Dcan000679.1
Basic Information
- Insect
- Dexiosoma caninum
- Gene Symbol
- -
- Assembly
- GCA_963924685.1
- Location
- OZ004725.1:14988938-14989387[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.9e-10 1.3e-06 28.7 0.0 5 35 1 31 1 37 0.93
Sequence Information
- Coding Sequence
- ATGAGAAGAGCCATACAGGTTGTTCGAGATGGTGAAATGGGTATTCTCTTGGCATCAAAAACATTTGGTGTACCCCATACAACTTTGCAACGGAATGCAAGAAGTGATAAAACCATTGAAGAACTTTTGGGAAGTAAGCTTGGTCGACCCCCAACATTGACTGCGAATATGGAAAATGAGTTGGTTCAGTATATATTGGAAATGGAGTCACGATATTGGGGACTAACAAGGGCTGATATACGATCGTTATGTTTTCAAATTGCCACAATCAACAAAATTCCCAACAAGTTCTCTATAATGAAAGAATGCGCTGGAAGATACTGGTTAAACGGTTTTATTAACCGTCATCGAAGCGTTTTAAGCTTTAGAAAACCAAGTGGGACCAGCGCAGACTGTGCTCGACGTTTCTCTAGAGAAAATGttgacacattttttaatttgctattctaa
- Protein Sequence
- MRRAIQVVRDGEMGILLASKTFGVPHTTLQRNARSDKTIEELLGSKLGRPPTLTANMENELVQYILEMESRYWGLTRADIRSLCFQIATINKIPNKFSIMKECAGRYWLNGFINRHRSVLSFRKPSGTSADCARRFSRENVDTFFNLLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01175000;
- 90% Identity
- -
- 80% Identity
- -