAATGAAGAATCAGGAAGTAATGGAAGTAGCTATGGAGAAATGGTGGGGAAGACATCAACAGAGTTGGAATCCAGTGGGTGCACAACCAATACGAAGTCGCTAGAAAGCGACATCTCGGAGTATTTGCTACTTCACCACAACTATGCTGCTAAACCCCCATTAGACGACACATTAAAAACCAAGAGCCCAATTAATAGAAACCGAAAATTGAAAACCATCAAACCAAAACGCAAGATTGTCACTACAAAACCTGTTGTACCTGAAAGTGATGTGGTTTATGGAACACTTGATGAAGTTAGCAATGTTGTCACGATAATAGTGGACAGTAATGGAGTACCAATGACAGAAGAAGCGTTACAAAGGTTAGAAAACAGAGAGGAGGAAACCCAACTCACTGTTCCCTTACCTCCTGTAACACAAGGTGAATTGGTTACTCCGTTACCAGTTGCAGAATCAAACAGATCTACTTCATCATCTGTTGCAGAATCACACCTCACTGTTCCAACAGCCATGCTAGAATGTTTGTCTCCAATGTCCTGCAGTGACTCTGATCGAGGATATGAATCATTAGATTCTCCGATTAGTTTACCTGAAGATCTTTGGGACCAAAGTATATCAGAGCTATTTCCATCTTTACTCTAG
- Protein Sequence
- MTTTVSSILKFLENADKNFAMDTDADIPKSKKRKLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKMEQMEQALQQLFVKNESLLVECKNLKLANQKLQQENTELYNLPKWIHSVPPSAERKSHTPSSGFEQTADNGLVENRTDLPSLPDLLDELEADVDLNSLEQLTQSLLEDIARDLEATAQKTSNEESGSNGSSYGEMVGKTSTELESSGCTTNTKSLESDISEYLLLHHNYAAKPPLDDTLKTKSPINRNRKLKTIKPKRKIVTTKPVVPESDVVYGTLDEVSNVVTIIVDSNGVPMTEEALQRLENREEETQLTVPLPPVTQGELVTPLPVAESNRSTSSSVAESHLTVPTAMLECLSPMSCSDSDRGYESLDSPISLPEDLWDQSISELFPSLL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -