Dtru084220.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Deroplatys truncata
Gene Symbol
zbtb8a.1-b
Assembly
GCA_030765065.1
Location
CM060987.1:80909440-80910759[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 9.1e-07 0.00061 22.9 2.4 1 23 15 37 15 37 0.98
2 11 3.8e-06 0.0025 21.0 0.0 1 23 43 66 43 66 0.97
3 11 2.4e-05 0.016 18.4 1.5 1 23 73 95 73 95 0.98
4 11 2.3e-07 0.00015 24.8 0.4 1 23 101 123 101 123 0.99
5 11 0.09 60 7.2 5.4 1 23 129 151 129 151 0.98
6 11 2.7e-06 0.0018 21.4 0.3 1 20 157 176 157 177 0.95
7 11 1.4 9.1e+02 3.5 4.4 1 23 186 206 186 206 0.90
8 11 2.5e-06 0.0017 21.5 1.7 1 23 212 234 212 234 0.96
9 11 2.6e-06 0.0018 21.4 2.4 1 23 240 262 240 262 0.96
10 11 0.0025 1.7 12.1 1.4 1 21 268 289 268 292 0.96
11 11 0.00028 0.19 15.1 0.6 1 22 298 319 298 319 0.93

Sequence Information

Coding Sequence
ATGACAAGTTCATCTGTTGGAAAAGATGGAAAGGAGAGGAACCACAAGTGTGAAACATGTACAAGAAGTTTTACAAATCGTGCTGATCTTGTAAAGCATTTACGAGTCCACAGTGGAGAGCGCCCGTATGTTTGCGGAGATTGTGGTGCAAAATTTACTCAGGCTGGTGGATTGCGGGCACATATCCTAAGCCGACATGATCCAGGAACTACATCATTTCATTGCAATTATTGTGGAAAGATTTTCCCTATAAAAGAGAGATTGCGGTTACATTTACGTGTACACACAGGTGAAAGACCATACTCTTGCAAggtgtgtaataaaacatttgcTCGTGGTGGACAGCTTGCTCAGCATATACGCACACACTCAAGTGCTAAGCCTCATAAGTGTGACCGTTGCTCAGCCACATTTTCATGTGTCACAAACCTAAAAATTCATCTTAAACGTCATCTTGGTCAGCTTGATCATGTCTGCCATGAATGTGGGAAAGCTTTTGTGCGCTTGGATGGTCTTAAAAAACATCTTGCATGCCTTCATGGTAATTTAAGACCTTTCCATTGTGCAGTATGCCGCAAGGATCTAAAAGGTCATCTTATGCAGCATCTACGAACCCATCTGCATGAAAAACCACATGCATGTTCTGAATGTAATGCAAGATTTGCACAGCGTTCTCAGCTGACAGTACATCGTCGTACTCATTCTGGAGACAAGCCATATCTGTGTCCAGTATGCCACAAGGCATTTGCCCATTCCACAGCTTTGAAACTACATTTGCGGCGCCATACTGGGGAAAAGCCCTTTCGCTGTCCTCTCTGCCCTGCCACAGCTTTTGTTCAACTTCCTCACCTAAAAAAGCATATGCGCTGTGTGCATAAAACAGATAAACCATATTTGTGCCTTGAATGTCGGAAATCTTTTAAAACTCGCTTGGATCTGGAAAATCATGAGCGAACCTCACCTGACTGTCTTCAGGCACGTCAACATGTTAAAACTGAGTCGTCAGCATCAAATTCAGACGTTCAGCCAGCAATGCCTGTGAATCGTATGAGAGTTCTTCTAGCAGTACTTTTGAAGAGAATTTCAACCCCAGCAAGACTGGAAGCTTTGGGATTTGGACGACGTCTCATTGATGATGTTCTCTGTGAGTCAATAGAGAGTTCTGGTCGAAAAGCCTGCTCAGACTTGGCAGATGAAGGTGAGCGTCTGCGTAAGAACATTGAAATATTACTGGATTGGACTGTTCCCAAGATATATATGGACCGTTTTAGACGTGAGAGTCGTTCAATTGAGGAACTGTTAGAGGAACTTACATCATGA
Protein Sequence
MTSSSVGKDGKERNHKCETCTRSFTNRADLVKHLRVHSGERPYVCGDCGAKFTQAGGLRAHILSRHDPGTTSFHCNYCGKIFPIKERLRLHLRVHTGERPYSCKVCNKTFARGGQLAQHIRTHSSAKPHKCDRCSATFSCVTNLKIHLKRHLGQLDHVCHECGKAFVRLDGLKKHLACLHGNLRPFHCAVCRKDLKGHLMQHLRTHLHEKPHACSECNARFAQRSQLTVHRRTHSGDKPYLCPVCHKAFAHSTALKLHLRRHTGEKPFRCPLCPATAFVQLPHLKKHMRCVHKTDKPYLCLECRKSFKTRLDLENHERTSPDCLQARQHVKTESSASNSDVQPAMPVNRMRVLLAVLLKRISTPARLEALGFGRRLIDDVLCESIESSGRKACSDLADEGERLRKNIEILLDWTVPKIYMDRFRRESRSIEELLEELTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00821194; iTF_01410955; iTF_00995631; iTF_00955796;
90% Identity
iTF_00821194;
80% Identity
-