Dcan024558.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dexiosoma caninum
Gene Symbol
-
Assembly
GCA_963924685.1
Location
OZ004729.1:63048591-63053621[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 1.6 1.3e+02 4.1 0.7 1 23 267 290 267 290 0.92
2 13 0.013 1.1 10.6 1.2 2 23 369 391 368 391 0.95
3 13 8.8e-05 0.0071 17.5 0.8 1 23 728 750 728 750 0.99
4 13 0.0032 0.25 12.6 9.3 1 23 756 778 756 778 0.97
5 13 0.0011 0.088 14.0 1.7 1 23 786 808 786 808 0.98
6 13 7.5e-06 0.0006 20.8 1.0 1 23 814 837 814 837 0.97
7 13 0.54 44 5.5 1.2 1 23 976 998 976 998 0.97
8 13 0.0015 0.12 13.6 0.7 1 23 1004 1026 1004 1026 0.96
9 13 0.0072 0.58 11.4 6.9 1 23 1032 1054 1032 1054 0.98
10 13 8.6e-07 6.9e-05 23.8 0.1 1 23 1060 1082 1060 1082 0.99
11 13 0.0012 0.095 13.9 7.5 1 23 1088 1110 1088 1110 0.98
12 13 8.5e-05 0.0068 17.5 4.1 1 23 1118 1140 1118 1140 0.99
13 13 8.8e-05 0.007 17.5 0.2 1 23 1146 1169 1146 1169 0.97

Sequence Information

Coding Sequence
atgatcaACACTTTGCTAGAGCATGTGCCTATTAAAATGGAAGTTAAAGATATTGAGGAGGCTGTCGACAATCCAACGAATGATAATGTAAAAGATGATGATGACATTGATGAGacagatgacgatgatgatgatgaagatgagGAAGAGACTGATATTGAAAGCGAAGTTTTGGAAATTGAACAAGAAGCTACTATGTTAATTAGCAGCGATGAAGAAGCCGAATTGGAGGCACAAAGAATACGCTTTCCTCACAatcaaattacaaagaaattacGCGAAGATTCCAATAAATCTTCACGTAGCTCTTCCATTGATAGCCAAACAAGTAATACATCCTCTAATACTCATATTACCTatgaaataataactaaaaatttcacTACGGAGGAAAcagagaagaaacaaaaaatttcttcaccAAGTTTTAGGAATTTAGAGAACGCTAAAACTTTCGAGATCATTAATAAAgagaacaataacaacagcgaACAAGATATTTTGCAGAAGAAAATAGATAGCAAACAGTTGGAAAATAAATCCACCTCTGagaacaataaaaatgaaaatttaagctGCAAACTCCTGGACAATAATAAAACGGACAcccaaaaaaattcacaaactaAACCCAACATAGAAAATGCGGTGACAACTCCAGCTGATGTTACCGGACAACCAAGTCGCCGTACAAGTAATAATTCTGCCTGCAGTGTGGCTTCTTCTGTAGCCTCTGACAAAGCTGAAACGGAATCTTGTGGCAATATTTATGTCTTCAACTTGCGTCAAAAACTTATCTTTAATTGCgatttttgtgatttaaaataTGGAGCCTTGGACAATTTTGGACGACATCTTCATGAAGCTCATAAGGTTTTCAACTTAGATGAAGGTGCGGAAAAAGAAAATGCACCACGTAATTTAACCAAAACTAACCGTATAACTAATAACGCAGCGAAAAATTCTGCTAACGTCAAGAAAGAACCTTTGCAGTGTTTGGAGTTACTGGCCGAACCACCTGTTGCTCTGCCGCCTTCCGTTTTGGCAGAGCCTCTAGATTCTTGCGGCAATGTTTTTATGCTCAATCATCGCAGATTGTTTTTGGTTTGTGGTTATTGTGAGTGCAAATATGCCAATTTggatttatttgaaaagcatTTAAGGCAACAGCATCGCATTTTTGAGGGGTCTCGTAATGAACTGAATGTAGTGCCTAAAGTAGAGGTGAAAGAAGAGGTATATATTATAACCGAAGTAGCAGATAAAACagataaaaatgtaattgcTGCTCCTCACGCTATGGTGAGCATACCCGCAGAGATTCCTTTAAATATAAGTAATAACTCAGAAGACAATAACGACACAGCGGTTGTTGTAGAGGAGCCGCCAGTGGAAAGTAGTGTTAACGAAGAATTGGCACCTCCTAccgctttaataaaaaatgtactggATTCCAAAGAGACTAAGGAACTGCAAAGTTCAGTGCAAACTAAAGTAATTCCAGATACCAAGTTAGAGGTGCAAGCTTCACCAGATGTAAATAAGGAAAAATGTGTACCGGAAAAAGTTGTGGATACTGAAATATTAGCGTCTAATATATCTGTTCATAGTGTGGAACCAATGGAACAGCAAATTGtgaataatgaaattttgcTACCTAAGCAAACCAGAAGTAGTAGACGTTCTTCTCCTGCTGTACCATTAACAAGGCacaataaaatatgcaaaagaagCACGCGAACTATCACCACAGTTAGGAGAgagTCTACTACCATCAAAAAAGAAGTTAAAATGGTCGAAAAAGCTCCCGAAACTGCACAAATTATACAAACGGAAGAAGTTGCAGAAGTTCCAATAAAACAAACTAAAGCTACCAAAAAGTCCACAAAAACTGCAGAGCCAATGAAAGCGACTATTGCAGAGAAAACAGAAGAAACAAGAGAAACGAAAAAATCCACCAAACATGCGAAATCATTAAAAGCCAATCAAACGAAAAGTACAACAACTCAAGAAACTGAAGAAAGTGAAAATGCAACTAAATCCACGGAGTCTAAAAAgcgaaaatttcaagaaaatatagTAGCAGCTAAAGATcctgaaaaaaatacaaaacctcCTACCCAAATCAAAAAACTGAAACAAGAAAGGCCAGAAATTGAAGAAGACTCtaacgaaaataaattcaagtgTTCAATCTGCTCCAAGGAACTGGCAAGCAAATACTCTTTGAACATTCATGAACGCACTCACACCGGAGAAAAGCCCTATGAATGCGATATTTGTCGCAAATGTTTCGGCAGCAGATCAAACCTCTGTCATCATAAAAAATTCCACATGGATGAATctcacaaaaaatataaatgtgagATTTGTGACATGAAGTTCTTTCACGGCACTGATCTTAAGATACACACTGCCACACACTCCTGCgagaaaaagtttaaatgtgACATCTGTTCGCGTGACTATTCCTCTAAGAGCAGTTTACAAAAACATATTGAGAGAGAACATAAGCCtgatgaagaagaagaagaacccagaaataggaaaaagaaaataactcgAAAACAAATTGCTCCAAGTCCAAAAGTGGAACTAGAAATAGAACCGCAATTATCCACAGTCACATCTTCCATAATTGAGCCAATGACCAAAATGCTGCTGCCGGCAGAAAAAACTGCAATGGATGATCTGAGTACGGATCCTGTTGATGATATTATTGAACAATTACAGAATGAAATGGCACAAAACGAATTAAGAACCAGTGAAGTGAACGCAGTAACTTACACGATTAAATCTATTCTACCCGAAAGTGAAGTTGCGAATAAATCTTCGGAAAGTAATTCAATAGTCTCTAACACTCCACACGACGAAATTAAGAGCACAGCGAAAACTAAACCCAcacttttgaaaattgttaaacGTTTCTTCTGCGATGTATGCCCTAGTGGTTTTGACAAGCACACCAGACTTGTCGAACATAAGCGTGTGCATACGGGCGAAAGACCTTTTGCATGTGACGAATGCGGCAAACAGTTTCGAGTACGTATAAGATTAAAAGAACACAAACTACGACATtccaaagaaaagaaattcaaatgtGAAATCTGTCAATTGGGTTGTTGCACCAAACAGGATCTTAATTTACACATGCGTCATCATACAAACGACCGCCGTTATCAGTGCGTCATGTGTCCCAAAGCTTTTGTGCGCAGCTCCGACTTAAAAATCCATGTGCGCGTACATACCGGAGAAAAGCCCTACGTATGTGATATCTGCCACAAATGTTTTCGGGCAAACCAAAATCTGTGCGTGCACAAAAAATCCCATATGGGGGAGGCGTCAAAAACTTACAAATGTGAACATTGTGACAAAAAGTTTATGCGCAATATCGATCGCAAAGTGCATATGAGATCACATACGGGTGAAAAACCCTACAAATGCGAAATTTGCCAACGCGGCTACTCATCGAAAGTAAATGTTCGAGCTCATATTGAAAGGGATCATATATCCACTAATGGTGGAGGAAAACCTCCAAAAGGTAAAAAGAAACCAGGACCAAAACCGCGGGCCTTAAGGGAAGAGCTAGAAAAGCAAAGGAAACTGATACAGGAGCTACAAAATCAACTTTGGCAGCAAATTAAAACAGACGAAAAGATCATACCATCCGATGAAGAGAtgctacaacaacagcaaaatgtACAAGACACTACAACTACAACAGTCGCCACCTCGCCTCTCAGTACAACATGTGATATTACTGACCCCATACAAAGTGCTTATGAATTGCTGAACAAATTGAAATCATCAACAGCTACCTCGAAACCTTTAACAGTAATACCATCGCCACCTCCTATGGCTGATCTACCGTCCAATCCCTTTACAAAGCCCAATAAAGACTCAACAACTTTACTACCTCTTACTATAACACAAAAGCTAGAACAAGCTTCACCAACACCAGCACCCTCCTCAACTTCATCGTCATCAGCTTCTGCTTCATGTCATAGCACACCTTCACCTCCCAAGGCCACAACAACAGCCACGAAGGTTGTGTCACAGAAGACCTCTTTAGGTATACAACAAGTATCGGTGACCGTGTCGATGCAAGTGGAAAACGTTACTGCCACTCCTGTCATACCAGAAAAGGACAATGCAATCGCTAGCAGTACGAATAGTAgtgttaaaaaagaaagaaaaattacaagttATTTTACGGTTGTGGGCCAAAAGGCAGAAGTTTAA
Protein Sequence
MINTLLEHVPIKMEVKDIEEAVDNPTNDNVKDDDDIDETDDDDDDEDEEETDIESEVLEIEQEATMLISSDEEAELEAQRIRFPHNQITKKLREDSNKSSRSSSIDSQTSNTSSNTHITYEIITKNFTTEETEKKQKISSPSFRNLENAKTFEIINKENNNNSEQDILQKKIDSKQLENKSTSENNKNENLSCKLLDNNKTDTQKNSQTKPNIENAVTTPADVTGQPSRRTSNNSACSVASSVASDKAETESCGNIYVFNLRQKLIFNCDFCDLKYGALDNFGRHLHEAHKVFNLDEGAEKENAPRNLTKTNRITNNAAKNSANVKKEPLQCLELLAEPPVALPPSVLAEPLDSCGNVFMLNHRRLFLVCGYCECKYANLDLFEKHLRQQHRIFEGSRNELNVVPKVEVKEEVYIITEVADKTDKNVIAAPHAMVSIPAEIPLNISNNSEDNNDTAVVVEEPPVESSVNEELAPPTALIKNVLDSKETKELQSSVQTKVIPDTKLEVQASPDVNKEKCVPEKVVDTEILASNISVHSVEPMEQQIVNNEILLPKQTRSSRRSSPAVPLTRHNKICKRSTRTITTVRRESTTIKKEVKMVEKAPETAQIIQTEEVAEVPIKQTKATKKSTKTAEPMKATIAEKTEETRETKKSTKHAKSLKANQTKSTTTQETEESENATKSTESKKRKFQENIVAAKDPEKNTKPPTQIKKLKQERPEIEEDSNENKFKCSICSKELASKYSLNIHERTHTGEKPYECDICRKCFGSRSNLCHHKKFHMDESHKKYKCEICDMKFFHGTDLKIHTATHSCEKKFKCDICSRDYSSKSSLQKHIEREHKPDEEEEEPRNRKKKITRKQIAPSPKVELEIEPQLSTVTSSIIEPMTKMLLPAEKTAMDDLSTDPVDDIIEQLQNEMAQNELRTSEVNAVTYTIKSILPESEVANKSSESNSIVSNTPHDEIKSTAKTKPTLLKIVKRFFCDVCPSGFDKHTRLVEHKRVHTGERPFACDECGKQFRVRIRLKEHKLRHSKEKKFKCEICQLGCCTKQDLNLHMRHHTNDRRYQCVMCPKAFVRSSDLKIHVRVHTGEKPYVCDICHKCFRANQNLCVHKKSHMGEASKTYKCEHCDKKFMRNIDRKVHMRSHTGEKPYKCEICQRGYSSKVNVRAHIERDHISTNGGGKPPKGKKKPGPKPRALREELEKQRKLIQELQNQLWQQIKTDEKIIPSDEEMLQQQQNVQDTTTTTVATSPLSTTCDITDPIQSAYELLNKLKSSTATSKPLTVIPSPPPMADLPSNPFTKPNKDSTTLLPLTITQKLEQASPTPAPSSTSSSSASASCHSTPSPPKATTTATKVVSQKTSLGIQQVSVTVSMQVENVTATPVIPEKDNAIASSTNSSVKKERKITSYFTVVGQKAEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-