Basic Information

Gene Symbol
ct
Assembly
GCA_963924685.1
Location
OZ004726.1:87296697-87323473[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.8e-27 7.8e-23 81.0 0.0 3 72 645 715 643 720 0.94
2 3 7.3e-32 7.3e-28 97.1 0.0 3 77 1073 1148 1071 1150 0.96
3 3 7.5e-31 7.5e-27 93.9 0.0 3 77 1326 1401 1324 1403 0.96

Sequence Information

Coding Sequence
ATGAATATTAAAGAGGAAAAGAAACGAAGCAAAGCAATTCCTCTAACATACTTTAAGGCTTACAAGACTATAAAATTTCTCAAGattaaagCCTTATTTGAGGAAGTGAAACGTTTAAGAAGCGTAGAACAAACACATTTATTACGAATTCATCGTTTAGAGGAACATTTGGAAGCCAAACGCCAGCATATTATACATTTGGAATCGAAGCTGGATAAGCAGGAAGTTAATGAAGCTTTACAAGAGTCCCAGCAACAGCATAAACAACAGCGGGAAGATGATGATCTTGACAAAGATTGTGAAATGTTGGAAGTTAGTGAAACAACAGCCAACCAAGACAACGACGATGATGAAAATGAAActgaagtagaagaaattgTTAAAGATAGAAACTGTGATTTAACGCCACGACGCAACGAAAAACAACAACACGACGATGAAGATGAAGATGATGGTGacaatgatgatgacgatgatgacgtTGTACATGAGATTGTTAACCAAAATGAAAATGATGAAAATTCCCCTGAATTGGAGGAGTGTACAAATACTAAAGATTCCCTTAAAGATCTGCAAATCAAAAAGGAAACGCAatCACCTTTGTCGCTAGACTCAATTACCCAACAAAATGCGATTGCTGCAGCTGCTGCGGCCGCCGCTGCCTGCAATAATGACCCCAATAAATTCCAAGAATTATTAATGGAACGCACCAAAGCTTTGGTAGCCGCTGAAGCTTTAAAGAATACCGaagaCACTAATGTAGTTAACGAAGAGCCACAACGTTTAGATACAAATGATACTAATGTTGCTAGTTCAGACAGCAATAAAAAACAGGATGTTGAGGAACATGCTGAAAACTCAAAAGTGCCAAAAATTGAAATACTAGATGATGATGAGGATGAAGATGATGAAAATCCTAAATCGAATTTACTTGCGAGCGAAGATGTTACAGACAAAACGAATTTATGCGCCAGCATAGATTTAGATGTTTTGGAGACAACAGCCACCACGGAAGAAAAGCCACTGGAAGAAGATGAAGATTCAACAACATTTAAGCAAAATGTTGAACATTTTGGTACTTTGTTGGGTGAGGAATTGGTAAATTCGTACTGGCGCAGAGGTTTTGATCATTCAAAATCTTTGTATGCACATCAAAcccaacaacagcagcagcaacatctgcagcagcaacaacaacaacgctcgttgcagcagcagcagcagcagcaacatcacCAGCATCATCAGCATTTAATGTTGCAGCAGGCAAATGTCCATCATCGTCACCAACAGCCAATACAACATCACCATCAACAGCCTAACCAAACGCATTTATCACAACCACCATGTGGTCCCTCTTCGACCACCTTGCTTAGTCAATTAGTTAATTCTACTTTTTCCACTCCCAACTCTAATACTTCAACTCAATCCTCTTTACGTTCTTCAGATGGCTATACACACTCACAACCCGCTCcacatcatcaccatcatcatcagcatcaccACCTGCACCATCAAATGCCTGCCCATTTGGCCGAGCATCATGATAAGTCGTCACTTAATCATCATGATTCATCGGCTTCCAGTGCTAGTACACCCAACTTGCAGGAACAACGCAGCAGCGACGATCATCATAGTTTATCGTTGAACGGTTCACTTAAGAATTTGGAGGATAATAACAATAGTTTATGTGCTACGCCCACCAGTCATCATATGGGAGCTGGTCATCCCACACATTTGCCTCACGGCTTTTTGCCCGGTCTACCATTCCAATTCCAAGAACGTGGTCATTTTCGTTTTGCTGACGACTTGCAATTACCTCCCGGCACTTCGATGGCTGGCCGTTTGGGTGAGTCATTGATACCAAAGGGAGATCCCATGGAGGCCAAGCTGCAGGAAATGCTGCGCTACAATATGGACAAATATGCCAATCAGGCCTTGGATACGTTGCATATTTCACGGCGCGTCCGCGAACTGCTATCGGTGCACAATATAGGTCAGCGTATATTTGCGAAATATATTTTGGGTTTGTCTCAGGGCACCGTCTCCGAGTTGCTATCAAAGCCGAAACCCTGGGATAAGTTGACAGAGAAGGGGCGTGACAGTTATCGCAAAATGCATGCCTGGTCTTGTGATGATAATGCTGTTATGCTGCTCAAGTCTTTAATACCTAAAAAAGATTCCGGTTTACCGCCTTATGGCAGCGGTGGTCGTGATGATTCAATGTCTGATGAACGTTTGGCTCATATTTTAAATGAGGCATCTTCTTTAATCAAATCAAGTGGTTCCTCTTCAATGCATCAACAGCACGAGCATCAGCGAAGAGCTTCCACTATACCAGAAGATTCACGCAGTAATGATGATTCCAAGTCACCTCATCCACCCTGCTCGTCGCCATTCTTCAAAGAGCATCACAGCAAGTCTCAGGGTGAGACAGTTATGCCCGGTCAAGGACACATGCGTCCAGACGACATGAATCCTGAAAAAATGGCAAGACTATATCAAGAGCTAATGGCCAGGGCTCCCCGTGAAACTTTTCCAGGatttttactgTCACCCTTTTTCAGTGGAGGTTTACCGTCAGCAACTGGCATGGGTGCCAATGCCTTTCCCGGTTTGGCGGCCGATGAAAACATGCGCTTGGCTTTTGAGcgtgaaatgtcaaaattacaacagcagcagcaacagcatgcTGCCCAGCCTTCGAACTTTGCCAACTTCTCTAGTCTCATGGCTTTGCAGCAGCAAATGTTGAACGGTGCCCAGGATTTAAGTTTAACTACTGATGATAAAACGAaggacaacaacaaaattaatggCCAGCGCTGTTCATTTGAGAGTTCGCAGAACTCGCACAGCAATCATGGCCAGACAACACCCAACGCCAAAGATTCCAGCTCATCGGAAGTGGAAAGACTTTACCCGGGCATGCTAAAATCGGAACAGGGCAACAAAACTCCCGCTCCCTTGATTTCAAGTAATGCCTCTACCACAAATACGAATTCGGCTGCACCCAGTCCTCTCAGCAATTCCATACTCCCGCCTGCTATGACAACCAATGAAGAATTCTCCGCCACCGCCAGCCCTCTCCAAAGAATGGCCTCCATAACTAACTCGTTAATAACCCAGCCCCCTGTACCACCTCATCACAATCCCCCTCAAAGGCCCACAAAAGCCGTCTTGCCTCCCATTACCCAGCAGCAGTTCGATATGTTCAATAATCTCAATACCGAAGACATTGTGCGCCGTGTCAAAGAAGCTTTATCACAATATTCCATTTCGCAGCGTTTGTTCGGTGAATCTGTATTGGGTTTGTCTCAAGGTTCGGTATCGGATCTCTTAGCCAGACCCAAGCCCTGGCATATGCTTACCCAAAAAGGCCGAGAACCCTTTATACGCATGAAAATGTTTCTAGAAGATGAAAACGCTGTGCACAAACTTGTGGCTTCTCAGTATAAAATTGCTCCGGAAAAGTTAATGAGAACCGGCAACTACAGTGGTTCGCCACAAATTCCTCAGGGTTTGGCCAACAAAATGCAGGCTTCTTTGCCCATGCAAAAGATGATGAGCGAGCTGAAGCTGCAAGAACCAGCCCATATCATGCAACAAATGCAGGCTGCAGCCGTCATGTCCGCAGCCatgcaacaacatcaacaacagcaGGCGGCAGCAGTACAACAGAGTCAACACCAAGCAGCTCAAGCGGCTGTTCAAGCTGCCCAAGCTGCTGCCGCTGCCCAAGCAGCCCAGCATCACCAAAATATGCTGCTGACTTCGCCAGGTCTGCCGCCTCAGCACACTATTGCATTGCCCTCAGCCAGTTCTCAGCCAACGTCTGGCAATAGCACTCCAGCTGGCCCCACCCCAGATAAAAAACCCATGATGATGCCCATACATTCACCCCACCAAGGCAACGCCATGCGCAATATGCACCAACATATGTCACCCACCGTTTACGAAATGGCTGCTTTAACACAAGATTTGGACACTCAGGTTATCACCACCAAAATCAAGGAGGCCCTTTTGACCAACAACAttggccaaaaaatatttggagaAGCTGTTCTGGGCCTGTCCCAAGGTTCAGTGTCGGAATTGCTTAGCAAACCTAAGCCCTGGCATATGCTGTCCATTAAAGGACGTGAGCCTTTTATACGCATGCAACTGTGGCTGTCGGATGCCAACAATGTAGAACGTTTGCAGGTTTTAAAGAATGAACGTCGGGAGGCGTCGAAACGCCGGCGGTCCACAGGACCCAATCAACAAGACAATAGCTCGGACACTTCCAGTAACGATACTAATGATTTTTACACCAGCAGTCCTGGACCAGGCTCAGTGGGCAGCTCGGGAGCGCCTCCTAATAAGAAGCAGCGAGTCTTATTCTCCGAGGAACAAAAAGAAGCCTTAAGACTAGCATTTGCCTTAGACCCTTATCCGAACGTAGGAACCATTGAATTTTTGGCCAATGAATTGGGCTTAGCTACGCGCACGATCACCAATTGGTTCCACAATCATCGCATGCGTTTGAAACAACAAGTGCCTCATGGGCCCCCTGGTCAAGAAACCAATATACCCACTAGAGAAAATACCAATTCCACTCCTTTTGATCCCGTCCAGTTCCGCATTTTACTGCAACAAAGATTGCTGGAACTGCACAAGGAGCGCATGGGTTTAGGGGGTAATACACCCTTGCCGTATCCCCCTTATTTTGCAGCGGCTGCTTTATTGGGACGTTCTTTAGCAGGCATGCCAGGCACTAATGCACAAACTGCCCTGCCCACCAATGAGGCAGAGTTAAGGGCTCTCAATCAAGCCTTTAGAGAGCAAATGTCTGGCTTAGACTTGTCCATGAGCTCTTTGAAACGGGAACGCACCGATGACTTTGAAGATGACATGGACGAAAGCCACTTGTCGGAAAATGAAAACGATGATTTGGATGATGAGGACAAAACCAGCGACTATAGAAACTCAGTCCTGTCCAGCATGAATGCCCAACAGTTTTTGAATAATATGCGTTCGAACAGAAGAAAACCCGCCGCACCGCAATGGGTTAATCCGGCCGTGCCAAACGCCAATGAAGCTGAACGGATTATCAATGGTGTATGCGTGATGCAGGGCGAGGGAGACGAACAGCAACAAACTGCCCATCACGAGGATCTACATAAAACACTCGACCATGACGAAAATGACATGATAGAAGCGCCTCATCAATCAGTCATGGAGCCCGAAGTGGTAATCAAACAGGAAAAAGAAGACTGTGAAAGTGATAACGAAAAGACAAACACCGAGGACACTGCAGCAATGAATGAGGAACGAATTAAACTGGTACAGGAAGACAAGCTAAGAATGGTGCGTGTCAATCGCTTAAGCAGTGAAGACGAACCAATACCTACCGGCAATAACGCATCAGCAACAGCgtggaattattaa
