Basic Information

Gene Symbol
TRERF1_1
Assembly
GCA_963924685.1
Location
OZ004725.1:79015616-79038049[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.2e-10 1.7e-07 32.0 0.2 3 45 1333 1375 1333 1376 0.94

Sequence Information

Coding Sequence
ATGacacacagaaataaaaaaccatacGAATGTAAAGCTGATGGCTGTGGCAAATCGTATTGTGATGCTCGTTCATTAAGAAGACATACAGAAAATCATCACGCCGGTATTATAACACCGCACAATCAGCAACTCacaatatcgaataataattcCAATTCAAATTTAAGTTTATCCCCAGCAACGGCGAACGGAGACGCCAGTTCACCTGATGGTGCCACATGCTTAGGAACATATCTATCCAACGGCGCTACAGTAGTCGATGCAGCTACCGGCTTAGCTTTAACCGAGGAAGAATTGAAAGCTTTAAATGTACCCCTTAAGACAGGTGTAACTTTATTATCGCCCACATCGACCACATCCTCAGTATCCTCTTCGAGCAGTATGTCGAACAGTGCCGGAGCAACCATCACACTAACCGACAATAGTGGCAATATCGAAGGTGAAGGCCTCACGCGAGAACAATTGGACTTGATAAGCAAAATAATGAGACAAACTAAACAGACCACAGCTCAAGTGACGGTATCTTCACCAACCAGTAGTCAGTCGTACAAAATAGACACCAACCCCCAAGCAACGTCTCAAACACAAACTCAAAATTCCCGACCCAGAACCTGGAATATGCAATTGCTGAATTCCTCTCAAAACGTTGCCATCACGGTTGATGATGCCATCAATGCGGATAATACCAACGATTTATGCAGCAAAACTCCAACAAACATTAAAGAggatgaaattgaaattgatttatcCAATGCTATTAATTCCAATCTGTTCAATTTAGTGAAAATTGATCAAAAACCTGTAGAGTGTAATTTATGTCAtcgcaaatttaaaaatgtacccGCCCTTAATGGCCACATGCGTTTACACGGTGGTTATTTTAAAAAGGATCCCGAAACGaagaaaagtgaaaagaaaGAGAACAGCGGACCTCCCCTGCAGACGGCTAGTATTGGTGTCAGAGCCTTGATTGAAGAGAAGATAATTAGTAAACGAAGTAAAGATTTAAATAAGGGTGCTTTTGTAGTCCCTGCTCCGCCCTCAAATAGTACACAAAATAATACGACAACCATTCGCCGATCCATTAGTGATTTGGATAGTTTTCTTAATCCTAAAACACAAACGAACAGTACAACTACAATGAATCAACAAAATTCcgcacaacaacaatatcagcaaCAATTACCAGCGATTACAACTATTAAACCCAATCAAAAGTCCAACATGAATGTGATGCAGGATATAAACTTGCCACAAAGTATCGAAATCTACAGTACCAAACAGCAACAAAAGACAATGAATAACATTGGAGTGGGTACCACAACCACAACCACCTCCCTAAATGCCGAACGTAGTGCAACGAAAACAACTACATCGACAGCAGCAGCAACGATTAATACAACGACAACGCGAAGTACGTCAACCGATCCCAAAGATTCGACTTTGATTGAATTACTAAAGCGCGGTACTCGCATAGCTGTTACCCAAAAGCAGCCAAACAACAACACACCTCTGGGCGGAGTTACCCGGCAAATAATAACGAACAAAAATAATTGCAGTGTCATCATACCCTCCGAAGTCCAGGTCGTCTCCACCAAGGCAAAAGTCAAAAAAGACGAGAGTATACAGATGTCGAATGCCACAAATGTCACCCTGCCAGATGGCACTCCTTTGTCTCTAACTATTGCCCAAGGAGCTGATAGCAATAGCGAGGTGTACACGGTCACCTACACTAGTGATGGCTCCACGTTATTTAGTGAGAATGAAGTTTACAATGTCAGTGAAGCCGAAATGCTACTGCAAACCGTGGACACTATGCAATTGTTGAGTGGCGCAGGCGGAGCCAATCTAAAATCTGAACATTCCGAACAATTTGAGGTAATGGATAGTAAAATTAAACTGGAAATTGAGCAACAAAATTGTGTGAACCACGATCAGCAGCTGCAACAGCAGCAGCTGCAGCAACAACACCAGCAGCAATCACTGCAACAAAACTCAAATCAAACTACTCAAACTTTACCAAACTTCCAACATTTTCATTCCAAAGAATTAATCATTCAAAATCCAGCGTTAATCAACCAGCAGCATATAAGAAGCAACAGCTTGTCTTTGCCTCAAGACATAAAAAATCAATTCTCGTCCAACCTGAATTCGCCCATACATTCTCCTCTAGCTTATCCAACGCCCCCTTCCAGCCATGAAAACGTCACGCAAACATCGCCCTACATAGAAGACAATCACCACTTCAATGACACGCAGAACATCTTCTTCAGTGAGTCCCTGATATCTTCCAACAATTCGAGAGAAACGGAAAAtgacaaaataatgaaattgaaaagtgTGCTTGAAGATAATTCGTTCGATTCGAATATAAAAGTCGAAGATTTGCTTAACGGGACCGACACCGATGCGGAATGTGATTTACGTGAATTCGCCGAGGCGAGCTTATCCTTTCTCGACGATGATCAAGAGTTTCTAAATGATTCTCGTAATGCGACCTCTCCGCTCTCCGAATCGTTTTTTACCAGTGGTATAGGCACAGCCGAAGAGGTTAAAGAAGTTCTACGAGAAGTTTTAACGGACGATCAGCTAAACTTGAATTGCGAAAATCAAGGCGAAAATATAATTGACTTGTATTATTTGCCTGGCTTCAGTTTACAATCGCAAATGATGTCCAACTCTGAAGATCCTCTATTGTCTTCGTCACCTCGAGATTTTGGACAGCAaccgaaacttcaaaattcacTACAGTCCCAACAaccgcaacaacaacagcaacagcagcaatcACAAACTGCATCGCAACAGATGCAGCAACAGCAACTGCAACAGCCACAACAAATCCAACACATTcctcaacagcaacagcaacagcagcatcaTATGCAATACGACAAtatacagcagcagcagcagcagcagttgcaGTGCCAAACAATGAAAATATCGCTAGATTCGAGAGCACAAATTTCTGCGTCAGCTCCTTCAGATATTAACCAACTGATTCTGAATATACCTTCAGCAACTTCCTGCTCTTCAAGTACTGCTGCGATACACTACAATGTGGAAAACTTCTCACAAGTACAAATCCAACCTATGCAACAGCAACAGCCGCAACAAAATCAGTCGAACTCACATTCACAGTTGCAACAACAGCAAACGCAGTTTCTGACATCCACCAACATCAACTCACTCAACGAGGCCTTATTGCAGCCTATAATCTACACCAGTGGTACCACCGACAAAATGGAACTAAAATTAGACAACAGCCCCAACTCAAGTACCccacaaatacaaaatattatgaacCTGAATAAACCCGTGGAGGCTGTAAAGAATACAACAACCAGCAGCAATGTTATGCTCTCGCAGCAAAGTCACTCCTCGAACCCCAATTGTTTGCAGCCGCTGTCGAATCAAACAAACTCCATATTGAAGAGACGTCTGAAGGGGCACTCCTTTTTTGATGTCACCACTTCAAATTCCTATTCCAAATATCAAGCACTGACCCCCTACAAATCAAAACTTCGCAAGCCTTCGCGTACCCACTTTACGCCAGCTCCCATCCTAAATCCCGAACGTAAAGGCCATGGATTATACTGCAACGTTCTAAAACAACTGGGTTGTTCGCTAATGACCTTTGACAATTTTGATGACGATTTCGATGATCCGGTGGGTTTGGTCGACTTCTCCGACGAATCGAAAGTCAATCTCGGTTCTGCTTATCAAGCTGCTATACCTGCATTTAATGACAACTCTACATGGTCCAGTGCGCTTGCAGACGAAACGCTCTGTTCTGATCTCATGTGGGATCCACAAATTCAAAAGGATGAAAAGATTTTGATGAGATTTATCGATTTAAGTAAATCATCGGCCGTTCCTCTAGGCAGTCATTCTGAAGAGGTTGCTCTGGAAGCCCTGCTAAAGGCTCATGGCAACACCGCTACGGCTGTTTTAAGTCTATTGCAAACCCAATCGAACTCATTCCAAATAAAATGGTCGTCCTCAGAGCTGGAGATATTCCTAAAAGGTCTAGAGAAGCACGGGAAAGAGTTTAGTAAAATATCCAGAGAGCTCGGTTCAAAGACAACCGGAGAATGTGTACAAATGTAttacttttggaaaaaattatgtgtGGACTACAAGGTAACCCACCTAAAAACCGAAACACCGCCACAAAATCATGCCAATGATCCGAAGCCTTATGTATGCGAAATACCAGATTGTTCAGCGAGTTTTTCTTCAAAAGCTGCTCTGCATGGACACACTCGCATTCATACTTATGGCCGCAATACCCACAATAGTCAAcacagtaacaacaacaacgccAATGCAACTACAACAGCTACTAATAGCACTGTAAATTCCTCGCAAGGCTCCTCTACCAGTAGCAATAATCATCCCATGCATAATAATACCCAATCTAGTCATAACAACCCGGCGAATCCTCCAAACCAAAAAGATACAAATGCCAATAAAGACAATACCGAATTCCCCTGCAAGGTGTGCGGCAAagtattcaataaaattaagagCCGTAGTGCCCATATGAAGACCCATCGTGCAACAGATAATGAAACAACTGTACAAACTATTAataatcaaaatcaaataatacaacaacaacaacaacagcagcagcagcaacaagcACAGcacttataa
Protein Sequence
MTHRNKKPYECKADGCGKSYCDARSLRRHTENHHAGIITPHNQQLTISNNNSNSNLSLSPATANGDASSPDGATCLGTYLSNGATVVDAATGLALTEEELKALNVPLKTGVTLLSPTSTTSSVSSSSSMSNSAGATITLTDNSGNIEGEGLTREQLDLISKIMRQTKQTTAQVTVSSPTSSQSYKIDTNPQATSQTQTQNSRPRTWNMQLLNSSQNVAITVDDAINADNTNDLCSKTPTNIKEDEIEIDLSNAINSNLFNLVKIDQKPVECNLCHRKFKNVPALNGHMRLHGGYFKKDPETKKSEKKENSGPPLQTASIGVRALIEEKIISKRSKDLNKGAFVVPAPPSNSTQNNTTTIRRSISDLDSFLNPKTQTNSTTTMNQQNSAQQQYQQQLPAITTIKPNQKSNMNVMQDINLPQSIEIYSTKQQQKTMNNIGVGTTTTTTSLNAERSATKTTTSTAAATINTTTTRSTSTDPKDSTLIELLKRGTRIAVTQKQPNNNTPLGGVTRQIITNKNNCSVIIPSEVQVVSTKAKVKKDESIQMSNATNVTLPDGTPLSLTIAQGADSNSEVYTVTYTSDGSTLFSENEVYNVSEAEMLLQTVDTMQLLSGAGGANLKSEHSEQFEVMDSKIKLEIEQQNCVNHDQQLQQQQLQQQHQQQSLQQNSNQTTQTLPNFQHFHSKELIIQNPALINQQHIRSNSLSLPQDIKNQFSSNLNSPIHSPLAYPTPPSSHENVTQTSPYIEDNHHFNDTQNIFFSESLISSNNSRETENDKIMKLKSVLEDNSFDSNIKVEDLLNGTDTDAECDLREFAEASLSFLDDDQEFLNDSRNATSPLSESFFTSGIGTAEEVKEVLREVLTDDQLNLNCENQGENIIDLYYLPGFSLQSQMMSNSEDPLLSSSPRDFGQQPKLQNSLQSQQPQQQQQQQQSQTASQQMQQQQLQQPQQIQHIPQQQQQQQHHMQYDNIQQQQQQQLQCQTMKISLDSRAQISASAPSDINQLILNIPSATSCSSSTAAIHYNVENFSQVQIQPMQQQQPQQNQSNSHSQLQQQQTQFLTSTNINSLNEALLQPIIYTSGTTDKMELKLDNSPNSSTPQIQNIMNLNKPVEAVKNTTTSSNVMLSQQSHSSNPNCLQPLSNQTNSILKRRLKGHSFFDVTTSNSYSKYQALTPYKSKLRKPSRTHFTPAPILNPERKGHGLYCNVLKQLGCSLMTFDNFDDDFDDPVGLVDFSDESKVNLGSAYQAAIPAFNDNSTWSSALADETLCSDLMWDPQIQKDEKILMRFIDLSKSSAVPLGSHSEEVALEALLKAHGNTATAVLSLLQTQSNSFQIKWSSSELEIFLKGLEKHGKEFSKISRELGSKTTGECVQMYYFWKKLCVDYKVTHLKTETPPQNHANDPKPYVCEIPDCSASFSSKAALHGHTRIHTYGRNTHNSQHSNNNNANATTTATNSTVNSSQGSSTSSNNHPMHNNTQSSHNNPANPPNQKDTNANKDNTEFPCKVCGKVFNKIKSRSAHMKTHRATDNETTVQTINNQNQIIQQQQQQQQQQQAQHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01374452;
90% Identity
iTF_00436049;
80% Identity
iTF_00436049;