Basic Information

Insect: Dexiosoma caninum
Gene Symbol: -
Assembly: GCA_963924685.1
Location: OZ004728.1:14844319-14849107[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 5.5 4.4e+02 2.4 0.5 2 23 410 432 409 432 0.91

2 10 0.024 2 9.8 0.1 6 23 442 459 442 459 0.99

3 10 4.4e-05 0.0035 18.4 3.2 1 23 465 487 465 487 0.99

4 10 2.3e-05 0.0018 19.3 2.9 1 23 500 523 500 523 0.92

5 10 0.00035 0.028 15.6 2.6 1 23 531 554 531 554 0.97

6 10 2.3e-05 0.0019 19.3 2.1 3 23 562 583 560 583 0.92

7 10 0.02 1.6 10.0 0.4 2 23 595 617 594 617 0.96

8 10 0.00071 0.057 14.6 6.2 1 23 624 647 624 647 0.93

9 10 2.3e-06 0.00019 22.4 0.7 1 23 653 675 653 675 0.98

10 10 0.00013 0.011 16.9 1.3 1 23 681 704 681 704 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	5.5	4.4e+02	2.4	0.5	2	23	410	432	409	432	0.91
2	10	0.024	2	9.8	0.1	6	23	442	459	442	459	0.99
3	10	4.4e-05	0.0035	18.4	3.2	1	23	465	487	465	487	0.99
4	10	2.3e-05	0.0018	19.3	2.9	1	23	500	523	500	523	0.92
5	10	0.00035	0.028	15.6	2.6	1	23	531	554	531	554	0.97
6	10	2.3e-05	0.0019	19.3	2.1	3	23	562	583	560	583	0.92
7	10	0.02	1.6	10.0	0.4	2	23	595	617	594	617	0.96
8	10	0.00071	0.057	14.6	6.2	1	23	624	647	624	647	0.93
9	10	2.3e-06	0.00019	22.4	0.7	1	23	653	675	653	675	0.98
10	10	0.00013	0.011	16.9	1.3	1	23	681	704	681	704	0.97