Protein Sequence
MNIKEEKKRSKAIPLTYFKAYKTIKFLKIKALFEEVKRLRSVEQTHLLRIHRLEEHLEAKRQHIIHLESKLDKQEVNEALQESQQQHKQQREDDDLDKDCEMLEVSETTANQDNDDDENETEVEEIVKDRNCDLTPRRNEKQQHDDEDEDDGDNDDDDDDVVHEIVNQNENDENSPELEECTNTKDSLKDLQIKKETQSPLSLDSITQQNAIAAAAAAAAACNNDPNKFQELLMERTKALVAAEALKNTEDTNVVNEEPQRLDTNDTNVASSDSNKKQDVEEHAENSKVPKIEILDDDEDEDDENPKSNLLASEDVTDKTNLCASIDLDVLETTATTEEKPLEEDEDSTTFKQNVEHFGTLLGEELVNSYWRRGFDHSKSLYAHQTQQQQQQHLQQQQQQRSLQQQQQQQHHQHHQHLMLQQANVHHRHQQPIQHHHQQPNQTHLSQPPCGPSSTTLLSQLVNSTFSTPNSNTSTQSSLRSSDGYTHSQPAPHHHHHHQHHHLHHQMPAHLAEHHDKSSLNHHDSSASSASTPNLQEQRSSDDHHSLSLNGSLKNLEDNNNSLCATPTSHHMGAGHPTHLPHGFLPGLPFQFQERGHFRFADDLQLPPGTSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRIFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWSCDDNAVMLLKSLIPKKDSGLPPYGSGGRDDSMSDERLAHILNEASSLIKSSGSSSMHQQHEHQRRASTIPEDSRSNDDSKSPHPPCSSPFFKEHHSKSQGETVMPGQGHMRPDDMNPEKMARLYQELMARAPRETFPGFLLSPFFSGGLPSATGMGANAFPGLAADENMRLAFEREMSKLQQQQQQHAAQPSNFANFSSLMALQQQMLNGAQDLSLTTDDKTKDNNKINGQRCSFESSQNSHSNHGQTTPNAKDSSSSEVERLYPGMLKSEQGNKTPAPLISSNASTTNTNSAAPSPLSNSILPPAMTTNEEFSATASPLQRMASITNSLITQPPVPPHHNPPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGSPQIPQGLANKMQASLPMQKMMSELKLQEPAHIMQQMQAAAVMSAAMQQHQQQQAAAVQQSQHQAAQAAVQAAQAAAAAQAAQHHQNMLLTSPGLPPQHTIALPSASSQPTSGNSTPAGPTPDKKPMMMPIHSPHQGNAMRNMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLTNNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGPPGQETNIPTRENTNSTPFDPVQFRILLQQRLLELHKERMGLGGNTPLPYPPYFAAAALLGRSLAGMPGTNAQTALPTNEAELRALNQAFREQMSGLDLSMSSLKRERTDDFEDDMDESHLSENENDDLDDEDKTSDYRNSVLSSMNAQQFLNNMRSNRRKPAAPQWVNPAVPNANEAERIINGVCVMQGEGDEQQQTAHHEDLHKTLDHDENDMIEAPHQSVMEPEVVIKQEKEDCESDNEKTNTEDTAAMNEERIKLVQEDKLRMVRVNRLSSEDEPIPTGNNASATAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01109239;
90% Identity
iTF_00759983;
80% Identity
iTF_00435415;