Dcan022204.1
Basic Information
- Insect
- Dexiosoma caninum
- Gene Symbol
- ttk
- Assembly
- GCA_963924685.1
- Location
- OZ004729.1:18319060-18324532[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-19 7.1e-16 58.4 0.0 2 45 560 604 559 604 0.97 2 2 6.8 1.1e+04 -3.1 0.7 3 11 637 645 637 648 0.82
Sequence Information
- Coding Sequence
- ATGTCGgtgcaacaattttgtttacGCTGGAATAATCATCAACCAAATTTCATCTCAGTCTGCTCTTCTCTACTGCATAATGGCACTTTGGTTGATGTCACACTGGCTGCAGAGGGGAGACAACTACAAGCtcacaaaattgttttatcagcGTGCAGTTCGTATTTTCagacACTGTTTACAACTAATCCATGTCAACACCCAATCGTAATATTAAAAGATGTGCAGTATGATGATCTTAAGACAATGGTGGACTTCATGTACTATGGAGAGGTGAATGTGTCACAAGAACAACTGCCGCATATATTAAAAACGGCAGAAATGCTTAAAATTAAAGGTCTAGCAGAAATGCCCACCGATCCCGCCAACTTAACAAAATCTGATAGCAAATCATCGAATGATGCCACAGAATTGGTTGGTGGGGGTAATAATGGCCAGTTAGGTGGTAATAGTAGTGGCGGCGGTAGTTGTGCAGGTGGTGGTGGAAATACAAGTACTGGCGGCATGGGTAGTAGTGGAGGCGGCAGTGTTAGCGACTCAATATGGGGTAGTACTGAATCACAAtttcaacagcagcaacagcatcagcaacaacagcaacatcatcaacaattacaacaacagcagcaacatcatcatcaacaacagcagcagcaacaacaattgcaTGCACAGTTACAGAATAGTCAAACACAGACCtcacaacagcagcaacaacaacatcatcaacAACAACTACGACGCACACCATCTCCTTTAGCTGCTGGCACCTCACCAGCAACTAGACGAAAACGTTTGAGGAAATCTTCAAACAATGGCTCTGGTGAAAGAACAAATTCTGAAGATCATAATACATCTCTAGATGCCGCCACAGCTGGTGGTCTGACTTTATCACAAATGAGTCAGATGTCATTCAGTGGTGCGGCTGCAAACAGTGCTCTAAGTGGTTTAACAGCACACTCCTTGCACACAGCTAAATTACTTAAAGAAGCCGCTAATAACGACTTGGAAACAAATCCCCAAGATTCAGATAGTTTAGATGAACCACATGGACATGTACATAtgcaaattAAACCAGAAGTTGATATGAGCGGTGTGCCACAGTCTATGCCATTGGATATATCAGGTCCAACAACACCATCAGAACATGATGCACCCAATTCGCAATCTGCACATTCAGGTTTACAATGGACGGTTGTTGAACCAAATTATTCACGCTTTTCGCTGTCATCCTGTCCCACCAATTTAATTGGCAATAACAACAATCAAAACTCaaatacaaacaacaacaactcaagtactgaacaacaacaacaacagcatcgCCAGCAACAAGAGGTTGTTGCTaatcagcagcagcaacaacaacagcaacaacacttACAGCAATTACAACAATATCAGCACCAACAAAACTCTGCATATCCACCGCAAATTATAACGGTCAGCGGTTATACTAATGCTGCAGcagctgctgtagctgctgcgcAAAATTTATCACCGCCTTCGCCGAGTGACGGCAATATGGTGCAATCAGTATATAGCCAAGGACCAACTCCCACACAATCGCCTGTAGGTAATGCCTCGGGATCTGGCGGCGGCAGTAACATGTCCGCTGGCAATTCAGCCAATAATAATGCGAATATCAAACGCAAGCGTTCAGTTAATCCACAGggtgatgaaaattttataagggCTCTGGAGGCCGTACGTTCGGGTGGTATAGGTTTCTGTAAAGCAGCTCGACTGTATGGAGTTAACAATCGTACTTTATGGCTGGAGTATAAGAAACGTGGTTATCCTGTATCGAGGCCGAGTATAAAATCACGTGTAGTGAAACAAGAACCGAATCTCTCACCCTCTCCTACACCACCTGCTAACGCTACAGACGATACCAATGAGAATTACGATCATATGGCAGCTGCAGTGGCGGCTGCGCAAACCGCCGCTCTCAACATGCAAATACCACCGACTTCAGAAACACCAACGCCCTCGTTAATGTGCACAACTCATCACGCTGGTGCAACCGCTGGCGCTACCACACATCCCACAATGGGTGTTATGAGTTTCTTGGATACCCGCCACATGGACTTTCCAGCCAATCTGCATTCAATGTCCCGTCAACGATATATTGATGCCGGTACCGGCAGTGGGGCTAGTACGGGCACCATTAACGTTAATCCGGCAGCGGCAATGAATTTACAGagtattaattttaactcaATATAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSNDATELVGGGNNGQLGGNSSGGGSCAGGGGNTSTGGMGSSGGGSVSDSIWGSTESQFQQQQQHQQQQQHHQQLQQQQQHHHQQQQQQQQLHAQLQNSQTQTSQQQQQQHHQQQLRRTPSPLAAGTSPATRRKRLRKSSNNGSGERTNSEDHNTSLDAATAGGLTLSQMSQMSFSGAAANSALSGLTAHSLHTAKLLKEAANNDLETNPQDSDSLDEPHGHVHMQIKPEVDMSGVPQSMPLDISGPTTPSEHDAPNSQSAHSGLQWTVVEPNYSRFSLSSCPTNLIGNNNNQNSNTNNNNSSTEQQQQQHRQQQEVVANQQQQQQQQQHLQQLQQYQHQQNSAYPPQIITVSGYTNAAAAAVAAAQNLSPPSPSDGNMVQSVYSQGPTPTQSPVGNASGSGGGSNMSAGNSANNNANIKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKSRVVKQEPNLSPSPTPPANATDDTNENYDHMAAAVAAAQTAALNMQIPPTSETPTPSLMCTTHHAGATAGATTHPTMGVMSFLDTRHMDFPANLHSMSRQRYIDAGTGSGASTGTINVNPAAAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01397556;
- 90% Identity
- iTF_01236810;
- 80% Identity
- iTF_00435653;