Basic Information

Insect: Dexiosoma caninum
Gene Symbol: -
Assembly: GCA_963924685.1
Location: OZ004728.1:72284250-72291859[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00046 0.037 15.2 1.2 1 23 120 142 120 142 0.98

2 15 6.9 5.5e+02 2.1 4.4 1 23 148 171 148 171 0.94

3 15 4.7e-05 0.0038 18.3 3.2 2 23 375 396 374 396 0.97

4 15 4.2 3.4e+02 2.7 3.3 1 23 402 425 402 425 0.93

5 15 0.3 24 6.3 1.7 1 23 446 469 446 469 0.97

6 15 1.9 1.6e+02 3.8 3.4 2 23 531 552 530 552 0.95

7 15 0.005 0.4 11.9 2.7 2 23 720 741 719 741 0.96

8 15 0.04 3.2 9.1 2.9 1 23 747 770 747 770 0.96

9 15 0.11 8.7 7.7 0.7 1 23 841 864 841 864 0.96

10 15 0.48 39 5.7 2.0 1 22 997 1018 997 1018 0.95

11 15 0.026 2.1 9.7 8.5 1 23 1035 1057 1035 1057 0.98

12 15 3.2e-05 0.0025 18.9 0.4 1 23 1062 1084 1062 1084 0.97

13 15 0.026 2.1 9.7 7.0 1 23 1090 1113 1090 1113 0.94

14 15 0.0015 0.12 13.6 1.1 1 23 1118 1142 1118 1142 0.89

15 15 0.0074 0.59 11.4 1.8 1 19 1148 1166 1148 1171 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00046	0.037	15.2	1.2	1	23	120	142	120	142	0.98
2	15	6.9	5.5e+02	2.1	4.4	1	23	148	171	148	171	0.94
3	15	4.7e-05	0.0038	18.3	3.2	2	23	375	396	374	396	0.97
4	15	4.2	3.4e+02	2.7	3.3	1	23	402	425	402	425	0.93
5	15	0.3	24	6.3	1.7	1	23	446	469	446	469	0.97
6	15	1.9	1.6e+02	3.8	3.4	2	23	531	552	530	552	0.95
7	15	0.005	0.4	11.9	2.7	2	23	720	741	719	741	0.96
8	15	0.04	3.2	9.1	2.9	1	23	747	770	747	770	0.96
9	15	0.11	8.7	7.7	0.7	1	23	841	864	841	864	0.96
10	15	0.48	39	5.7	2.0	1	22	997	1018	997	1018	0.95
11	15	0.026	2.1	9.7	8.5	1	23	1035	1057	1035	1057	0.98
12	15	3.2e-05	0.0025	18.9	0.4	1	23	1062	1084	1062	1084	0.97
13	15	0.026	2.1	9.7	7.0	1	23	1090	1113	1090	1113	0.94
14	15	0.0015	0.12	13.6	1.1	1	23	1118	1142	1118	1142	0.89
15	15	0.0074	0.59	11.4	1.8	1	19	1148	1166	1148	1171	0.93

