Basic Information

Insect: Deroplatys truncata
Gene Symbol: L
Assembly: GCA_030765065.1
Location: CM060982.1:103955604-103984830[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.92 6.1e+02 4.0 1.0 14 23 78 87 73 87 0.90

2 14 8.5e-06 0.0057 19.8 0.2 1 23 93 115 93 115 0.98

3 14 7.5e-05 0.05 16.9 0.3 1 23 141 164 141 164 0.98

4 14 1.7 1.1e+03 3.2 0.1 3 23 195 217 193 217 0.81

5 14 0.0054 3.6 11.0 0.6 1 23 272 295 272 295 0.90

6 14 0.066 44 7.6 0.1 3 23 303 324 301 324 0.89

7 14 9.2 6.1e+03 0.9 0.1 9 23 377 391 374 391 0.76

8 14 0.00029 0.19 15.0 0.4 3 23 426 446 426 446 0.98

9 14 0.0066 4.4 10.7 0.2 3 23 456 477 454 477 0.93

10 14 0.0098 6.5 10.2 0.3 1 23 482 505 482 505 0.92

11 14 2.5 1.7e+03 2.7 2.0 1 23 561 583 561 583 0.88

12 14 0.0058 3.8 10.9 5.3 1 23 587 609 587 610 0.95

13 14 0.16 1e+02 6.4 1.8 3 23 672 694 671 695 0.92

14 14 0.0015 0.97 12.8 4.6 2 23 713 734 712 734 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.92	6.1e+02	4.0	1.0	14	23	78	87	73	87	0.90
2	14	8.5e-06	0.0057	19.8	0.2	1	23	93	115	93	115	0.98
3	14	7.5e-05	0.05	16.9	0.3	1	23	141	164	141	164	0.98
4	14	1.7	1.1e+03	3.2	0.1	3	23	195	217	193	217	0.81
5	14	0.0054	3.6	11.0	0.6	1	23	272	295	272	295	0.90
6	14	0.066	44	7.6	0.1	3	23	303	324	301	324	0.89
7	14	9.2	6.1e+03	0.9	0.1	9	23	377	391	374	391	0.76
8	14	0.00029	0.19	15.0	0.4	3	23	426	446	426	446	0.98
9	14	0.0066	4.4	10.7	0.2	3	23	456	477	454	477	0.93
10	14	0.0098	6.5	10.2	0.3	1	23	482	505	482	505	0.92
11	14	2.5	1.7e+03	2.7	2.0	1	23	561	583	561	583	0.88
12	14	0.0058	3.8	10.9	5.3	1	23	587	609	587	610	0.95
13	14	0.16	1e+02	6.4	1.8	3	23	672	694	671	695	0.92
14	14	0.0015	0.97	12.8	4.6	2	23	713	734	712	734	0.96

