Basic Information

Insect: Dexiosoma caninum
Gene Symbol: -
Assembly: GCA_963924685.1
Location: OZ004726.1:67123150-67126977[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00037 0.03 15.5 2.3 2 23 186 208 186 212 0.97

2 12 0.007 0.56 11.5 2.5 1 22 214 235 214 236 0.91

3 12 8.6e-05 0.0069 17.5 2.4 1 20 242 261 242 264 0.94

4 12 2.6e-05 0.0021 19.1 1.3 1 23 270 292 270 292 0.98

5 12 0.023 1.9 9.8 2.6 1 23 298 320 298 320 0.97

6 12 0.0006 0.048 14.8 0.8 2 23 428 450 428 450 0.96

7 12 9.9e-05 0.0079 17.3 0.9 1 23 456 478 456 478 0.99

8 12 2.9e-06 0.00023 22.1 2.7 3 23 502 522 500 522 0.96

9 12 0.26 21 6.6 4.0 1 23 528 550 528 550 0.89

10 12 5.9e-05 0.0048 18.0 0.1 1 23 555 577 555 577 0.99

11 12 0.018 1.5 10.2 8.5 1 23 583 605 583 605 0.97

12 12 0.053 4.3 8.7 7.4 1 23 611 634 611 634 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00037	0.03	15.5	2.3	2	23	186	208	186	212	0.97
2	12	0.007	0.56	11.5	2.5	1	22	214	235	214	236	0.91
3	12	8.6e-05	0.0069	17.5	2.4	1	20	242	261	242	264	0.94
4	12	2.6e-05	0.0021	19.1	1.3	1	23	270	292	270	292	0.98
5	12	0.023	1.9	9.8	2.6	1	23	298	320	298	320	0.97
6	12	0.0006	0.048	14.8	0.8	2	23	428	450	428	450	0.96
7	12	9.9e-05	0.0079	17.3	0.9	1	23	456	478	456	478	0.99
8	12	2.9e-06	0.00023	22.1	2.7	3	23	502	522	500	522	0.96
9	12	0.26	21	6.6	4.0	1	23	528	550	528	550	0.89
10	12	5.9e-05	0.0048	18.0	0.1	1	23	555	577	555	577	0.99
11	12	0.018	1.5	10.2	8.5	1	23	583	605	583	605	0.97
12	12	0.053	4.3	8.7	7.4	1	23	611	634	611	634	0.97

Sequence Information

Coding Sequence: atgGATTCCAAAATATGTTTGACGTGTCTTTGTAAACCCGCAAAAGCCcacaatataaatgaaattatattggAAAACCTCAATATACTAGAAACAATTCAGCAGTTAGTACCATTGCTTTTGGAACAAAAAGAATTTACTCTTCCTAATACAATTTGTGCTGAATGTTTGAAAAAACTCATTATGTCTTTCAACTTTCAAAAGCAGTGTTTGGATTCTATAAGAAAATTACGTAGACGATGGTCTGAAAAATTGTTGGATAAACAAAACGAACAAGAAGTGTCGCAACTGAAGTGTGAGGATATGGAATTTGAAtcgaataaattaaagactggTGATGAAAATACAGTTGAATCTCTCTCAGAAATACAGCAAAACGTAGAAATATCAGTTGAATTTAATTCCTTGTCTACTAATAAAGAAGACATCGTTATATTTGAAGAAAACCATGTGGAAAGTACTAAAGATGACTTAAATGACATTTTACAGTGTAACGAAAATAGcaacaaaaacgAAACATGTGAAGCATTTGAGATGCCCATAATTGCTCCCAGGCAATGTAAACTTTGCAGCAAAATATTCAAACAACCGCAAGGTTTAGCATCGCATAtgtcaaaaacacatttaaaaaaacacttatatCAATGCAGAAAATGTGATAAAGGTTTTAGTGTCGAAGAACTCTTTATACGACATTGCAATCTCCATTTAGGTATCAAACCTTTTCCATGCACCCAATGTGATAAAGCTTTTGATACTAGAAGTACCTTAAATCAACATTTACTTTGCCATTCTAAAGAGTCTTCTTATATATGTACTATTTGTGGCAAAAAATTTTACCGTATTGATGTTTACAAACAGCATATGCAACGCCACGACGACAAAGAACAATTTCAATGTTTGAAatgtgatataaattttaaatcgttCTCTGATCATATAAAACACATCAAAGCACACAAAACTCAAGGATCCCATGAGTgtaataatttcaacaaaaactttccaacatgcaatcaaaaaaataaaaatgcggaCATAAAACAATGTGATAAAGAtgaaaatgaaataatagaaATGCCATTAGAACAAATATTGACAGAATTTAAACCTGAAAGTAAGGATGAACCGGAAATTTCAATTCattcggaaaaaattaaaaataaggaaaaaaccGAAGTAAAAGTAGAAGAAAATACAAATCGaAAAGCAATAGATCATACGAAACACCAAAGATCAAATAGTGATCTACAAAATATGGAGATATCAAGTGAATCTGCTCAATGCGACCTATgtaatcaaatatttaaaaattctcaaggACTTGCCAGGCACAGATCTAGCacacattttaaaaagcacCTGTATCAATGCGATCAATGTGATAGAGGTTTTAGTGTAGAagaatattatattaaacatcGTAATCGTCATTTagcTTTCGAAACTAATAGCATTCTTAATCAACATTTAATATCACATTCTAAAGTAACACCACATTTATGTACAACTTGCGGGAAAAGTTTTCGTCGTCTGGACGGTTTAAGACAGCATATGTTACGTCACGGTGACGAAAGACCTTTTAAATGCTCAGTGTGTTCTAAAAGTTTCAAATGTCTTTCTGATAAATTGAAACACAGTCTTATACACGATGAGAAGCGGTATGAATGTAATATTTGTGGTTCACGTTTAGCCACTCCTGATTCTCTTTCACAACACCAAATGACGCATACGGGTGAAAAACCTTTTAAATGTACTCATTGCGAGAAATGCTTTATATCCTTGTCAAATATGAGATGCCACGAGAGAATACATACTGGTGAAAAGCCTTACAGGTGTCAATATTGTTGCAAATCATTTCGCCAAAGTAATGACCGTAAAAAACATACTAACCGTAtgcataaaaatgaaatgattaaTACGAAACCCGAGATCAATGGAGAAATTTTAGGAGGAAATCTATAA
Protein Sequence: MDSKICLTCLCKPAKAHNINEIILENLNILETIQQLVPLLLEQKEFTLPNTICAECLKKLIMSFNFQKQCLDSIRKLRRRWSEKLLDKQNEQEVSQLKCEDMEFESNKLKTGDENTVESLSEIQQNVEISVEFNSLSTNKEDIVIFEENHVESTKDDLNDILQCNENSNKNETCEAFEMPIIAPRQCKLCSKIFKQPQGLASHMSKTHLKKHLYQCRKCDKGFSVEELFIRHCNLHLGIKPFPCTQCDKAFDTRSTLNQHLLCHSKESSYICTICGKKFYRIDVYKQHMQRHDDKEQFQCLKCDINFKSFSDHIKHIKAHKTQGSHECNNFNKNFPTCNQKNKNADIKQCDKDENEIIEMPLEQILTEFKPESKDEPEISIHSEKIKNKEKTEVKVEENTNRKAIDHTKHQRSNSDLQNMEISSESAQCDLCNQIFKNSQGLARHRSSTHFKKHLYQCDQCDRGFSVEEYYIKHRNRHLAFETNSILNQHLISHSKVTPHLCTTCGKSFRRLDGLRQHMLRHGDERPFKCSVCSKSFKCLSDKLKHSLIHDEKRYECNICGSRLATPDSLSQHQMTHTGEKPFKCTHCEKCFISLSNMRCHERIHTGEKPYRCQYCCKSFRQSNDRKKHTNRMHKNEMINTKPEINGEILGGNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -