Basic Information

Insect: Dexiosoma caninum
Gene Symbol: -
Assembly: GCA_963924685.1
Location: OZ004726.1:23253319-23254998[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.034 2.7 9.3 0.4 2 23 225 247 224 247 0.95

2 8 0.38 30 6.0 0.9 6 23 256 273 256 273 0.99

3 8 0.00015 0.012 16.7 7.3 1 23 279 301 279 302 0.96

4 8 0.0036 0.29 12.4 3.2 1 23 306 328 306 328 0.96

5 8 0.097 7.8 7.9 0.4 1 23 336 359 336 359 0.90

6 8 5.9e-06 0.00047 21.2 2.5 2 23 366 387 365 387 0.97

7 8 3.5e-05 0.0028 18.7 4.8 1 23 455 477 455 477 0.98

8 8 6.3e-06 0.0005 21.1 1.3 1 23 483 506 483 506 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.034	2.7	9.3	0.4	2	23	225	247	224	247	0.95
2	8	0.38	30	6.0	0.9	6	23	256	273	256	273	0.99
3	8	0.00015	0.012	16.7	7.3	1	23	279	301	279	302	0.96
4	8	0.0036	0.29	12.4	3.2	1	23	306	328	306	328	0.96
5	8	0.097	7.8	7.9	0.4	1	23	336	359	336	359	0.90
6	8	5.9e-06	0.00047	21.2	2.5	2	23	366	387	365	387	0.97
7	8	3.5e-05	0.0028	18.7	4.8	1	23	455	477	455	477	0.98
8	8	6.3e-06	0.0005	21.1	1.3	1	23	483	506	483	506	0.97

Sequence Information

Coding Sequence: ATGGAGCACTGCATAGTTTGTTTAGAAACCAAAAAAGACACATTTTCTCGAATAAGTACAGCATCCAGTGAATGGATCGAAAGCAAAATGAGAAACATAATTGAGAAACATTTGTGGTGGTGGTACTTGGAGTCGCCGTATTATAATAATGGACTTGCAAGGTGGATTTGTTGTGAGTGCTGGCAGGAAATATCATCGTTCAATCGCTTTTATGTTAAAATTGAAAGAGCTCACaggaatttcaataaaattttgtcggTTTCTAAGCCTCTTACCAAAAGGCAGCAAGAAGAAACAATTATAAGCCTAGAGGAAAATGATAGTGTTAAATCTACTACCGAATTAATATTGCCTGAAGAGCGACAACGTAAAGAAAGCGTAGAAGAACTAGCCGAATGTGTGGACAATTTTGAAGAAGAAGTAATTAGCATAGTGGagataaaaaatgaattttgtgtTAGTCCAAACGGATGTGAAATAAATTCTGAATCTGAAAACACTAGCAGtcttaataatgaaaatggctttgACGAAAAGCAAAGCGATGGACATGAGCCTCTTACAAATAAAACTACAAAGACAGCTAATACCGAAAGAGTGAAACTCAAAGAGAATTTAGTATTTCAAACAGTTCCCTTCGATAGTTTCTTTGTGGAAAATAAACATAAGCTTGAATGCTGTATTTGTAATGTGACCTTGCCGGACTTTGAGTCTCTTATACAGCATTACAGAAATGAACACAATACTCGAGGTTATTCCATATGCTGTgggaagaaatattttaaacgttgCTTATTAGTTGATCATCTTAAAGTACATGCTGATCCTAATATTTTCAGTTGCCATCTTTGTACAAAAACGTATAATACACGCCGTAGTTTGAGAAGACATTTAGACACACATCATTCAACTACATTCAAATGTGATGAATGCggcaaatcattttttaaattacacgtTTTTGAATACcataaattaattcatttaacggaaagtgaagaaaaatataactgcttgcaatgtgaaaaaaaatatgcaaccgATTCTTTGAGGCGTCGGCATGTAGACGCTGTACATTCCAAAAAGTATGACAAAACTTGCAACATATGTGGAAAGGCATATTGCAGTAGCACTTATTTGTTACGTCATATGAAGGAACATGACGGGAGACATGGACCGATGGAGTCATGTCATATATGTGGTGTTGAATTGTTAGATAAAAATCGACATTCGCGGCATATGAAAAAGCAACACCTGGAAGAAAGTCTAAAGCAGCAGATCTGTCCTCATTGTTCCAAACTTTCACCTTGTATGAATGCTCTTCTTCGACATATTTACAATAAACACAATATGGAGCGCAAATATGTCTGCAATGTATGTAAGAAGGTTTTCAAacgatgttttaaattaaaagaacattTATCTACCCATACTGGAGTGGCGTTATACACGTGTCCCCACTGTCCCCGAACATATATTTCGAAAGGCAATATGAATCAACATAGGAAAATTGTTCATCGAAAAGAATGGGAACTTAGTAGGGAAACAAAATTGAATCAGGGTTCTGGCAACGCAATATCGTATGACGTTGGGAAAAAAACTGAAGATGCGCAGAAAACATCTCAAGATCTTGTGATTTCAACAGAATCTGGCACAAAAGTATATACGTTGCATTTCTAA
Protein Sequence: MEHCIVCLETKKDTFSRISTASSEWIESKMRNIIEKHLWWWYLESPYYNNGLARWICCECWQEISSFNRFYVKIERAHRNFNKILSVSKPLTKRQQEETIISLEENDSVKSTTELILPEERQRKESVEELAECVDNFEEEVISIVEIKNEFCVSPNGCEINSESENTSSLNNENGFDEKQSDGHEPLTNKTTKTANTERVKLKENLVFQTVPFDSFFVENKHKLECCICNVTLPDFESLIQHYRNEHNTRGYSICCGKKYFKRCLLVDHLKVHADPNIFSCHLCTKTYNTRRSLRRHLDTHHSTTFKCDECGKSFFKLHVFEYHKLIHLTESEEKYNCLQCEKKYATDSLRRRHVDAVHSKKYDKTCNICGKAYCSSTYLLRHMKEHDGRHGPMESCHICGVELLDKNRHSRHMKKQHLEESLKQQICPHCSKLSPCMNALLRHIYNKHNMERKYVCNVCKKVFKRCFKLKEHLSTHTGVALYTCPHCPRTYISKGNMNQHRKIVHRKEWELSRETKLNQGSGNAISYDVGKKTEDAQKTSQDLVISTESGTKVYTLHF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00435899;
90% Identity: -
80% Identity: -