Dcan010235.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dexiosoma caninum
Gene Symbol
-
Assembly
GCA_963924685.1
Location
OZ004726.1:67128785-67131312[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.00019 0.015 16.4 4.7 1 23 178 200 178 200 0.97
2 15 0.00041 0.033 15.3 1.9 1 20 206 225 206 226 0.93
3 15 0.5 40 5.6 4.8 1 20 286 305 286 307 0.94
4 15 0.00044 0.035 15.3 3.5 2 23 317 339 316 339 0.96
5 15 0.00011 0.0092 17.1 2.0 1 23 408 430 408 430 0.98
6 15 0.0052 0.42 11.9 3.2 1 23 436 458 436 459 0.95
7 15 0.012 0.97 10.7 0.6 1 23 480 503 480 503 0.96
8 15 3.8e-05 0.003 18.6 2.5 1 23 509 531 509 531 0.98
9 15 2.1e-06 0.00017 22.6 2.4 1 23 537 559 537 559 0.99
10 15 1.3e-07 1e-05 26.4 1.8 1 23 565 587 565 587 0.96
11 15 0.0083 0.66 11.3 4.1 1 23 593 615 593 615 0.97
12 15 0.00098 0.079 14.2 2.2 1 23 621 643 621 643 0.96
13 15 6.6e-07 5.3e-05 24.2 0.4 1 23 649 671 649 671 0.99
14 15 1.6e-06 0.00012 23.0 1.7 1 23 677 699 677 699 0.99
15 15 0.0087 0.7 11.2 0.1 1 19 705 723 705 724 0.97

Sequence Information

Coding Sequence
ATGCTAATACAAGAAATATACGGTCGGGTGTGTCGAGTGTGTATGTGTAAATCGAATAATTTGCATGATTTAAACGAGACAACTGAAGAGTGCCTCACCATGAACGATATGTTATCAAAGACAGTGTCCGGCATACATGCCAATATCGAATTTCCAGTGCCTCAAGAAATTTGTGATTTATGTATGGAGCATTTACAGATTTCTTTTAGATTTCAACAGCTTTGTCTGAACACTAATGAGCAAATGTTGAAAATCTGGGAACAGTCCCAAAAAGCGGAAGTCAAACAGCAAACGTTAATAAGTGAGGTGGAGAATGAAGAAGAACCAGATCCCATCAAAGTAGAATATGATATTGAAGAAGAGCAAAAGTATGATAATGTAGGCGAATTTGCagattttgaaaatgttgaaaattctaGTAAATGGGAAAATGACACGGGCGATGAAACGTTTGACAAAGATAAATTGGCTTTGCAAGAAAATTCACTACAATCTACTGCTACATTATCGAGTCGAGGATCATTAGGTCGTTTCGCATGTCTGGAATGTAAGGAGACTTTTACAAAACATTCCCAACTAAAAAGGCATCGCAGTAAGCATGAGTCATCTCATCCCTTCGATTGTCGCAAGTGTTCACAACGTTTCAAAACGAAAAGTTTATTGCAGAGACATGCGAAGTGTTGcaaaaaaggtaaaataaaactgtttattaaaaaagataatgAGGATGATGACGACGAGGATATGCCCCTTagcgctttaaaaaaaatagaaactgaAAATGATAGCGACGTGTCAAAGGAGaacgataaaaagaaaagaaaaattgttaaaaccgTTAATAACAAAACACCTTATTATTGCACCAAATGTGACAGTTATTTTAAATACGGTTATCAGCTTACAAAACACAGCTGCAGTGATGATGATACCGGctcgtattttaaaaaatgtgaaaagtgCAACAAGACTTTTACTACAGAAAACATACTGCAAAAGCATATGAAAAATAAGCATAAACACGATAAAACGACAGAAAGAAGAAAAGTTGCAAATAGCGATGATGAAGGTCGGGTTGAAGAAATGGACAATCAACCCAATGAGACTGACGGTAATATACATGACATAAATAATGACGATTCATCGGCTGAAAGCGATTCTGATTATGTAGAGAAAGACAAAAGcatagcaaaattaaaaatagaaccaGTTACAAATCAATTCCCTTGTAATGAATGCGACGCTTCTTTTAGATTTGAAAAGCAACGCACGCGTCATATGAAGAAGCATACGGAAGCGCATCGCTTTGTTTGTGCTTTGTGTTGGGATCGATTCAAGTATCCACATATGCTACAGAAGCATATGGAAAAACATCATCCGGAAGAGAATCCCAATCCTAAGGCTGCAGAGACAAAACCAGAAAATGTTGAAAAGACGCACGTCTGTAGTTACTGTTCATCGGCTTATTCGAACGTTGGCGGTTTGGCACAGCATATGAGTAAGAAACATCCAGAAATTAAACCATTTAAGTGTGACAAGTGCGAAAAAACTTTTGTAGTGgaagaacatttaaaaatacatacaaatcgtcacatgggtattaaaaactttaaatgtgAACTTTGTGATAAATcattttcatttaaatttgctaTGAAGCAACATATGCGAATACATACGGgagatttaaattatttgtgcaCACTATGTGGTAAGAAATTTTATAGACCTAGTAATTTGCGTCAGCATATGCAACGTCATGGTGATGATAAACCTTATACATGTCCTCACTGCCCAAAACGTTTTAAATGCCCTTCGGACCGTTACATTCATTTGATGTCGCATCAAGAGGGTAAAAATCATGTATGCCAGACTTGTGGCGCAAGGTTTTCGCGGGTGGATACTTTACATCAGCATCAAATACTTCACACAGGAGAGAAACGCTATAAATGCGATCAATGTCCAATGGCATTTCCCCGTTTGATGAATTTGAATCGGCATTTGCGCACTCACACTGGTGAAAAGccatataaatgtaaattttgtgaGAAAGCTTATGCACAAAGTAATGACTTGAATAAACATTTACGCACACATGTAGGTGAAAATACCTACATGTGTACTCAGTGTCCGGCTGCTTATAAATATCAAGCTGACTTAAGGAATCATGAATGGGAACACTATCGCCTTCAAAAGGAAGCAGAACAGAAAGCTAAAGAAGAAGCATCtgcattaaaaatgaaagatGAACAAACCGCAATGGAAGTAAATgtatag
Protein Sequence
MLIQEIYGRVCRVCMCKSNNLHDLNETTEECLTMNDMLSKTVSGIHANIEFPVPQEICDLCMEHLQISFRFQQLCLNTNEQMLKIWEQSQKAEVKQQTLISEVENEEEPDPIKVEYDIEEEQKYDNVGEFADFENVENSSKWENDTGDETFDKDKLALQENSLQSTATLSSRGSLGRFACLECKETFTKHSQLKRHRSKHESSHPFDCRKCSQRFKTKSLLQRHAKCCKKGKIKLFIKKDNEDDDDEDMPLSALKKIETENDSDVSKENDKKKRKIVKTVNNKTPYYCTKCDSYFKYGYQLTKHSCSDDDTGSYFKKCEKCNKTFTTENILQKHMKNKHKHDKTTERRKVANSDDEGRVEEMDNQPNETDGNIHDINNDDSSAESDSDYVEKDKSIAKLKIEPVTNQFPCNECDASFRFEKQRTRHMKKHTEAHRFVCALCWDRFKYPHMLQKHMEKHHPEENPNPKAAETKPENVEKTHVCSYCSSAYSNVGGLAQHMSKKHPEIKPFKCDKCEKTFVVEEHLKIHTNRHMGIKNFKCELCDKSFSFKFAMKQHMRIHTGDLNYLCTLCGKKFYRPSNLRQHMQRHGDDKPYTCPHCPKRFKCPSDRYIHLMSHQEGKNHVCQTCGARFSRVDTLHQHQILHTGEKRYKCDQCPMAFPRLMNLNRHLRTHTGEKPYKCKFCEKAYAQSNDLNKHLRTHVGENTYMCTQCPAAYKYQADLRNHEWEHYRLQKEAEQKAKEEASALKMKDEQTAMEVNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01259363;
90% Identity
-
80% Identity
-