Sequence Information

Coding Sequence: aTGAATGACAAGAGTTTTGTAGTAGACTACAGTAATGTTTGTCGGACATGCCTACAATCAAATGTGGATATGATTAATTTAAGTATGTTTATTAATGATAACAATAAAGAGGGAAAATCAAAAATCTCATACATGGAGTGTTTATTAATGTGTACACAATTTGAGGATAGTGCAGACGTCGAATTGCCCCAGTTAATTTGCTTAGAATGTGCATCTGCTTTGCAAGTGGTATATTGGTTTACTACAAATGCAACACAAGCACAAGAATTGTTAAAACAGAAGTTACTAGAAATAAGAcggaaaaagttaaatattgaaaacaatgCTGCATCGGAGGgtattaaaaaatctaaaaggtATCGTTGCAAAATTTGTAATGAGAAGGTGGAAACAAAAAAGTCTCTTAAAGATCACGTCAAACTGCATTTGGATATTATTGTCTATACTTGTCAATTGTGTTCTTTTGAGACGCATAATCGACATAGCTTGTCTGATCATTATATACAAATGCATTGCTTGGAGCCTACAAAGGAACAGTTGAAACCAAAAACAAAGTTATCATCAACATTCTCTTCATCTTCGCCAAAAATCTCAGTTAATGATCGCTTGGATGGCGCcataaaaaatgaatattttcaaCTAATACCCGAAGATTTGCACCAAAACTCTAATCAGTCGTTTTCAAAACCGGTTATTACAACTAATTCTTCATGTAATACAGCGTCTCTACAATTTCCCACAATAATTCCAACCAATCCTAAATATACAACAATACCATTAGAGAGGGaacaaaatcatgattttcgAATAGCCAATGAGTTTATGGTTATGGCAGACGGCAGTTTAGAAAAAGTTCAAAACAAAGGTGTCGTTATAGAATATATAGATACTATAAATAATGGCAATTTAACATTAGACGATGGTTTAGTTTTAGACAATATAATGCCGATTCAAAACATAGACAATACCGCAATGTTACAGCAAAATTTGGAGCAAATGGATTTTGATGACTTAATTATTGAGGATTCGGGTGATGTTATGGAAGAAATacaatCAAATATTATACTTCCTCTGGAAGAAGAAACAATACCGGCCACTATTATTCAACAGCCTAAAAAGACAATGTGTAAAATTTGTACCAAAGATTTCTGTACGcaagaagaattaaaatatcATATGCTAACACATAACGAAATTCCACACTTTTTTTGTGATGGATGTAAATTTTACACGTTCTTTAGGATTGATCTACAACAacattataaaagtaaacataacatacaaccaacaaacaaacaattacAACCAAgaaacaaacagaaaattaatGAGGTTTATGCatgtgatttttgtttttatgaaaccGAGGTAAAATTAGATCTTAAAAAGcactataaaacaaaacataatattGAAGCCAAAGAAATCCATTCAAGACCGATAAAGGGAGAAAAGTTGAAAACAAAGTTCTCACCTCTgccttcaaaaataaaatcactcaCAAAAGTTAACGAAAAACCAGAAGAAAcgtcaaaaattataaaaattcaatctCCAGAATTGTCAGCACCAGACTATCCTAATGGACTGAATTGTCGTAAATGTCATGAAGTGTTTTATTGGCGCAAAAAACTGTATGAACATTATAAGATGCACAATGCTGAAGAAGCTGCACTTAAACAGCAGAATCAACTTATAAAAATTGGAACCATATCGGCTTCTTCAATTATTTGTGGAACTAAAGCAAAAACTGTAAAAACACATTCCCCTCAAACATCGAATATTGTACAGACTCCGGGCTACTCTAGCTTAGGAACGTTGGATTTAAATGTTACTACGTCAAGCATTAATACGATAAATTCATTAACAGCACTGACGCCATCTTCAAGTTCTACCTATACCTTACCTTCAGATGCCATACCGCAGATAGTGGAAATGGATCATACCATAGAAAATTTCGATTTCGATTTTAATTGTGACGATGATGTTTTATTCCGAGATTttggtgatgatgatgttgatgttgaaaATGATTCCGATGAAAATGATTCTGAATTTCGAAATGTTTTGCTTACGTCTGATGACGACTTTGAAGATTTGTTACTGAATCCAAATGATAATAGCAATGCATTGGTCGATGCCGCCGCATCTGGTTCATATTGTGGCCATTGTCAAAAGTCGTTCTTAAGTCAATATCAGTTTGAAAACCATATGTTTGTTCATAGAGgaCTGGCTCCTTATCGTTGCGAAATGTGTACGAATATTTACAATACGAAACGTTGCTTGGTACGTCATTACAAAGCAGTTCATAAAAATGTGCCTTCTAGAGATATGATTCAAGCTAAAGGCGATAAAGTTTGTGACGACAAAACTCCTGTCGAACTTTTAAAACTAGAAGCAACATCTTgttTTATGTGCGCAAAATGTCCATATGAATCTTctgaattaaacaatattaaatttcatttacaatCTAGTCATAACATAAATGATGaatctTATGTAAtgaaaaAATTGCCATTTGAATGTCCGCGTTGCATACGATCATATGAAAGTAAACTGAAATTATTGAGACATTTGGAACGTAACCACAGTTTGACACCAATTAATCAACTTCAACCTCGTTTTAATAGTATGGCGAATACAGCGGAATTAGAGACGAGTACGTCAAtatcaacaacaataaataatcaTGTAAATATGACGATAACCGAAAGTAGCGAAACAAACGCCAGTTGCGGATACAGTGATATATTCGCCAAACAAGAGCGAGAACTACACCAAAGTTCTGGTCGAGATGCCATAGCACGTCAATTTGATGTGACTCTCTTTGGAGAAACCACCAGCGCAACATCACGTCTGGTTTATAATCAAACCTCTATCAACAGCAATAATGCCATTATCACATTGTCTTCTTTCTCAGATGTCTATGCCACATTGCCGCTCACACCAATAGCCCTAGATGATAATGATACCGATCAAGCtctatttaaatgtaaaatatgccTTTTGACCTGTTACACTATTGAAAcatttaatgaacatattaaacGTATTGAGTGCCGAAAAATAGACATAAGTAATGCTGGCGACAGGGTGTTATTTGAGTGTGAGATATGTCACTGTAATTATAAAACAATGTATTTATTGAAACATCATTTAAAACGCCACATTGCCCGAAAGTTTCCATGTGACAATTGCCCCAAAACTTTTATAAACAAGGTTGAGTTAGAAGCACACAAACATGTGCACAGTGGCGAGAGACCTCACAAATGTGATGCGTGTACAAAATCATTTCGTTATGTCCATCATTTGAAACGCCACAAAGATAGCGCTCACTTTGGTAAACGTCACGCTTGCAAAGAACTAAACTGTGATCGTAAATTTACAACGTTGGCACAATTAAAGGTACATATGTGGACACACAACGGGATTGTACCATACAAATGTCCAATTTGTAATcgagtttataaaaaaagattattGCTGCGTGAGCATTGCGTAAAAGTCCATTACATCAATTTGAGCGAGGAAGAAATGGCCAAAATATTTCGTAATAGTTTAGGATATACAAATCCTCATGATTTCACCGTTACCATTggcaatggaaaaatgttaaggCGTGGTGATGTGGAAACTATGATTGCTTCTGGTGTTATAAAATCTTCGTTTAACTAG
Protein Sequence: MNDKSFVVDYSNVCRTCLQSNVDMINLSMFINDNNKEGKSKISYMECLLMCTQFEDSADVELPQLICLECASALQVVYWFTTNATQAQELLKQKLLEIRRKKLNIENNAASEGIKKSKRYRCKICNEKVETKKSLKDHVKLHLDIIVYTCQLCSFETHNRHSLSDHYIQMHCLEPTKEQLKPKTKLSSTFSSSSPKISVNDRLDGAIKNEYFQLIPEDLHQNSNQSFSKPVITTNSSCNTASLQFPTIIPTNPKYTTIPLEREQNHDFRIANEFMVMADGSLEKVQNKGVVIEYIDTINNGNLTLDDGLVLDNIMPIQNIDNTAMLQQNLEQMDFDDLIIEDSGDVMEEIQSNIILPLEEETIPATIIQQPKKTMCKICTKDFCTQEELKYHMLTHNEIPHFFCDGCKFYTFFRIDLQQHYKSKHNIQPTNKQLQPRNKQKINEVYACDFCFYETEVKLDLKKHYKTKHNIEAKEIHSRPIKGEKLKTKFSPLPSKIKSLTKVNEKPEETSKIIKIQSPELSAPDYPNGLNCRKCHEVFYWRKKLYEHYKMHNAEEAALKQQNQLIKIGTISASSIICGTKAKTVKTHSPQTSNIVQTPGYSSLGTLDLNVTTSSINTINSLTALTPSSSSTYTLPSDAIPQIVEMDHTIENFDFDFNCDDDVLFRDFGDDDVDVENDSDENDSEFRNVLLTSDDDFEDLLLNPNDNSNALVDAAASGSYCGHCQKSFLSQYQFENHMFVHRGLAPYRCEMCTNIYNTKRCLVRHYKAVHKNVPSRDMIQAKGDKVCDDKTPVELLKLEATSCFMCAKCPYESSELNNIKFHLQSSHNINDESYVMKKLPFECPRCIRSYESKLKLLRHLERNHSLTPINQLQPRFNSMANTAELETSTSISTTINNHVNMTITESSETNASCGYSDIFAKQERELHQSSGRDAIARQFDVTLFGETTSATSRLVYNQTSINSNNAIITLSSFSDVYATLPLTPIALDDNDTDQALFKCKICLLTCYTIETFNEHIKRIECRKIDISNAGDRVLFECEICHCNYKTMYLLKHHLKRHIARKFPCDNCPKTFINKVELEAHKHVHSGERPHKCDACTKSFRYVHHLKRHKDSAHFGKRHACKELNCDRKFTTLAQLKVHMWTHNGIVPYKCPICNRVYKKRLLLREHCVKVHYINLSEEEMAKIFRNSLGYTNPHDFTVTIGNGKMLRRGDVETMIASGVIKSSFN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -