Dcan021941.1
Basic Information
- Insect
- Dexiosoma caninum
- Gene Symbol
- nfxl1
- Assembly
- GCA_963924685.1
- Location
- OZ004729.1:11673271-11676604[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 3e+04 -8.1 6.4 15 19 157 161 156 161 0.82 2 19 0.022 3.3e+02 2.2 0.2 4 10 192 198 191 199 0.96 3 19 1.8e-08 0.00027 21.6 16.0 1 18 206 222 206 223 0.98 4 19 1.9 2.8e+04 -4.0 2.3 6 10 249 253 248 253 0.88 5 19 0.007 1e+02 3.7 12.5 1 19 259 278 259 278 0.87 6 19 1.2e-07 0.0018 18.9 12.5 1 19 313 331 313 331 0.99 7 19 1.7 2.5e+04 -3.9 0.8 6 10 356 360 355 362 0.54 8 19 3e-07 0.0045 17.7 14.6 1 18 366 383 366 384 0.96 9 19 0.31 4.6e+03 -1.5 0.4 1 5 393 397 393 402 0.75 10 19 2 3e+04 -5.0 2.3 5 10 407 412 407 412 0.91 11 19 5.2e-05 0.79 10.5 13.5 1 18 418 435 418 436 0.98 12 19 1.6e-10 2.4e-06 28.2 14.5 1 19 445 463 445 463 0.98 13 19 0.5 7.5e+03 -2.2 12.8 9 19 508 518 499 518 0.87 14 19 0.00048 7.2 7.5 6.2 1 11 530 539 530 540 0.95 15 19 1.3 1.9e+04 -3.5 1.0 6 10 599 603 598 603 0.83 16 19 5.4e-06 0.082 13.7 5.9 1 11 609 619 609 620 0.96 17 19 0.081 1.2e+03 0.3 17.6 4 18 650 664 648 665 0.94 18 19 2 3e+04 -5.5 2.1 9 13 671 675 670 675 0.72 19 19 2.7e-06 0.041 14.6 11.5 1 16 716 730 716 736 0.92
Sequence Information
- Coding Sequence
- atgGCACCAACAAAAAAACCACAGCAGATTTCCGCTAAAAATCCCGTTGAAAAATTCAAAGAGGCTCATGCAAGAAACTTAGAAGTTGCTAAAAAGTTGGTCGAAAATTATGTATCATCTTCGGAAGATGAAGATGACTTAGATGAGCGAACAATTTTAGAATCCATATATCAACATTATAATAAGCGCGAGGAAGATGTGCAGTATTTAGCGAAAACAGCAGGCTTTTTAGAAAATCTTTTGCAAACTGGAGCTGCTACATGTCTCATTTGCATTGGAAGTATAAAACGTTCAAACTCAATATGGTCATGTAAACATTGTTATTGCTTCTTTCATTTGAACTGCATTCAAAGATGGTCTAATGATAGTATGGCACAGGCAAAAGCCCAAATTCAAGATGTACAGGGTTACTACAATCATATGGGAGAATATGTGTCGCCAAAAAAACCCAAAGCATTGCATTGGTGTTGTCCGCAATGTAGGAGAGAATTTGTGCCCGAAGAAAAACCAACGGAATATATGTGTTTTTGTGGCAAAGAAACTAATCCGCCGGCCCAACAATGGTTACTACCACATACGTGCGGTGAAATATGCGGTAAATCCTTAATGCCACATTGTGGGCATAAATGTACATTACTATGTCATCCGGGACCGTGTCCACCTTGTGCTCAATATGCGATTACATCATGTAAATGTGGAAAATCTTCTTCAAAGTCCATTCGTTGTACTGACAAGCTGTGGGAGTGccagaaaaaatgtgagttgTTACTGCCGTGTAAGCAGCATTTATGCAACAAAATCTGTCATAAGGCCGAGCAATGTCCACCTTGCCAACAAACCAGTATGCAACAATGTCAATGTGGTAGAGAAACGACGAAACGCAAATGTTATGAACAGAAGTggcaatgtaaaaatatatgcgGGAAATCATTTGCCTGTGGTTTAcatacttgtaaaaaaaattgtcactaTGGTGACTGTGGAGATTGTCCTTTAAGTTTGCCACGATTCTGTCCATGTGGGAAAACTAAAAAGATTGGCCCATGCACAGAGGATATCGATACTTGCGGTGATACTTGTCAAAAAATATTAGCTTGTGGATCTCACACTTGCACACAAcgttgtcataaaggaaattgCCATTTGtgtttaatcattacaaaaaagaaatgtcgCTGTGGTATGCACGAAAAAGAATTACCGTGTTCCAAGGAATTTACTTGTGAAacgaaatgtaaacaaattcgAGATTGTGGCAAACATGCATGTAATCGtaagtGCTGCGATAGAAACTGTCCATCATGTGACAAAGTGTGCGGCAAACCATTGTCTTGTGGTAAACATAAGTGCCAATCGATATGTCACAAAGGACCTTGTTATCCTTGCCaacaaaaatcacaaattaattGTCGTTGTGGTAAATCTAAAAGAGTCGTTCCGTGCGGTCGTGAGCGAACAGCGCGTATTGTTTGCTTGGAACCATGTCGTATTCCTTCAAAGTGTCACCATAATAACAAACATCACTGTCATAAAAATGAATGTCCACCGTGTTCCTTACCGTGCGGTTTACCAAATGACATCACCAAATGTGGTCATAAGTGTATGTCGAAATGTCATGCATCTGTTAAAGTAGCTAAAAAGCCAAATACAAATACTATGAGCATGTGGGACGCTACTAAGCAGtTTGAATTGAAACAAATGCCCCATCCTCGATGTGAAGAAAAAGTCAGTGTAATTTGTATTGGTGGCCATGAAACATCCGATTTTCCCTGTTGGGATTCTAAACCAACATCTTGTCAACGTTCGTGCAACCGTTCGCTGACTTGTGGTAATCACAAATGTACTGTAGTCTGTCATGCAGTGGCGAATTTAGATGATATGAAGgaGCAAGCTGGCTGTTCTTCCTGTGAAAAGGGTTGCGAAATTTCTCGACCCCAAGGATGTGTTCATAAGTGTTCTAGACCTTGTCACCTACCCCCTTGTAATACTTGCTGTGTTTCTATTAAAACTAAGTGTCATTGCGGTTTAATGTCTATTGCTTACAAATGTAGCGATTATTTTGATATTGAAGCCAGTGAAGGTGAACTTTTAGAGAAACAAGAAAACTTGAAAAGTTGTGGAAATCgatgtttaaaaaatTACCCTTGCGGTCATCGATGCACAGCTATATGTCATTCTGGTCATTGTCCCTATCCCGACTTTTGTCGCAAAAAAATGCGCATCTACTGTAATTGCAAACGTTTAAAATCCGATATATCGTGCGACAAACATCGAAGTGGTCTTCGTAAATTACAGTGCGATGAAAAGTGTATTGAAGCAGAAAAAATCTCAGAACAAGCACGACGGACAGAAGAGGAATTACGAAGAAGACAAGAAGAAGAACGTAATCGTTTGGAAGTggaacaatttgaaaaaaaatttagcaaacgCAAGCCCAAAGAACGTAAAACATTAGAAGTGAGACAGCAAAATCCAATAAACTGGAAACTCTTTGGAGTTTATGCCGCCATTGCAGCAGCTGTATTATTAGCAATTGCTTTAGCTTTTTACGAAGATCATTAA
- Protein Sequence
- MAPTKKPQQISAKNPVEKFKEAHARNLEVAKKLVENYVSSSEDEDDLDERTILESIYQHYNKREEDVQYLAKTAGFLENLLQTGAATCLICIGSIKRSNSIWSCKHCYCFFHLNCIQRWSNDSMAQAKAQIQDVQGYYNHMGEYVSPKKPKALHWCCPQCRREFVPEEKPTEYMCFCGKETNPPAQQWLLPHTCGEICGKSLMPHCGHKCTLLCHPGPCPPCAQYAITSCKCGKSSSKSIRCTDKLWECQKKCELLLPCKQHLCNKICHKAEQCPPCQQTSMQQCQCGRETTKRKCYEQKWQCKNICGKSFACGLHTCKKNCHYGDCGDCPLSLPRFCPCGKTKKIGPCTEDIDTCGDTCQKILACGSHTCTQRCHKGNCHLCLIITKKKCRCGMHEKELPCSKEFTCETKCKQIRDCGKHACNRKCCDRNCPSCDKVCGKPLSCGKHKCQSICHKGPCYPCQQKSQINCRCGKSKRVVPCGRERTARIVCLEPCRIPSKCHHNNKHHCHKNECPPCSLPCGLPNDITKCGHKCMSKCHASVKVAKKPNTNTMSMWDATKQFELKQMPHPRCEEKVSVICIGGHETSDFPCWDSKPTSCQRSCNRSLTCGNHKCTVVCHAVANLDDMKEQAGCSSCEKGCEISRPQGCVHKCSRPCHLPPCNTCCVSIKTKCHCGLMSIAYKCSDYFDIEASEGELLEKQENLKSCGNRCLKNYPCGHRCTAICHSGHCPYPDFCRKKMRIYCNCKRLKSDISCDKHRSGLRKLQCDEKCIEAEKISEQARRTEEELRRRQEEERNRLEVEQFEKKFSKRKPKERKTLEVRQQNPINWKLFGVYAAIAAAVLLAIALAFYEDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -