Dcan022200.1
Basic Information
- Insect
- Dexiosoma caninum
- Gene Symbol
- -
- Assembly
- GCA_963924685.1
- Location
- OZ004729.1:18287582-18289432[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.9e-08 4.9e-05 23.7 0.0 8 40 396 428 394 431 0.88 2 4 2.6e-13 4.4e-10 39.8 0.0 5 44 447 486 444 487 0.90 3 4 0.021 34 5.0 0.0 27 38 516 527 512 533 0.88 4 4 1.1e-14 1.8e-11 44.3 0.0 4 41 555 592 555 594 0.92
Sequence Information
- Coding Sequence
- ATGAATCATTTAAAGTGGATGGGCCATTCGGCCACAATATTAGATATACATAAAAATCTGCGTGCCGATTTAAAGAGTTGTGAAGTAACGTTGGTAGGCAAGGGACACTGCGTTAAAGCCCATCGTTTTGTGCTGTCTTCCTGCAGTGATTTACTACGTTGTCTTCTAACTGATGTGCCCATTGGGCAGGAATGTTGTCTAATGATGCCCGACATTAAAGGTCATTTGCTGGATAACGTTTTAGCTTTTATATATTTAGGAGAGTGCTCTTTATCTTCTACGAATTTATCAGAGTTTTTAGAAGCCATTAATGTGTTGGGCATTAAAAGTGCAATAAGTTTTGAATGTAGTACAAATGCATTGCAGACAGCGCAAAATAGTAGTCATAACACCATAGCTATAGATGGCGATACAAGTATGGTTCCTGTAAGTAATAGTCTGGCAAATGCGCATGTAACCGTTGCGCCTTCAAACGATTCATTGCACCAGGAAGAAATAATTGAAGCTCAAAATGTAATCCATAATGAGGTGCACAACGAAGCGGAAGCCAATGCAAATAATTCTTCAGAAACTAGAGAACTGGATTTTTTAGATGTATATCATGAACCTCAGCATAAAATCACGTATTCAATAGAACATGTTCCAGGCTCTACAGCGggcaatgaatttattttaacggAAAACTCTGGCACTTTTACATTAACACATAGTGGTAAATTGGAACCTACCACTTCTCCCACAGAATCCAATATGGAAGTAGCTGAAGATGACGGTTGTGAATCACATATAATAGAAGAATACAGCAGCAGTGATGAGCCTCTAATACAAATTAGTGAAAATCCACAAGACCAACAAAGTGTAACAATAACTCAATCTATAACACAGCATCATCAACCCACATCACCGCTTATTTCCGCAGCGACTGCAACATCTATTATACAAGTAAAGCCGAAATTAAAAACCCTTAAACTTAAACATCCACAGCCAACTCAAAGAATAATAACTAAAATGGAACAACTTTCTGATGATACAGGAAGCAACGATCCCATATCAATATTGCAATCATCAAATGAAAGTTTTACTTTGCTTAAGGACGCTTCTTTAATATCTGCAGCAGTCAACACTACTCATGACGAGTCAAGAGATTTTTCTATGAACAACTCGGACGCATCTGCAACCGAGTTAGCCTATCAAGCAATGATCAATGAGGGAATGTCTTTGCCAAAGGCCGCCGACAAATTTAATGTTTCCAAAGCGGAGCTGTGGCGACGAGTACGTGGTACCGGAGTTGAACAGATCAACAAGTCAGTTAAAATCGATCCTGAAAAGATTGATGTCATAGAACTAGCTAGTAAGGCAGTAATAGACGAGGGCTTGTCGCTTCAAAAGGCCGCTATACGGTACGATATCTCTAAAACTGTGCTTTGGCGCAGGGTTCGTAAACATCCGCAATATATGAAGACCGCACGCGAAAATCCAATTATAACTAAGGCATATGAACGACTAAAATCTGGAGAATCACTAAAAAGCATATCACAAGATTTGGATATACCTATGTCTACACTGCACCGGCACAAAGTGCGTCTCTCGCAAACTGGTCAACTACCAGACTTTGTTACGTGCAAGAAACGTGATAGTATGTCAAAAGATGATCTCAAATTAAAACTGTCGAAGGCAGTTCATGCCTGCGTACATGAAGGAATGTCACAAAATCATGCCgctaatttatttcaaatttccaAAAGCACATTGTGGCGACATCTGCAAAAACGCGTTGCTGAAGCGGAAGCAGCTGAGACTGAATCTATGGGCGATGAGGATGAAATTAAACAAGAAGTAATTCTGTCGTAA
- Protein Sequence
- MNHLKWMGHSATILDIHKNLRADLKSCEVTLVGKGHCVKAHRFVLSSCSDLLRCLLTDVPIGQECCLMMPDIKGHLLDNVLAFIYLGECSLSSTNLSEFLEAINVLGIKSAISFECSTNALQTAQNSSHNTIAIDGDTSMVPVSNSLANAHVTVAPSNDSLHQEEIIEAQNVIHNEVHNEAEANANNSSETRELDFLDVYHEPQHKITYSIEHVPGSTAGNEFILTENSGTFTLTHSGKLEPTTSPTESNMEVAEDDGCESHIIEEYSSSDEPLIQISENPQDQQSVTITQSITQHHQPTSPLISAATATSIIQVKPKLKTLKLKHPQPTQRIITKMEQLSDDTGSNDPISILQSSNESFTLLKDASLISAAVNTTHDESRDFSMNNSDASATELAYQAMINEGMSLPKAADKFNVSKAELWRRVRGTGVEQINKSVKIDPEKIDVIELASKAVIDEGLSLQKAAIRYDISKTVLWRRVRKHPQYMKTARENPIITKAYERLKSGESLKSISQDLDIPMSTLHRHKVRLSQTGQLPDFVTCKKRDSMSKDDLKLKLSKAVHACVHEGMSQNHAANLFQISKSTLWRHLQKRVAEAEAAETESMGDEDEIKQEVILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00199788;
- 90% Identity
- iTF_00435760;
- 80% Identity
- iTF_00435760;