Basic Information

Insect: Dexiosoma caninum
Gene Symbol: grau
Assembly: GCA_963924685.1
Location: OZ004728.1:87713076-87716649[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.1 87 4.6 0.4 6 23 263 280 263 280 0.97

2 9 0.0003 0.024 15.8 4.9 1 23 286 309 286 309 0.94

3 9 0.0026 0.21 12.8 0.6 1 20 317 336 317 339 0.92

4 9 0.087 6.9 8.0 0.3 1 23 347 372 347 372 0.88

5 9 0.02 1.6 10.0 2.1 3 23 379 399 378 399 0.97

6 9 0.18 15 7.0 0.1 2 23 408 431 407 431 0.90

7 9 6.9e-05 0.0055 17.8 3.5 1 23 438 461 438 461 0.97

8 9 4.3e-05 0.0035 18.4 2.9 1 23 466 488 466 488 0.97

9 9 0.00072 0.057 14.6 5.6 1 23 494 517 494 517 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.1	87	4.6	0.4	6	23	263	280	263	280	0.97
2	9	0.0003	0.024	15.8	4.9	1	23	286	309	286	309	0.94
3	9	0.0026	0.21	12.8	0.6	1	20	317	336	317	339	0.92
4	9	0.087	6.9	8.0	0.3	1	23	347	372	347	372	0.88
5	9	0.02	1.6	10.0	2.1	3	23	379	399	378	399	0.97
6	9	0.18	15	7.0	0.1	2	23	408	431	407	431	0.90
7	9	6.9e-05	0.0055	17.8	3.5	1	23	438	461	438	461	0.97
8	9	4.3e-05	0.0035	18.4	2.9	1	23	466	488	466	488	0.97
9	9	0.00072	0.057	14.6	5.6	1	23	494	517	494	517	0.98

Sequence Information

Coding Sequence: aTGTTATGTTGCGTATGCTTACTGCAAAAccctaacacttttggggtttTTGATGATACATTGAAATCACTCGATATTGCTGAAATTATACATCAACACTTTTGGTTTAAGCTGGAGCCCAATGATGATAATCCCATACAAGTTTGTTTTCAATGTTGGGATAAAATCAAAGATTTTCATGACTTTTACCAAACAATACAGAAAACACACAACTCACTTCAGCATCAGAGTGCAGCCATTAAGGAGGAGGAGGAAAAACCTTGTACCAGCACTATTAAACAGGAACAGGAGGCATTCGAGGAAAATTTAATGCAAGTAGAAGTGGAAATCGACGTAAATGCCAATGAAGATCAAGAACCTGCACTTGGTAAAGAAAACCCTTTAGAAGCAGAACGCATTAATGATGATTTAGAACAAAAGTCTGAAACAGAAAGTGATAATAGTTCCCTTAACGATTATGTAAACTCAAACATTAGCGAAAGTGATCAATCATCGACAGAAGCATTggatacagaaaataaaaaaaacaaaaagggcataattaaaagtaaaaaaaaacgaaatgcgAAAAGCAGTACGAAAAAGTCactcaaaaatattaataaaaaaggtgATAAAACAAAGAAGTGGACGGATAAATTTTTAGATCCCATTTTAACGGAACAGATGAttaaaaagcatataaatatgaTTTGCGATTTATGTGTTTTTGTTGGTTCTTCTTTTCCCGACATGGTGAGtcactttaaaaaatatcatcCTAAAGTACGTCCCTATATAATGTGCTGCGAAAGAAAATTTACCAAGCGTTATTATGTTGCGCAGCACGCACTTAAACATGAAGATCCAAATTATTttagGTGCGAAGAATGTAATAAATCCTTTACAACAACTTGTAGTCTTCGAACGCATAACTTGTCTTATCATGCACCTGAAGATGAGCTTTTACACTCTTGCGATTTATGTCCAAGAAAATTTGCTAGGCGAAATTTATTAGAACTACATCGACCCGTTCATATACCAAAAGAAGAGTGGACATTCTTTTGTAACAAATGTCCTACACAGAAAGCatttgcTACGGCATATTTGTTAAATATCCATAATGGTATGAACCACAAAAAAGCAGCCAACATTTGCCACGTATGCGCCAAAGAGATAAAAGATAAACATGCTTTTGAAAAACATGTTCGATTACACTTTGAAGATAGCGGACCACGTGTTAAATGCCCCTATCCCGAATGTGATAGCTGGCTAAAAGATGAAGATAACTTAAAGTCCCATTTGCAGAGACACAATCCTGAaggtaaaatatataaatgtacgGACTGCGGTAAGCTTTGTAAAAATCGTGGAGCACTTACAAATCATAAGCGATATAGTCACTCTAATGAAGTATTTCATTGTGAACAATGtgataaaacatttaaaaaagcaatatcATTGAGAgaacaTATGACACAACATACAGGAGAAACCTTATACAAATGTCCATTTTGTACTAGAACTTTCAATTCAAATGCAAATATGCATtctcataaaaagaaaaaacatccaATAGAATGGGATGAGtggagaaaaaataagaaaggcAGTgcccaaagttttattaatagtaACAATCCATTACATCAAAATtag
Protein Sequence: MLCCVCLLQNPNTFGVFDDTLKSLDIAEIIHQHFWFKLEPNDDNPIQVCFQCWDKIKDFHDFYQTIQKTHNSLQHQSAAIKEEEEKPCTSTIKQEQEAFEENLMQVEVEIDVNANEDQEPALGKENPLEAERINDDLEQKSETESDNSSLNDYVNSNISESDQSSTEALDTENKKNKKGIIKSKKKRNAKSSTKKSLKNINKKGDKTKKWTDKFLDPILTEQMIKKHINMICDLCVFVGSSFPDMVSHFKKYHPKVRPYIMCCERKFTKRYYVAQHALKHEDPNYFRCEECNKSFTTTCSLRTHNLSYHAPEDELLHSCDLCPRKFARRNLLELHRPVHIPKEEWTFFCNKCPTQKAFATAYLLNIHNGMNHKKAANICHVCAKEIKDKHAFEKHVRLHFEDSGPRVKCPYPECDSWLKDEDNLKSHLQRHNPEGKIYKCTDCGKLCKNRGALTNHKRYSHSNEVFHCEQCDKTFKKAISLREHMTQHTGETLYKCPFCTRTFNSNANMHSHKKKKHPIEWDEWRKNKKGSAQSFINSNNPLHQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01138463;
90% Identity: -
80% Identity: -