Sequence Information

Coding Sequence: atggtggTTAAATGCTTACTTTGCTTAGAAAATCCTACAACACCGGGtccaaaatttttagaaatatttgggGAGGAAGGTTTGCGTCTAGATATAAGTGcgattataaacaaacatttttggttAAAGACAAACAGAAACTGTGAAGATGTAGAACAAATATGTATGACATGTTGGGAAGTGGTAAGAGATTTCCACATACTCTATCAAAGAGTAGAGGAAGTCCATAAACACATAGGAGTTAAAACAATAGTATTGGATGATCCGCTACCTCAGGATATTATGCTTAAATCCGAAGATGATCTCTCTATGGTTCAAGATCCCATTATGGGGGACAATGGTATTAGTGATTCTATTTTTGACCCAGAAGTGAAAGTTGAAGTACATGATTTAGATTTGTTACCGCAAATAGAAATACTAGAAACTGCAAATGTACCCGAAAGAAGTACCAGAACTAGTCGGCGGGGACGGCCTCCAGCAATggaacaaaatgcaaaaatatcgtcaaaacgtattaaaaaagaacaatcTCCTGCGGTGGATACGACTATTGATATTTTCGGGACAAATGCAGACCTCAAAAAAGATGAACTTAATATTTCAAGCACTTTGGAAGACGTAAGTAAGGTAAATTCCCATGATAAAGACGAagggaacaataaaaaaagagggAGGCCAAGAAAATCTGATGCTGAAAAAGCTAAAGTAAATATAACTCGTATAAAACGTtcaaagaaacatcaaccacTGCAGTTATCggaaactgaaattaaaaatgaaaaagatgcAGAAGATCACCCGTCGTGTTCATCTGTGCAACAGGCCTCCACCTCTACATCAGagccaaaaattaaaacagaaaacactgTAGAGGAACAGAACGCAAATGACCTCGCCGTTGCATCAGATAattttgatgatgatgatgcctATGCACAggatgattatgatgatgataACGATAACAACTATACTAAGGAGACCGATACATCATCGAATTCTGAATCAGAAGAAGATGAATCTGAAGGTTCAGAGTGGGGCGAGGCAAAAAAGAAGGGGGAAAAGTTTGCTGTTATTATGAAAAAGGAAAGAAATGTTCCCAAAAAATACAAGAAGAGAGAAAAACCTTCGGTGGAACCAAAACGCATGAGCCGCGAAGAAATTGAAGCTCGCCAAGCTCAACAGGCTGAATATGATTCCATCATTacaaaattctttgaaaaaatacgATGCCCTAAATGTGAACTTTTAGTTCATACGTTTGGAGAAATGCGGGCACACTTTCGTTTGGATCACAACGACGACCATGGATTTGTAGAATGTTGTGGTCGTCGGTTTGCCACTCGCAAATTTTTGGCCGAACACATATTAGTTCATTACAATCCTGACCATTTCAAATGCAAAACATGTGATAAAGTATGCCGCGATTCTACCCAATTGGAACTCCACGAACAAACCCATTTACCCAATCCACCACCGTCTAAATACAAGAAAACGTTCCAGTGTGAAAAGTGCTCAAAAACATTTTCCTCCAAAGCTTCTTTCGAACATCACATGGTAGCTAAACATGTACCCCGTGAAGAATTCAAATTTGAATGTCCTGAATGTAAGAAAAAATGTCCTACTGAAACTAAACTTAAAGATCACAAGCGCAGTGTACATGATCCACAGAGGACGGTGATATGTGATAAATgtggaaaaacatttaaaagtacCTACAGTCTTAAAAAACACCACGAACTGGAACATTCTGATATACCAAAACCGGCACCCATTCCTCAACAATGTGAAATCTGTGGTGCCTGGTTAAGACATTTGTCTGGTCTAAAACAGCACATGAAAAACATACACGAATCTGTGCAAACAGAACATCGTTGTCATATATGCAATAAAGTCTCGTCCACATCTAGAGCTCTCAAAAGACATATTTATCATAATCACGAATGTGTTAGAAAATTCCAGTGCACGATGTGTGATAAGGCATTCAAAAGGGCACAAGACTTAAGGGAACACACATCGGTCCACACAGGCGAAGTTTTATATACCTGTCCAAATTGTCCTatgacatttttttctaatgccAATATGTATAAACATCGCCAACGTTTACACCGTGCCGAATGGGAGGCAGATCGAAGTAAACCGATACCACCTAATATTATGAAACAAGCTAAACAGGGTAgcaaatttgtaaaaacaaaacGTTCTCCTAATGAGCCTACCCAATCGCAACTTATAACTCCAATGCCCATTATACCACCATCCGCGAATGCCCTGCATTCTGTTTTAAATCCTCAAATATTATATGCAAACATGACATTACAttga
Protein Sequence: MVVKCLLCLENPTTPGPKFLEIFGEEGLRLDISAIINKHFWLKTNRNCEDVEQICMTCWEVVRDFHILYQRVEEVHKHIGVKTIVLDDPLPQDIMLKSEDDLSMVQDPIMGDNGISDSIFDPEVKVEVHDLDLLPQIEILETANVPERSTRTSRRGRPPAMEQNAKISSKRIKKEQSPAVDTTIDIFGTNADLKKDELNISSTLEDVSKVNSHDKDEGNNKKRGRPRKSDAEKAKVNITRIKRSKKHQPLQLSETEIKNEKDAEDHPSCSSVQQASTSTSEPKIKTENTVEEQNANDLAVASDNFDDDDAYAQDDYDDDNDNNYTKETDTSSNSESEEDESEGSEWGEAKKKGEKFAVIMKKERNVPKKYKKREKPSVEPKRMSREEIEARQAQQAEYDSIITKFFEKIRCPKCELLVHTFGEMRAHFRLDHNDDHGFVECCGRRFATRKFLAEHILVHYNPDHFKCKTCDKVCRDSTQLELHEQTHLPNPPPSKYKKTFQCEKCSKTFSSKASFEHHMVAKHVPREEFKFECPECKKKCPTETKLKDHKRSVHDPQRTVICDKCGKTFKSTYSLKKHHELEHSDIPKPAPIPQQCEICGAWLRHLSGLKQHMKNIHESVQTEHRCHICNKVSSTSRALKRHIYHNHECVRKFQCTMCDKAFKRAQDLREHTSVHTGEVLYTCPNCPMTFFSNANMYKHRQRLHRAEWEADRSKPIPPNIMKQAKQGSKFVKTKRSPNEPTQSQLITPMPIIPPSANALHSVLNPQILYANMTLH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00742164;
90% Identity: -
80% Identity: -