Sequence Information

Coding Sequence: ATGGGCAGGACGAAGGAAACGCAAGCCGAGCATGCGAGAGTTGACAAAATGACAGGCAGGAAGACAAACGAGGCCCGTCACGGTGAGGTGTTGCTTTCTCCTGACTGTCACTTGTTTACATCCGCAGGTCACCAGAGATCGCATCCCACATGTCCATCTTGTTTCTCAATCTCTCAAACAAATGAGCTGAGGAATTCTCCGCTGGAAAGAGATCCATCACTAAACAAAGACGACCACCTGAAGATCCATATGAAAACACATGACAACCAAAAGCCGTTCCAATGCACAGTGTGTAACAGGGGTTATAACACAGCAGCAGCCCTCACGTCACACATGCAGAACCACAAAAAGGATCAGAATGGGCAGCACAGCAACGGGGGGTCCAGCAACAACACGCCCAGTCCAGGGAACGCTTCTTCATTCCGGTGTCTACAATGTGGCGACTCGTTCCGCAAGCCCGAGGAGCTTCAGGGTCATATGATGACGCAACACCGTGTGGAAACTGGGAGCGGTGGTGGCAGCAGGGGTCTTCTTGGAGGACTCATGCTAGGAGAACCACCTTTCCCTACTCCCAAGTTGGCGTGCATGTACTGCACCAAGGACAGCTTCACCACTCTGGAAGCTCTACAGCTCCATGTTCAGGCCATGCACGGTTCTATACTGAATGGCGATATGCGGGAGTACCCCGGAGGCGGAGTGAGCCCGAGTCTGCCGCCCCATCACCTCCTGGCAGCCGCCGCCACAGCCTCCCCCAGCCCGAGCAGCACGGCGGCCCCAACGAGTACGGTGACATCCTCGGCCAGTTCTGTACCCTACTCTTGCGACTTGTGCACCATGCGCTTCTCTTCGCTTCCTGCCCTGCATAAACACTCGCTGGCGGTCCATGGGGGTGGTGCTGCCCTCTTTTGCTCTCAGTGCTCCCTCACCTTCCCTTCACCTGCTCTCTTCGCCGAACATTACGTCCTCATGCACGAGCAGGTGAAACCGACGGACCTCAGCAAGAAGTCTTCTTCGCCGTCGTCCTCCAGGTCTCACGACTCCAGGTCGCCACCCAAGAGGCACAAGTTGGATCCCAGTCTGCAACAGCCTGAGACGCCGACCTCACTGGGAGCCATGCCGTGCAGCGCCGCTCTGCCAGACTTCGAATCCTTCCGCACGCATCTCAAGTCGCACCTGGAGGAAGCGAATACTGGTGCAGGTGGCGGTCTACGAGGTCTCCTGGGAGGTAGCGGGGATCCCAACGTGGTCAAAGCCACCAGTCCCGGAACAGCAGGTTGTCCGCACTGTGGTGCCAAGTTCGAGGACCACACTGCCCTGGAGGCTCACATTGTGTCTCATTTCATGGCCACCGCTACCGAGTACGGCTGTCAGAGCTGTCTCAAGCTCTTCTCCAAGCCAGACGAGCTACAGAAACATCTCATGGACATCCATGCTCACCATCTGTACCGCTGTTCTCTCTGCAAGGAGATGTTCGACTCCAAGGTCGCCATCCAGGTGCACTTCGCAGTGAAACACAGCAACGAGTGCAAGTTGTTCCGCTGTACGGCATGTCCAGGACCTGCCGCCGTGTTTCGTTCAGAGCTGGACTTTGGACTACACGTCCGTTCCACGCATGCGCCGCCTCCACCGCCACCTCCGCTCAAGGCGCCTCCTCAACCACCTCCACCCCAGCCGCAGCCACATCGCTGCCTCTTCTGTCGTCTCAGCTTTTCCACGGAGCTGGAAATGCAGTTTCATCTCTCTGTCCACTCCAAGCAATTCCACTGTCCGCTGTGTCAGGAATCCTTCCACGTTGAGTTCCTGCTGGACAAGCACATGCAGACTCACCACAGCACCCAGGTGCTGAACGGCAGCAGTGGGGAGCAGCAGCCAcaaccaccacagcaacagcaaccaccacagcaacagcaacagAAGTCGCCGAAGAGCAAGAGTGCGCCGGCTCCTCCCACTCCCTGTTCCACTCCCACATCCAACCCTGGAAGCGGTAAGAAGTCCGATAGCGGTGGATGTTGCGACATCTGTGAACGGCGAGACTTCTCCAGCGAGGCAGAGCTCCAGGCGCATCGCAAGTTGGCCCACCACGTTCCCAAACCTAGCAAGGGTGGCAGTGGACAGGGCTCAACTGTCAGTCTACATTGTGCTTACTGCTCTGAGAACTGCAAGTCTAGAACTGAGCTGGAGAACCACATGAAGACTCATTCCCAGGTAGCATATTGA
Protein Sequence: MGRTKETQAEHARVDKMTGRKTNEARHGEVLLSPDCHLFTSAGHQRSHPTCPSCFSISQTNELRNSPLERDPSLNKDDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQNHKKDQNGQHSNGGSSNNTPSPGNASSFRCLQCGDSFRKPEELQGHMMTQHRVETGSGGGSRGLLGGLMLGEPPFPTPKLACMYCTKDSFTTLEALQLHVQAMHGSILNGDMREYPGGGVSPSLPPHHLLAAAATASPSPSSTAAPTSTVTSSASSVPYSCDLCTMRFSSLPALHKHSLAVHGGGAALFCSQCSLTFPSPALFAEHYVLMHEQVKPTDLSKKSSSPSSSRSHDSRSPPKRHKLDPSLQQPETPTSLGAMPCSAALPDFESFRTHLKSHLEEANTGAGGGLRGLLGGSGDPNVVKATSPGTAGCPHCGAKFEDHTALEAHIVSHFMATATEYGCQSCLKLFSKPDELQKHLMDIHAHHLYRCSLCKEMFDSKVAIQVHFAVKHSNECKLFRCTACPGPAAVFRSELDFGLHVRSTHAPPPPPPPLKAPPQPPPPQPQPHRCLFCRLSFSTELEMQFHLSVHSKQFHCPLCQESFHVEFLLDKHMQTHHSTQVLNGSSGEQQPQPPQQQQPPQQQQQKSPKSKSAPAPPTPCSTPTSNPGSGKKSDSGGCCDICERRDFSSEAELQAHRKLAHHVPKPSKGGSGQGSTVSLHCAYCSENCKSRTELENHMKTHSQVAY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -